EY735286

Overview
NameEY735286
Unique NameEY735286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SYNP6 (Glutamyl-tRNA reductase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=hemA PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.862e-26
Identity = 65/169 (38.46%), Postives = 108/169 (63.91%), Query Frame = 1
Query:   16 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG-VEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            A  R+L++GAGKM +L+++HL+AKG   + ++NR+  R   + ++  G ++I    LS +++   +AD+VFTST++  P+  +  ++ +   E  +    + IDI+VPRNV + V ++ +   YNVDDL+EVVA N+E R + A EA+A++ EE   F  W  SL+TVP
Sbjct:  189 AGQRVLILGAGKMSRLLVQHLIAKGADTIQILNRTLGRAEELAKQYGGDLQIQVGLLSGLMNAIVEADIVFTSTSATDPILDRAKLEMVLAPEQRL----MLIDIAVPRNVAADVVELTSVESYNVDDLREVVAQNQESRRKLAEEAEALLEEEVDAFDNWWQSLDTVP 353          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SYNE7 (Glutamyl-tRNA reductase OS=Synechococcus elongatus (strain PCC 7942) GN=hemA PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.862e-26
Identity = 65/169 (38.46%), Postives = 108/169 (63.91%), Query Frame = 1
Query:   16 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNG-VEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            A  R+L++GAGKM +L+++HL+AKG   + ++NR+  R   + ++  G ++I    LS +++   +AD+VFTST++  P+  +  ++ +   E  +    + IDI+VPRNV + V ++ +   YNVDDL+EVVA N+E R + A EA+A++ EE   F  W  SL+TVP
Sbjct:  189 AGQRVLILGAGKMSRLLVQHLIAKGADTIQILNRTLGRAEELAKQYGGDLQIQVGLLSGLMNAIVEADIVFTSTSATDPILDRAKLEMVLAPEQRL----MLIDIAVPRNVAADVVELTSVESYNVDDLREVVAQNQESRRKLAEEAEALLEEEVDAFDNWWQSLDTVP 353          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_PROM9 (Glutamyl-tRNA reductase OS=Prochlorococcus marinus (strain MIT 9312) GN=hemA PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.862e-26
Identity = 68/166 (40.96%), Postives = 106/166 (63.86%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL-FIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            ++LV+GAG+M +L+I HL AKGC K+++VNR+ +R   +  +   +EI+ K L+E+    + + +VFTSTASE P+       DL  +E      +L FIDI VPRN+ + V + +  + ++VDDL+EVV+ N+E R + A EA++++ EE   F  W  SLE VP
Sbjct:  193 KVLVVGAGRMSRLLITHLKAKGCHKLILVNRNIDRALNLAIDFPDIEIVCKGLNELDENISISSLVFTSTASEEPII------DLAKIEKLNLNNKLKFIDIGVPRNISNDVKNHQFVKSFDVDDLQEVVSRNQEFRQKIAKEAESLVEEERIIFLEWWASLEAVP 352          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_PROM0 (Glutamyl-tRNA reductase OS=Prochlorococcus marinus (strain MIT 9301) GN=hemA PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.862e-26
Identity = 68/165 (41.21%), Postives = 105/165 (63.64%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL-FIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +LV+GAG+M +L+I HL +KGC K++++NR+ +R   + ++   +EI+ K L+E+    + + +VFTSTASE P+       DL  +E      RL FIDI VPRN+ + V   E  + ++VDDL+EVV+ N+E R + A EA++++ EE   F  W  SLE VP
Sbjct:  194 VLVVGAGRMSRLLITHLKSKGCHKLILLNRNIDRALNLAQDFPDLEIVCKGLNELEENISLSSLVFTSTASEEPII------DLTKIEKINLSNRLKFIDIGVPRNISNDVKQHEFVKSFDVDDLQEVVSRNQEFRQKIAKEAESLVEEERIIFLEWWASLEAVP 352          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ANAVT (Glutamyl-tRNA reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=hemA PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.862e-26
Identity = 80/213 (37.56%), Postives = 125/213 (58.69%), Query Frame = 1
Query:   16 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVRINALSKMGEGILKKNKEGL-AMTLPVV 651
            A  R+ ++GAGKM +L+++HLV+KG T++ +VNRS ER   + ++ +   I    L EM++  A++ +VFTST++  P+  +     L  V A    L LF DISVPRNV + V ++   + +NVDDLK VVA N E R + A EA+ ++ EE + F  W  SLETV     + S     +  ++   ALS++G     K++E + A+T  +V
Sbjct:  181 AACRVTILGAGKMSRLLVQHLVSKGATQISIVNRSRERAQELAKQFSEHPIRTHLLPEMMTVIAESHLVFTSTSATEPILDR---AKLEMVLAPNQPLMLF-DISVPRNVHTDVNELANVQAFNVDDLKAVVAQNYESRRKMAQEAERLLEEEIEAFDIWWRSLETVSTISSLRSKIETIREQELE-KALSRLGSEFGDKHQEVIEALTRGIV 388          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ANASP (Glutamyl-tRNA reductase OS=Anabaena sp. (strain PCC 7120) GN=hemA PE=3 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.432e-26
Identity = 80/213 (37.56%), Postives = 125/213 (58.69%), Query Frame = 1
Query:   16 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVRINALSKMGEGILKKNKEGL-AMTLPVV 651
            A  R+ ++GAGKM +L+++HLV+KG T++ +VNRS ER   + ++ +   I    L EM++  A++ +VFTST++  P+  +     L  V A    L LF DISVPRNV + V ++   + +NVDDLK VVA N E R + A EA+ ++ EE + F  W  SLETV     + S     +  ++   ALS++G     K++E + A+T  +V
Sbjct:  181 AACRVTILGAGKMSRLLVQHLVSKGATQISIVNRSRERAQELAKQFSEHPIRTHLLPEMMTVIAESHLVFTSTSATEPILDR---AKLEMVLAPNQPLMLF-DISVPRNVHTDVNELVNVQAFNVDDLKAVVAQNYESRRKMAQEAERLLEEEIEAFDIWWRSLETVSTISSLRSKIETIREQELE-KALSRLGSEFGDKHQEVIEALTRGIV 388          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_PROMS (Glutamyl-tRNA reductase OS=Prochlorococcus marinus (strain AS9601) GN=hemA PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.419e-26
Identity = 66/165 (40.00%), Postives = 105/165 (63.64%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL-FIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +LV+GAG+M +L+I HL +KGC K++++NR+ +R   + ++   +EI+ + L+E+    + + +VFTSTASE P+       DL  +E      RL FIDI VPRN+ + V   +  + ++VDDL+EVV+ N+E R + A EA++++ EE   F  W  SLE VP
Sbjct:  194 VLVVGAGRMSRLLITHLKSKGCHKLILLNRNIDRALNLAQDFPDLEIVCRGLNELEENISLSSIVFTSTASEEPII------DLAKIEKLNLSNRLKFIDIGVPRNISNDVKQHQFVKSFDVDDLQEVVSRNQEFRQKIAKEAESLVEEERIIFLEWWASLEAVP 352          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_VIBSL (Glutamyl-tRNA reductase OS=Vibrio splendidus (strain LGP32) GN=hemA PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 7.077e-26
Identity = 71/169 (42.01%), Postives = 105/169 (62.13%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETV 516
            S A + +L++GAG+  +LV KHL A GCTKM+V NR+ ER   + EE  G E+I   L+E+      AD+V +STAS  P+  K  V+    ++       L +DI+VPR+V S V D+  A +Y+VDDL+ +V  N E R  +A++A+AI++EES  F +W  SL+ V
Sbjct:  177 SIAESTVLLVGAGETIELVAKHLSANGCTKMIVANRTRERALGLAEEF-GAEVI--SLNEIPDHLHRADIVISSTASPLPIIGKGMVETA--LKTRKHQPMLLVDIAVPRDVESQVGDLNDAYLYSVDDLQSIVDGNIEQRKVEAIQAEAIVSEESAAFMSWMRSLQAV 340          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SYNJA (Glutamyl-tRNA reductase OS=Synechococcus sp. (strain JA-3-3Ab) GN=hemA PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 7.077e-26
Identity = 77/221 (34.84%), Postives = 127/221 (57.47%), Query Frame = 1
Query:    4 ESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVR----INALSKMGEGILKKNKEGL-AMTLPVV 651
            + S +  ++ V+GAGKM +L+++HL+AKG   + VVNRS ER  A+ ++     I   P   +LS  A++++VFTST +  P+   + +  +   +  +    L +DISVPRN+   V  +   +V+NVD L  +V  N+  R + A+ A+A++ EE +QF  W  SLETVP    I SL  R++   +R      ALS++G+   +K+ E + A+T  +V
Sbjct:  177 QGSLSQGKVTVVGAGKMARLLVQHLLAKGAVDITVVNRSLERAEALAKQFEQ-PIQVLPWESLLSSIAESNLVFTSTGATQPILTYEQLAGVLQPDQPL----LLVDISVPRNIDPGVEKLRGVQVFNVDHLSRIVEENRAQRQKLALAAEALVEEEVEQFMEWWRSLETVP---TISSL--RHKVESIREQEMEKALSRLGKDFAEKHLEVIEALTRGIV 387          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SYNS3 (Glutamyl-tRNA reductase OS=Synechococcus sp. (strain CC9311) GN=hemA PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 8.884e-26
Identity = 65/167 (38.92%), Postives = 103/167 (61.68%), Query Frame = 1
Query:   19 TARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            T ++ V+GAG+M +L+++HL AKG + +V++NR+ ER +A+  +   + I  + L ++  C +   +VFTSTA + P+   + +  L    +    LRL IDI VPRN+ S V +V     ++VDDL+EVV  N+E R + A EA+ ++ EE + F  W DSLE VP
Sbjct:  191 TEQIAVVGAGRMSRLLLQHLQAKGASGVVLLNRTIERASALATDFPNLPIQCRGLDDLDQCLSTCSLVFTSTAVDDPIIDANRLNALNRRSS----LRL-IDIGVPRNIASDVHEVSGVESHDVDDLQEVVERNQEARQQVAREAEGLLLEEGRLFLEWWDSLEAVP 352          

HSP 2 Score: 21.1718 bits (43), Expect = 8.884e-26
Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  518 PTN*KLRAYAEEIRVGKL 571
            PT  +LRA  EEIRV +L
Sbjct:  352 PTINRLRASLEEIRVEEL 369          
The following BLAST results are available for this feature:
BLAST of EY735286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
HEM1_SYNP61.862e-2638.46Glutamyl-tRNA reductase OS=Synechococcus sp. (stra... [more]
HEM1_SYNE71.862e-2638.46Glutamyl-tRNA reductase OS=Synechococcus elongatus... [more]
HEM1_PROM91.862e-2640.96Glutamyl-tRNA reductase OS=Prochlorococcus marinus... [more]
HEM1_PROM01.862e-2641.21Glutamyl-tRNA reductase OS=Prochlorococcus marinus... [more]
HEM1_ANAVT1.862e-2637.56Glutamyl-tRNA reductase OS=Anabaena variabilis (st... [more]
HEM1_ANASP2.432e-2637.56Glutamyl-tRNA reductase OS=Anabaena sp. (strain PC... [more]
HEM1_PROMS5.419e-2640.00Glutamyl-tRNA reductase OS=Prochlorococcus marinus... [more]
HEM1_VIBSL7.077e-2642.01Glutamyl-tRNA reductase OS=Vibrio splendidus (stra... [more]
HEM1_SYNJA7.077e-2634.84Glutamyl-tRNA reductase OS=Synechococcus sp. (stra... [more]
HEM1_SYNS38.884e-2638.92Glutamyl-tRNA reductase OS=Synechococcus sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735286 ID=EY735286; Name=EY735286; organism=Citrus sinensis; type=EST; length=972bp
CCTGAATCTTCACATGCCACTGCCCGGATGTTGGTTATTGGAGCAGGCAA
GATGGGGAAGCTTGTGATAAAACACTTGGTAGCCAAAGGATGCACTAAGA
TGGTGGTTGTAAACAGGTCAGAAGAGAGAGTTGCAGCCATCTGCGAGGAG
CTCAACGGTGTTGAGATAATTTATAAACCTCTCTCAGAAATGTTGTCCTG
TGCTGCTGATGCAGATGTGGTCTTCACCAGCACAGCATCTGAAGCTCCAT
TATTCTTGAAGGATCATGTTCAGGACCTTCCTCCCGTTGAGGCTGCAGTT
GGGGGTTTGAGGCTCTTTATTGATATCTCCGTTCCTCGTAATGTGGGCTC
TTGTGTTGCAGATGTTGAAACTGCACGGGTTTACAATGTTGATGACCTTA
AGGAGGTAGTGGCTGCTAATAAAGAGGACAGGCTCCGAAAAGCAATGGAA
GCTCAGGCTATTATCACTGAGGAATCAAAACAGTTTGCAGCTTGGAGGGA
TTCATTGGAGACTGTTCCCTACTAATTAGAAATTGAGAGCTTATGCTGAA
GAAATCAGGGTGGGCAAGTTAGAATAAATGCCCTATCAAAAATGGGTGAA
GGAATCCTCAAAAAAAACAAGGAGGGGCTGGCAATGACCTTACCCGTGGT
AATCAGGAATAACCTTCTTTCTGGGGCCCAATGGCACCCTTTGGAAATGG
GGGGGGAATGGAAGCAGGGATTCTAAAGAAAACCCTTGGAAAACTGGGCT
GGCTTAAAAAAAAAAGGGTTGGGCCTTGAAAAAAAAAAACATTTCTCTTT
TCCAAAGAAAAAGGGGTCGGGCGCAAAAAAAAAAAAAAAACCCCAAAAGG
GGGGACTTTTTTGAAAAACAAGGTTTTGTGCAAAGGGGGACCTTTCTTTT
TTCCCTTTCCCCCAAAATAGTAAAAAAAAAAAAAAAAAAAACCCCCTCCC
CCCCCCTTTGTTGTGGGGTGGT
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