EY735286

Overview
NameEY735286
Unique NameEY735286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_BURA4 (Glutamyl-tRNA reductase OS=Burkholderia ambifaria (strain MC40-6) GN=hemA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.643e-14
Identity = 52/169 (30.77%), Postives = 83/169 (49.11%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            R+L IGAG+M +L   H  A+   ++V+ NR+ ER   + E  NG  +   PLS++ +   + D++ + TAS  P+        L  VE AV   R      +D++VPR++   V  ++   +Y VDDL  +V      R     +A+ II    + F  W D+   VP
Sbjct:  189 RVLFIGAGEMIELCATHFAAQSPRELVIANRTAERGQRLAERFNGRAM---PLSDLPTRMHEFDIIVSCTASTLPII------GLGAVERAVKARRHRPIFMVDLAVPRDIEPEVGKLKDVFLYTVDDLGAIVREGNASRQAAVAQAETIIETRVQNFMQWLDTRSVVP 348          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_METKA (Glutamyl-tRNA reductase OS=Methanopyrus kandleri GN=hemA PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.758e-14
Identity = 49/149 (32.89%), Postives = 82/149 (55.03%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEE 474
            +LV+GAG+MGK V K LV +G   ++V NR+ ER   +  +L G  + +    E++   A +DVV ++TA+  P+   D V++          + L IDI+ PR+V   V ++E   V  +DDL+ +   N E R ++  + + +I EE
Sbjct:  170 VLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRF---DELVDHLARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPI-LIIDIANPRDVEEGVENIEDVEVRTIDDLRVIARENLERRRKEIPKVEKLIEEE 314          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_CAMJ8 (Glutamyl-tRNA reductase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=hemA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.758e-14
Identity = 53/168 (31.55%), Postives = 88/168 (52.38%), Query Frame = 1
Query:   16 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            A  + +VIGAG+MG+L  KHL+A G  K++++NR  ++   +CE L GV   Y  L  +       +  F++T +   +     +++LP         R F DI+VPR++   + + E   V+ VDDL+ VV  N   R ++A  A  II  E+ +F  + + L  +P
Sbjct:  178 AQKKAVVIGAGEMGELAAKHLIAAG-AKVIILNRDLQKAKDLCERL-GVLSEYDSLENLKKYLNQYEFFFSATNAPNAIITNSLIEELP-------YKRYFFDIAVPRDID--INENENISVFAVDDLENVVQKNLALREQEARMAYGIIGRETSEFFRYLNDLALMP 334          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_NITEC (Glutamyl-tRNA reductase OS=Nitrosomonas eutropha (strain C91) GN=hemA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.214e-14
Identity = 66/217 (30.41%), Postives = 105/217 (48.39%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVRINALSKMGEGILKKNKEGLAMTLPVVIRNNLLSG 675
            ++L IGAG+M +L   H VAK    + V NR+ ER  A+    N   I    L + L+     D+V TSTAS  P+  K  ++    ++         +D++VPR+V   VA+++   +Y VDDL ++V    + R     +A+ II      F  W  +  +VP    I +L  R+Q  Q R + LS+    +L K ++      PV +  +L SG
Sbjct:  180 KVLFIGAGEMIELCAAHFVAKRPVHVTVANRTVERAEALSRRFNAHPISLGELPDQLALH---DIVVTSTASPLPILGKGMLERA--IKLRKHRPIFIVDLAVPRDVEPEVAELDDVFLYYVDDLADIVREGLDSRQGAVTQAETIIDSNVMDFMHWVATRRSVP---TIRAL--RDQAEQFRQHELSR-AHKLLAKGED------PVKVLESLSSG 379          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_LISW6 (Glutamyl-tRNA reductase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=hemA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.214e-14
Identity = 44/165 (26.67%), Postives = 86/165 (52.12%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +++++GAG+M +L +++L   G   + ++NR++     + ++       Y+ ++  LS A   D+V  ST+++ P+  +  +Q L   ++      L IDI +PRNV    + +    +Y++DDL  VV+AN  +R +  +  +  I  E + F  W   L  VP
Sbjct:  184 KIVLVGAGEMSELALQNLAGSGIADITIINRTKANAEILADQFQAKVGTYEEMNNYLSIA---DIVLVSTSADEPIIKQKDMQILMSQKSTS---MLVIDIGLPRNVEHDCSYIPNFHLYDIDDLAGVVSANSLERQKIVLALENTIETEVQNFFEWEKQLGVVP 342          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ACTPJ (Glutamyl-tRNA reductase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=hemA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.214e-14
Identity = 49/157 (31.21%), Postives = 83/157 (52.87%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            R L++GAG+  +LV ++L+  G   +++ NR+ +R   + E LN    I   LS +      AD+V +ST S   L  K+ V+ +   +     + L IDI+VPR++     +++    Y+VDDL+ ++  N   R + A +A  I+ EE K F  W
Sbjct:  198 RFLLVGAGETIELVARYLIQHGAKNIMIANRTPQRAETLAERLNTPMQILS-LSALQIGLNQADIVISSTGSPDMLISKEMVE-IAQKQRQFDPM-LLIDIAVPRDIDENAGELDAVYSYSVDDLQHIIQRNMAQREQAAEQAAQIVDEECKAFFEW 351          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ACTP7 (Glutamyl-tRNA reductase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=hemA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.214e-14
Identity = 49/157 (31.21%), Postives = 83/157 (52.87%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            R L++GAG+  +LV ++L+  G   +++ NR+ +R   + E LN    I   LS +      AD+V +ST S   L  K+ V+ +   +     + L IDI+VPR++     +++    Y+VDDL+ ++  N   R + A +A  I+ EE K F  W
Sbjct:  198 RFLLVGAGETIELVARYLIQHGAKNIMIANRTPQRAETLAERLNTPMQILS-LSALQIGLNQADIVISSTGSPDMLISKEMVE-IAQKQRQFDPM-LLIDIAVPRDIDENAGELDAVYSYSVDDLQHIIQRNMAQREQAAEQAAQIVDEECKAFFEW 351          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ACTP2 (Glutamyl-tRNA reductase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=hemA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.214e-14
Identity = 49/157 (31.21%), Postives = 83/157 (52.87%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            R L++GAG+  +LV ++L+  G   +++ NR+ +R   + E LN    I   LS +      AD+V +ST S   L  K+ V+ +   +     + L IDI+VPR++     +++    Y+VDDL+ ++  N   R + A +A  I+ EE K F  W
Sbjct:  198 RFLLVGAGETIELVARYLIQHGAKNIMIANRTPQRAETLAERLNTPMQILS-LSALQIGLNQADIVISSTGSPDMLISKEMVE-IAQKQRQFDPM-LLIDIAVPRDIDENAGELDAVYSYSVDDLQHIIQRNMAQREQAAEQAAQIVDEECKAFFEW 351          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_PSEU2 (Glutamyl-tRNA reductase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=hemA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 8.116e-14
Identity = 62/217 (28.57%), Postives = 110/217 (50.69%), Query Frame = 1
Query:   22 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVRINALSKMGEGILK-KNKEGLAMTLPVVIRNNLL 669
            ++ L+IGAG+   LV +HL   G  ++VV NR+ ER + +  E     ++   LS++ +   ++D+V +STAS+ P+  K  V+    ++         +DI+VPR++   V +++   +Y+VDDL EVVA N + R   A+ A+ +++  ++ F +    L  V           R Q  ++R   LSK    +    N E + + L   + N LL
Sbjct:  181 SQALLIGAGETITLVARHLHDLGVKRIVVANRTLERASMLAAEFGAHAVL---LSDIPAELVNSDIVISSTASQLPILGKGAVESA--LKLRKHKPIFMVDIAVPRDIEPEVGELDDVYLYSVDDLHEVVAENLKSRQGAALAAEQLVSVGAEDFMSRLRELAAVDV-----LRAYRQQSERLRDEELSKAQRMLANGSNAEDVLIQLARGLTNKLL 387          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_PSESM (Glutamyl-tRNA reductase OS=Pseudomonas syringae pv. tomato GN=hemA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 8.116e-14
Identity = 62/217 (28.57%), Postives = 110/217 (50.69%), Query Frame = 1
Query:   22 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVRINALSKMGEGILK-KNKEGLAMTLPVVIRNNLL 669
            ++ L+IGAG+   LV +HL   G  ++VV NR+ ER + +  E     ++   LS++ +   ++D+V +STAS+ P+  K  V+    ++         +DI+VPR++   V +++   +Y+VDDL EVVA N + R   A+ A+ +++  ++ F +    L  V           R Q  ++R   LSK    +    N E + + L   + N LL
Sbjct:  181 SQALLIGAGETITLVARHLHDLGVKRIVVANRTLERASILAAEFGAHAVL---LSDIPAELVNSDIVISSTASQLPILGKGAVESA--LKLRKHKPIFMVDIAVPRDIEPEVGELDDVYLYSVDDLHEVVAENLKSRQGAALAAEQLVSVGAEDFMSRLRELAAVDV-----LRAYRQQSERLRDEELSKAQRMLANGSNAEDVLIQLARGLTNKLL 387          
The following BLAST results are available for this feature:
BLAST of EY735286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
HEM1_BURA43.643e-1430.77Glutamyl-tRNA reductase OS=Burkholderia ambifaria ... [more]
HEM1_METKA4.758e-1432.89Glutamyl-tRNA reductase OS=Methanopyrus kandleri G... [more]
HEM1_CAMJ84.758e-1431.55Glutamyl-tRNA reductase OS=Campylobacter jejuni su... [more]
HEM1_NITEC6.214e-1430.41Glutamyl-tRNA reductase OS=Nitrosomonas eutropha (... [more]
HEM1_LISW66.214e-1426.67Glutamyl-tRNA reductase OS=Listeria welshimeri ser... [more]
HEM1_ACTPJ6.214e-1431.21Glutamyl-tRNA reductase OS=Actinobacillus pleuropn... [more]
HEM1_ACTP76.214e-1431.21Glutamyl-tRNA reductase OS=Actinobacillus pleuropn... [more]
HEM1_ACTP26.214e-1431.21Glutamyl-tRNA reductase OS=Actinobacillus pleuropn... [more]
HEM1_PSEU28.116e-1428.57Glutamyl-tRNA reductase OS=Pseudomonas syringae pv... [more]
HEM1_PSESM8.116e-1428.57Glutamyl-tRNA reductase OS=Pseudomonas syringae pv... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735286 ID=EY735286; Name=EY735286; organism=Citrus sinensis; type=EST; length=972bp
CCTGAATCTTCACATGCCACTGCCCGGATGTTGGTTATTGGAGCAGGCAA
GATGGGGAAGCTTGTGATAAAACACTTGGTAGCCAAAGGATGCACTAAGA
TGGTGGTTGTAAACAGGTCAGAAGAGAGAGTTGCAGCCATCTGCGAGGAG
CTCAACGGTGTTGAGATAATTTATAAACCTCTCTCAGAAATGTTGTCCTG
TGCTGCTGATGCAGATGTGGTCTTCACCAGCACAGCATCTGAAGCTCCAT
TATTCTTGAAGGATCATGTTCAGGACCTTCCTCCCGTTGAGGCTGCAGTT
GGGGGTTTGAGGCTCTTTATTGATATCTCCGTTCCTCGTAATGTGGGCTC
TTGTGTTGCAGATGTTGAAACTGCACGGGTTTACAATGTTGATGACCTTA
AGGAGGTAGTGGCTGCTAATAAAGAGGACAGGCTCCGAAAAGCAATGGAA
GCTCAGGCTATTATCACTGAGGAATCAAAACAGTTTGCAGCTTGGAGGGA
TTCATTGGAGACTGTTCCCTACTAATTAGAAATTGAGAGCTTATGCTGAA
GAAATCAGGGTGGGCAAGTTAGAATAAATGCCCTATCAAAAATGGGTGAA
GGAATCCTCAAAAAAAACAAGGAGGGGCTGGCAATGACCTTACCCGTGGT
AATCAGGAATAACCTTCTTTCTGGGGCCCAATGGCACCCTTTGGAAATGG
GGGGGGAATGGAAGCAGGGATTCTAAAGAAAACCCTTGGAAAACTGGGCT
GGCTTAAAAAAAAAAGGGTTGGGCCTTGAAAAAAAAAAACATTTCTCTTT
TCCAAAGAAAAAGGGGTCGGGCGCAAAAAAAAAAAAAAAACCCCAAAAGG
GGGGACTTTTTTGAAAAACAAGGTTTTGTGCAAAGGGGGACCTTTCTTTT
TTCCCTTTCCCCCAAAATAGTAAAAAAAAAAAAAAAAAAAACCCCCTCCC
CCCCCCTTTGTTGTGGGGTGGT
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