EY735286

Overview
NameEY735286
Unique NameEY735286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_PSEPF (Glutamyl-tRNA reductase OS=Pseudomonas fluorescens (strain Pf0-1) GN=hemA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 4.028e-13
Identity = 48/155 (30.97%), Postives = 87/155 (56.13%), Query Frame = 1
Query:   22 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQF 486
            ++ L+IGAG+   LV +HL   G  ++VV NR+ ER + + E+     ++   LS++ +    +D+V +STAS+ P+  K  V+    ++         +DI+VPR++   V +++   +Y+VDDL EVVA N + R   A  A+ +++  +  F
Sbjct:  181 SQALLIGAGETITLVARHLHELGVKRIVVANRTLERASLLAEQFGAHAVL---LSDIPAELVRSDIVISSTASQLPILGKGAVESA--LKLRKHKPIFMVDIAVPRDIEPEVGELDDVYLYSVDDLHEVVAENLKSRQGAAQAAEEMVSVGADDF 330          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_HERAR (Glutamyl-tRNA reductase OS=Herminiimonas arsenicoxydans GN=hemA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 4.028e-13
Identity = 52/168 (30.95%), Postives = 80/168 (47.62%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +L IGAG+M +L   H  A+    + + NR+ ER   +    NG  I    L + L   A  D+V +STAS  P+        L  VE A+   R      +D++VPR++ + +  ++   +Y VDDL   V    E+R     +A+AII    + F  W D+   VP
Sbjct:  195 VLFIGAGEMIELCATHFAAQNPKSLTIANRTLERGETLAHRFNGRAIRLADLPDQL---ASYDIVISSTASSLPII------GLGMVERAIKARRHKPMFMVDLAVPRDIETEIGRLDDVFLYTVDDLGTFVQTGLENRQAAVTQAEAIIETRVQSFMHWIDARAVVP 353          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_CAMJR (Glutamyl-tRNA reductase OS=Campylobacter jejuni (strain RM1221) GN=hemA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 4.028e-13
Identity = 52/165 (31.52%), Postives = 87/165 (52.73%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            + +VIGAG+MG+LV KHL+A G  K++++NR  ++   +CE L GV   Y  L  +       +  F++T +   +     +++L          R F DI+VPR++   + + E   V+ VDDL+ VV  N   R ++A  A  II  E+ +F  + + L  +P
Sbjct:  181 KAVVIGAGEMGELVAKHLIAAG-AKVIILNRDLQKAKDLCERL-GVLSEYDSLENLKKYLNQYEFFFSATNAPNAIITNSLIEEL-------SYKRYFFDIAVPRDID--INENENISVFAVDDLEIVVQKNLALREQEARMAYGIIGRETSEFFRYLNDLALMP 334          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_XANOM (Glutamyl-tRNA reductase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=hemA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.261e-13
Identity = 46/146 (31.51%), Postives = 80/146 (54.79%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAII 465
            +L+IGAG+  +L  KHL      ++++ NR+      +  +  G  +   PL+++    A+ADVVF++TA+  PL  +  V+    + A      L  D++VPR++ + V ++  A +Y VDDL+  V  N+  R   A +A+AII
Sbjct:  177 VLLIGAGETIELAAKHLSESRVRRLLIANRTLAHAQTLASQHGGYAL---PLTDLERHLAEADVVFSATAAREPLVTRVQVEQA--LRARKRKPMLLFDLAVPRDIEASVDELSDAYLYTVDDLERAVEDNRRGRREAADQAEAII 317          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_STAES (Glutamyl-tRNA reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=hemA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.261e-13
Identity = 53/172 (30.81%), Postives = 87/172 (50.58%), Query Frame = 1
Query:    4 ESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +S HA    +VIGAG+MG+L + +L+  G + + +VNR+  +   + E+ N   + Y  LS + S     D+V +ST++E  +     V+ +   E       + IDI+VPR++   +  +     Y+VDDLK++V AN  +R   A      I EE      W + L  VP
Sbjct:  181 KSKHA----VVIGAGEMGELSLLNLLGSGISNVTIVNRTLSKAKILAEKHN---VSYDSLSALPSLLETTDIVISSTSAEDYIITNSMVKTIS--ETRKLDSLVLIDIAVPRDIEPGIDAITNIFNYDVDDLKDLVDANLRERQLAAETIAGQIPEEIDSHNEWVNMLGVVP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_STAEQ (Glutamyl-tRNA reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=hemA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.261e-13
Identity = 53/172 (30.81%), Postives = 87/172 (50.58%), Query Frame = 1
Query:    4 ESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +S HA    +VIGAG+MG+L + +L+  G + + +VNR+  +   + E+ N   + Y  LS + S     D+V +ST++E  +     V+ +   E       + IDI+VPR++   +  +     Y+VDDLK++V AN  +R   A      I EE      W + L  VP
Sbjct:  181 KSKHA----VVIGAGEMGELSLLNLLGSGISNVTIVNRTLSKAKILAEKHN---VSYDSLSALPSLLETTDIVISSTSAEDYIITNSMVKTIS--ETRKLDSLVLIDIAVPRDIEPGIDAITNIFNYDVDDLKDLVDANLRERQLAAETIAGQIPEEIDSHNEWVNMLGVVP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_RALEJ (Glutamyl-tRNA reductase OS=Ralstonia eutropha (strain JMP134) GN=hemA PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 5.261e-13
Identity = 58/183 (31.69%), Postives = 91/183 (49.73%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL--NGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIES 540
            S +T R+L IGAG+M +L   H  A+   ++VV NR+ ER   + E+L   G+      L E+     + D+V + TAS  P+        L  VE AV   +    + +D++VPR+V   VA ++   +Y VDDL  VV      R     +A+AII    + F  W ++   VP   E+++
Sbjct:  185 SVSTQRVLFIGAGEMIELCATHFAAQKPRQVVVANRTVERGEKLAEQLAEQGLTTQAIRLQELGERLHEFDIVVSCTASSLPII------GLGAVERAVKRRKHRPIMMVDLAVPRDVEPEVARLDDVFLYTVDDLGAVVREGNALRQAAVAQAEAIIESRVQNFMHWLETRSVVPVIRELQT 361          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_PSEF5 (Glutamyl-tRNA reductase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=hemA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.261e-13
Identity = 47/155 (30.32%), Postives = 84/155 (54.19%), Query Frame = 1
Query:   22 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQF 486
            ++ L+IGAG+   LV +HL   G  ++VV NR+ ER + + E+     ++   + + L     +D+V +STAS+ P+  K  V+    ++         +DI+VPR++   V +++   +Y VDDL EVVA N + R   A  A+ ++   ++ F
Sbjct:  181 SQALLIGAGETITLVARHLHDLGVKRIVVANRTLERASLLAEQFGAHAVLLSDIPQEL---VHSDIVISSTASQLPILGKGAVESA--LKLRKHKPIFMVDIAVPRDIEPEVGELDDVYLYTVDDLHEVVAENLKSRQGAAQAAEELVNIGAEDF 330          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_PELLD (Glutamyl-tRNA reductase OS=Pelodictyon luteolum (strain DSM 273) GN=hemA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.261e-13
Identity = 45/182 (24.73%), Postives = 93/182 (51.10%), Query Frame = 1
Query:    7 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL----FIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIES 540
            S+ +  ++L++GAG+ G+L  KH+ AK    +V+ NR++ +  A+ EEL    ++  P         + D++ T+ ++      KD++     +  A+   RL     +D+ +PRN    +  ++   + ++D LK ++  N E R  +  +  +II EE   F  W ++L+  P  ++++S
Sbjct:  178 SNLSMKKILLVGAGETGELAAKHMFAKNARNIVITNRTQSKAEALAEELGTNRVL--PFESYKEHLHEFDIIITAVST------KDYIITEADMHGAMQKRRLKPVIILDLGLPRNADPEIGKLQNMFLKDIDALKHIIDKNLERRSLELPKVHSIIDEELVAFGQWINTLKVRPTIVDLQS 351          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_METJA (Glutamyl-tRNA reductase OS=Methanocaldococcus jannaschii GN=hemA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.261e-13
Identity = 46/160 (28.75%), Postives = 84/160 (52.50%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSL 507
            +L+IGAG+M  LVIK L  K    ++V NR+ E+   + +EL G+ I +  L E L     AD+V ++T +  P+  K+ +++         G  + IDI+ PR+    + ++    ++ +DDL+ V   N + R  +  + + II EE ++   + D +
Sbjct:  161 VLLIGAGEMANLVIKALKEKNIKAIIVANRTYEKAEKLAKELGGMAIKFDKLEEALRY---ADIVISATGAPHPILNKERLKN--------AGKTIIIDIANPRDTTDDIRELPDIFLFTIDDLRLVAEENLKKRKEEIPKVEMIICEELERLKEFLDKM 309          
The following BLAST results are available for this feature:
BLAST of EY735286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
HEM1_PSEPF4.028e-1330.97Glutamyl-tRNA reductase OS=Pseudomonas fluorescens... [more]
HEM1_HERAR4.028e-1330.95Glutamyl-tRNA reductase OS=Herminiimonas arsenicox... [more]
HEM1_CAMJR4.028e-1331.52Glutamyl-tRNA reductase OS=Campylobacter jejuni (s... [more]
HEM1_XANOM5.261e-1331.51Glutamyl-tRNA reductase OS=Xanthomonas oryzae pv. ... [more]
HEM1_STAES5.261e-1330.81Glutamyl-tRNA reductase OS=Staphylococcus epidermi... [more]
HEM1_STAEQ5.261e-1330.81Glutamyl-tRNA reductase OS=Staphylococcus epidermi... [more]
HEM1_RALEJ5.261e-1331.69Glutamyl-tRNA reductase OS=Ralstonia eutropha (str... [more]
HEM1_PSEF55.261e-1330.32Glutamyl-tRNA reductase OS=Pseudomonas fluorescens... [more]
HEM1_PELLD5.261e-1324.73Glutamyl-tRNA reductase OS=Pelodictyon luteolum (s... [more]
HEM1_METJA5.261e-1328.75Glutamyl-tRNA reductase OS=Methanocaldococcus jann... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735286 ID=EY735286; Name=EY735286; organism=Citrus sinensis; type=EST; length=972bp
CCTGAATCTTCACATGCCACTGCCCGGATGTTGGTTATTGGAGCAGGCAA
GATGGGGAAGCTTGTGATAAAACACTTGGTAGCCAAAGGATGCACTAAGA
TGGTGGTTGTAAACAGGTCAGAAGAGAGAGTTGCAGCCATCTGCGAGGAG
CTCAACGGTGTTGAGATAATTTATAAACCTCTCTCAGAAATGTTGTCCTG
TGCTGCTGATGCAGATGTGGTCTTCACCAGCACAGCATCTGAAGCTCCAT
TATTCTTGAAGGATCATGTTCAGGACCTTCCTCCCGTTGAGGCTGCAGTT
GGGGGTTTGAGGCTCTTTATTGATATCTCCGTTCCTCGTAATGTGGGCTC
TTGTGTTGCAGATGTTGAAACTGCACGGGTTTACAATGTTGATGACCTTA
AGGAGGTAGTGGCTGCTAATAAAGAGGACAGGCTCCGAAAAGCAATGGAA
GCTCAGGCTATTATCACTGAGGAATCAAAACAGTTTGCAGCTTGGAGGGA
TTCATTGGAGACTGTTCCCTACTAATTAGAAATTGAGAGCTTATGCTGAA
GAAATCAGGGTGGGCAAGTTAGAATAAATGCCCTATCAAAAATGGGTGAA
GGAATCCTCAAAAAAAACAAGGAGGGGCTGGCAATGACCTTACCCGTGGT
AATCAGGAATAACCTTCTTTCTGGGGCCCAATGGCACCCTTTGGAAATGG
GGGGGGAATGGAAGCAGGGATTCTAAAGAAAACCCTTGGAAAACTGGGCT
GGCTTAAAAAAAAAAGGGTTGGGCCTTGAAAAAAAAAAACATTTCTCTTT
TCCAAAGAAAAAGGGGTCGGGCGCAAAAAAAAAAAAAAAACCCCAAAAGG
GGGGACTTTTTTGAAAAACAAGGTTTTGTGCAAAGGGGGACCTTTCTTTT
TTCCCTTTCCCCCAAAATAGTAAAAAAAAAAAAAAAAAAAACCCCCTCCC
CCCCCCTTTGTTGTGGGGTGGT
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