EY735286

Overview
NameEY735286
Unique NameEY735286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_XANAC (Glutamyl-tRNA reductase OS=Xanthomonas axonopodis pv. citri GN=hemA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.361e-13
Identity = 55/188 (29.26%), Postives = 97/188 (51.60%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVRINALSK 591
            +L+IGAG+  +L  KHL      ++++ NR+      +  +  G  +   PL+++    A+ADVVF++TA+  PL  +  V+    + A      L  D++VPR++ + V ++  A +Y VDDL+  V  N+  R   A +A+AII     Q A + ++L+   +   ++ L  R  G   R   L+K
Sbjct:  177 VLLIGAGETIELAAKHLSEGRVRRLLIANRTLAHAQTLASQHGGFAL---PLTDLERHLAEADVVFSATAAREPLVTRVQVEQA--LRARKRKPMLLFDLAVPRDIEASVGELSDAYLYTVDDLERAVEDNRRGRREAADQAEAII---DLQVARYVETLQATAHQAPLKRL--RAFGDSTRDELLAK 354          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_NITEU (Glutamyl-tRNA reductase OS=Nitrosomonas europaea GN=hemA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.361e-13
Identity = 57/189 (30.16%), Postives = 96/189 (50.79%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVRINALSK 591
            ++L IGAG+M +L   H VA+    + V NR+ ER  A+    N   I    L + L+     D+V TSTAS  P+  K  ++    ++         +D++VPR+V + VA+++   +Y VDDL ++V    ++R     +A+ II      F  W  + ++VP    I +L  RNQ  + R + L++
Sbjct:  180 KVLFIGAGEMIELCAAHFVARHPVHVTVANRTVERAEALARRFNAHPISLGELPDQLALH---DIVVTSTASPLPILGKGMLERA--IKQRKHRPVFIVDLAVPRDVEAEVAELDDVFLYYVDDLADIVKEGLDNRQGAVTQAETIIESNVVDFMHWVATRQSVP---TIRAL--RNQAERYRRHELAR 358          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_META3 (Glutamyl-tRNA reductase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=hemA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.361e-13
Identity = 52/176 (29.55%), Postives = 91/176 (51.70%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEE----SKQFAAWRDSLETVPY*LEIESL 543
            +LV+GAG++  LV K L+ K    +VV NR+ ER   + ++LNG+ + +  L E ++     D++  +T +   +  KD +++       + G ++ IDI+ PR+V   V ++   ++Y +DDLK V   N + R  +    + II EE    +KQ    +       Y L IE+L
Sbjct:  157 ILVVGAGEIATLVAKALIEKNIRAIVVSNRTYERAELLAKKLNGMAVHFDKLGEAINY---NDIIICATGAPHAIIDKDRLKN-------IKGYKVLIDIANPRDVSDDVMELPNIKLYTIDDLKMVSEENLKKRKDEIPRVEKIIEEELSVLTKQLRKLKFENTIKNYDLYIENL 322          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_EXISA (Glutamyl-tRNA reductase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=hemA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.361e-13
Identity = 52/170 (30.59%), Postives = 88/170 (51.76%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR-----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +++V+GAG+ G+L   +L   G  ++ V NR+E +  A+ ++  G       + E+     DAD++ +ST ++  +   D V       AA   LR     L IDI+VPR++   VA +    +++VDDL  +V  N E RL +A + +  I E  ++F  W  +L  VP
Sbjct:  184 QVVVVGAGETGELTTLNLFEAGAKQIAVFNRTESKAKAVADKFKGRA---HSIREIACGLLDADILISSTGAKEAVIGYDDV-------AAAQLLRRERPLLLIDIAVPRDIDPAVATLPGVHLFDVDDLNGIVNKNLEARLVEAEKIEMKIDEAIQEFQTWLVTLGVVP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_CHLPD (Glutamyl-tRNA reductase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=hemA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.361e-13
Identity = 49/184 (26.63%), Postives = 93/184 (50.54%), Query Frame = 1
Query:    7 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTA------SEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIES 540
            S+ +  ++L+IGAG+ G+L  KH+  K    +V+ NR+  +  A+ EEL   +++  P         + D++ T+ +      SEA +      + L PV        + +D+ +PRNV   +A ++   + ++D LK ++  N E R  +  +  AII EE   F  W ++L+  P  ++++S
Sbjct:  178 SNLSMKKILLIGAGETGELAAKHMFQKNARNIVITNRTLSKAEALAEELGTKKVL--PFESYKDYLHEFDIIITAVSTKEYVLSEAEMHQTMMKRRLKPV--------IILDLGLPRNVDPDIAKLQNMFLKDIDALKHIIDKNLERRSAELPKVNAIIEEELIAFGQWINTLKVRPTIVDLQS 351          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_CHLPB (Glutamyl-tRNA reductase OS=Chlorobium phaeobacteroides (strain BS1) GN=hemA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.361e-13
Identity = 47/182 (25.82%), Postives = 97/182 (53.30%), Query Frame = 1
Query:    7 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL----FIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIES 540
            S+ +  ++L++GAG+ G+L  KH+  K    +V+ NR+  +  A+ EEL   +++  P         + D++ T+ +S      K++V   P ++ ++   RL     +D+ +PRNV   + +++   + ++D LK ++  N E R  +  + + II EE   FA W ++L+  P  ++++S
Sbjct:  178 SNLSIKKILLVGAGETGELAAKHMFQKNARNIVITNRTLSKAEALAEELGTNQVL--PYESYKDHLHEFDIIITAVSS------KEYVLTEPELQQSMQKRRLKPVIILDLGLPRNVDPEIGNLKNMFLKDIDALKHIIDKNLEMRKCELPKVKKIIDEELVGFAQWINTLKVRPTIVDLQS 351          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_JANMA (Glutamyl-tRNA reductase OS=Janthinobacterium sp. (strain Marseille) GN=hemA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.084e-13
Identity = 52/168 (30.95%), Postives = 80/168 (47.62%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +L IGAG+M +L   H  A+    + + NR+ ER   +    NG  I    L + L   A  D+V +STAS  P+        L  VE A+   R      +D++VPR++ + +  ++   +Y VDDL   V    E+R     +A+AII    + F  W D+   VP
Sbjct:  195 VLFIGAGEMIELSATHFAAQNPKSVTIANRTLERGQTLAHRFNGKAIRLADLPDQL---ASYDIVISSTASSLPII------GLGMVERAIKARRHKPMFMVDLAVPRDIEAEIGRLDDVFLYTVDDLGSFVQTGVENRQAAVAQAEAIIETRVRSFMHWIDARAVVP 353          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_DEIGD (Glutamyl-tRNA reductase OS=Deinococcus geothermalis (strain DSM 11300) GN=hemA PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 3.084e-13
Identity = 58/165 (35.15%), Postives = 86/165 (52.12%), Query Frame = 1
Query:    4 ESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            E  H TA  L++GAG+  +L + HL A G   ++VVNR+E R   + ++L G     + L E+L    +ADVV  S+A  AP ++  H + +    A      +F IDISVPR +   +  V  A +YN+DDL  +V+ N + R      A+AII E       W
Sbjct:  175 ELRHRTA--LILGAGETAELTLTHLRAAGVQDVIVVNRTEARARQLADKLGGRACAAEYLHEVLP---EADVVIASSA--APHYVL-HGEGVRAALAKRPERPIFLIDISVPRILDPDIRAVSGAHLYNLDDLTAIVSRNLQSRRAALPYAEAIIREAVADLLRW 331          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_CAMC1 (Glutamyl-tRNA reductase OS=Campylobacter concisus (strain 13826) GN=hemA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.084e-13
Identity = 47/152 (30.92%), Postives = 88/152 (57.89%), Query Frame = 1
Query:   31 LVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQF 486
            +V+GAG+MG+L  KHL++ G  +++++NRS ERV  + + L G    +  + ++     + D++F+STA+   +   + ++   P E      R F DI+VPR++   + + E   VY VD L+E+V  N   R  +A +A +I+ +++ +F
Sbjct:  187 IVVGAGEMGELAAKHLISSG-AEVIIINRSSERVEQLVDSL-GDNASWDSILKLKEYVNNYDLIFSSTAAPHAIITGEIIE---PREFH----RYFFDIAVPRDID--LLNTELISVYTVDSLEEIVRKNLALREEQAQKAYSIVGQDTSEF 327          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_XANCH (Glutamyl-tRNA reductase OS=Xanthomonas campestris pv. phaseoli GN=hemA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 4.028e-13
Identity = 46/146 (31.51%), Postives = 80/146 (54.79%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAII 465
            +L+IGAG+  +L  KHL      ++++ NR+      +  +  G  +   PL+++    A+ADVVF++TA+  PL  +  V+    + A      L  D++VPR++ + V ++  A +Y VDDL+  V  N+  R   A +A+AII
Sbjct:  177 VLLIGAGETIELAAKHLSEGRVRRLLIANRTLAHAQTLASQHGGFAL---PLTDLERHLAEADVVFSATAAREPLVTRAQVEQA--LRARKRKPMLLFDLAVPRDIEASVGELSDAYLYTVDDLERAVEDNRRGRREAADQAEAII 317          
The following BLAST results are available for this feature:
BLAST of EY735286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
HEM1_XANAC2.361e-1329.26Glutamyl-tRNA reductase OS=Xanthomonas axonopodis ... [more]
HEM1_NITEU2.361e-1330.16Glutamyl-tRNA reductase OS=Nitrosomonas europaea G... [more]
HEM1_META32.361e-1329.55Glutamyl-tRNA reductase OS=Methanococcus aeolicus ... [more]
HEM1_EXISA2.361e-1330.59Glutamyl-tRNA reductase OS=Exiguobacterium sp. (st... [more]
HEM1_CHLPD2.361e-1326.63Glutamyl-tRNA reductase OS=Chlorobium phaeobactero... [more]
HEM1_CHLPB2.361e-1325.82Glutamyl-tRNA reductase OS=Chlorobium phaeobactero... [more]
HEM1_JANMA3.084e-1330.95Glutamyl-tRNA reductase OS=Janthinobacterium sp. (... [more]
HEM1_DEIGD3.084e-1335.15Glutamyl-tRNA reductase OS=Deinococcus geothermali... [more]
HEM1_CAMC13.084e-1330.92Glutamyl-tRNA reductase OS=Campylobacter concisus ... [more]
HEM1_XANCH4.028e-1331.51Glutamyl-tRNA reductase OS=Xanthomonas campestris ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735286 ID=EY735286; Name=EY735286; organism=Citrus sinensis; type=EST; length=972bp
CCTGAATCTTCACATGCCACTGCCCGGATGTTGGTTATTGGAGCAGGCAA
GATGGGGAAGCTTGTGATAAAACACTTGGTAGCCAAAGGATGCACTAAGA
TGGTGGTTGTAAACAGGTCAGAAGAGAGAGTTGCAGCCATCTGCGAGGAG
CTCAACGGTGTTGAGATAATTTATAAACCTCTCTCAGAAATGTTGTCCTG
TGCTGCTGATGCAGATGTGGTCTTCACCAGCACAGCATCTGAAGCTCCAT
TATTCTTGAAGGATCATGTTCAGGACCTTCCTCCCGTTGAGGCTGCAGTT
GGGGGTTTGAGGCTCTTTATTGATATCTCCGTTCCTCGTAATGTGGGCTC
TTGTGTTGCAGATGTTGAAACTGCACGGGTTTACAATGTTGATGACCTTA
AGGAGGTAGTGGCTGCTAATAAAGAGGACAGGCTCCGAAAAGCAATGGAA
GCTCAGGCTATTATCACTGAGGAATCAAAACAGTTTGCAGCTTGGAGGGA
TTCATTGGAGACTGTTCCCTACTAATTAGAAATTGAGAGCTTATGCTGAA
GAAATCAGGGTGGGCAAGTTAGAATAAATGCCCTATCAAAAATGGGTGAA
GGAATCCTCAAAAAAAACAAGGAGGGGCTGGCAATGACCTTACCCGTGGT
AATCAGGAATAACCTTCTTTCTGGGGCCCAATGGCACCCTTTGGAAATGG
GGGGGGAATGGAAGCAGGGATTCTAAAGAAAACCCTTGGAAAACTGGGCT
GGCTTAAAAAAAAAAGGGTTGGGCCTTGAAAAAAAAAAACATTTCTCTTT
TCCAAAGAAAAAGGGGTCGGGCGCAAAAAAAAAAAAAAAACCCCAAAAGG
GGGGACTTTTTTGAAAAACAAGGTTTTGTGCAAAGGGGGACCTTTCTTTT
TTCCCTTTCCCCCAAAATAGTAAAAAAAAAAAAAAAAAAAACCCCCTCCC
CCCCCCTTTGTTGTGGGGTGGT
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