EY735286

Overview
NameEY735286
Unique NameEY735286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_CLONN (Glutamyl-tRNA reductase OS=Clostridium novyi (strain NT) GN=hemA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.261e-13
Identity = 47/161 (29.19%), Postives = 87/161 (54.04%), Query Frame = 1
Query:   34 VIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEII-YKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFI-DISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLE 510
            +IGAG MG+L +KHL+ +   ++ V NR+   V  + +E   +++I Y+   E+L    + D++ T+TA+   +  K+ +Q++           L+I D+++PR+V     D+E   +Y+VDD K +  +NK  R   ++ A+  I     +F  W  SL+
Sbjct:  184 IIGAGDMGRLALKHLINEELEEIFVANRTYNNVIDLLKEFPKIKLIDYEKKYEILD---NVDILITATAAPHLIIKKEQLQNIKQ--------ELYIMDLALPRDVEKSAGDIENIHLYDVDDFKNISDSNKIKREELSLIAKDSIDSYVNEFNQWMKSLK 333          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SALRD (Glutamyl-tRNA reductase OS=Salinibacter ruber (strain DSM 13855) GN=hemA PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 6.871e-13
Identity = 46/156 (29.49%), Postives = 78/156 (50.00%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            ++++GAGKMG+L ++ L  +    + VVNRS +R   +     G     +P ++     A AD+   +T +  P+    H   LP  + A     L +D+++PRNV   V +    R+Y++DDL+   A  +E R     EA++I  E  + F  W
Sbjct:  185 IVLVGAGKMGRLALEALADESLASLTVVNRSPDRAREVASPFGGDT---EPWADRHRAVATADLALVATGASDPVL---HAPALPAPDEAT----LVVDVAMPRNVDPAVDERPGYRLYDLDDLEAWTAEVRERRADAVPEAESICEELLEDFVTW 330          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM11_ACIBL (Glutamyl-tRNA reductase 1 OS=Acidobacteria bacterium (strain Ellin345) GN=hemA1 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.871e-13
Identity = 43/154 (27.92%), Postives = 88/154 (57.14%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL-FIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQF 486
            ++++GAGKM +   K+L+  G +++ V+NR+  +     E++ G+ +  +  +  L     AD++ +ST+    +  K    D   ++AA GG  +  +DI+VPR++   V +V    ++++DDL++V   N+ +R   A+ A+ I+ +E+K F
Sbjct:  186 VVLMGAGKMSESAAKYLMNHGASQICVINRTLHKAQEFSEKVGGIAVALEDRAPYLD---HADIIVSSTSCPHYVIEK---ADAERIQAARGGKPIVMVDIAVPRDIDPAVREVPGVHLFDMDDLEKVAKRNESERQVAAVAAEEILADEAKGF 333          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_XANOR (Glutamyl-tRNA reductase OS=Xanthomonas oryzae pv. oryzae GN=hemA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.973e-13
Identity = 46/146 (31.51%), Postives = 80/146 (54.79%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAII 465
            +L+IGAG+  +L  KHL      ++++ NR+      +  +  G  +   PL+++    A+ADVVF++TA+  PL  +  V+    + A      L  D++VPR++ + V ++  A +Y VDDL+  V  N+  R   A +A+AII
Sbjct:  177 VLLIGAGETIELAAKHLSEGRVRRLLIANRTLAHAQTLASQHGGYAL---PLTDLERHLAEADVVFSATAAREPLVTRVQVEQA--LRARKRKPMLLFDLAVPRDIEASVDELSDAYLYTVDDLERAVEDNRRGRREAADQAEAII 317          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_XANOP (Glutamyl-tRNA reductase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=hemA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.973e-13
Identity = 46/146 (31.51%), Postives = 80/146 (54.79%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAII 465
            +L+IGAG+  +L  KHL      ++++ NR+      +  +  G  +   PL+++    A+ADVVF++TA+  PL  +  V+    + A      L  D++VPR++ + V ++  A +Y VDDL+  V  N+  R   A +A+AII
Sbjct:  177 VLLIGAGETIELAAKHLSEGRVRRLLIANRTLAHAQTLASQHGGYAL---PLTDLERHLAEADVVFSATAAREPLVTRVQVEQA--LRARKRKPMLLFDLAVPRDIEASVDELSDAYLYTVDDLERAVEDNRRGRREAADQAEAII 317          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_RALME (Glutamyl-tRNA reductase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=hemA PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.973e-13
Identity = 58/183 (31.69%), Postives = 91/183 (49.73%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN--GVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIES 540
            S +T R+L IGAG+M +L   H  A+   ++VV NR+ ER   + E+L+  G+      L ++     + D+V + TAS  P+        L  VE AV   +    + +D++VPR+V   VA ++   +Y VDDL  VV      R     +A+AII      F  W ++   VP   E++S
Sbjct:  185 SVSTQRVLFIGAGEMIELCATHFAAQTPRQIVVANRTVERGEKLAEQLSEQGLTTQAIRLQDLGDRLHEFDIVVSCTASSLPII------GLGAVERAVKRRKHRPIMMVDLAVPRDVEPEVARLDDVFLYTVDDLGAVVREGNALRQAAVAQAEAIIDSRVLNFMHWLETRSVVPVIRELQS 361          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_PSEFS (Glutamyl-tRNA reductase OS=Pseudomonas fluorescens (strain SBW25) GN=hemA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.973e-13
Identity = 47/155 (30.32%), Postives = 87/155 (56.13%), Query Frame = 1
Query:   22 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQF 486
            ++ L+IGAG+   LV +HL   G  ++VV NR+ ER + + E+     ++   L+++ +    +D+V +STAS+ P+  K  V+    ++         +DI+VPR++   V +++   +Y+VDDL EVVA N + R   A  A+ +++  +  F
Sbjct:  181 SQALLIGAGETITLVARHLHDLGVKRIVVANRTLERASILAEQFGAHAVL---LADIPAELVRSDIVISSTASQLPILGKGAVESA--LKLRKHKPIFMVDIAVPRDIEPEVGELDDVYLYSVDDLHEVVAENLKSRQGAAQAAEEMVSAGADDF 330          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_METPP (Glutamyl-tRNA reductase OS=Methylibium petroleiphilum (strain PM1) GN=hemA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.973e-13
Identity = 54/169 (31.95%), Postives = 79/169 (46.75%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            R+L +GAG+M +L   H  A+   +M V NR+ ER   +        I    L + L    + D V + TAS  PL        L  VE A+   R      +D++VPR++   VA ++   +Y VDDL  +V +  E RL    +A+AII    + F  W     TVP
Sbjct:  188 RVLFVGAGEMIELAATHFSARAPARMAVANRTLERGERLASRFGAESIRLSDLPQRLH---EFDAVVSCTASSLPLI------GLGAVERALKVRRHRPIFMVDLAVPRDIEPEVARLDDVYLYTVDDLSAIVQSGGEKRLAAVAQAEAIIETGVQSFVHWLGQRGTVP 347          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_CAMJJ (Glutamyl-tRNA reductase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=hemA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.973e-13
Identity = 52/165 (31.52%), Postives = 86/165 (52.12%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            + +VIGAG+MG+L  KHL+A G  K++++NR  ++   +CE L GV   Y  L  +       +  F++T +   +     V++L          R F DI+VPR++   + + E   V+ VDDL+ VV  N   R ++A  A  II  E+ +F  + + L  +P
Sbjct:  181 KAVVIGAGEMGELAAKHLIAAG-AKVIILNRDLQKAKDLCERL-GVLSEYDSLENLKKYLNQYEFFFSATNAPNAIITNSLVEEL-------SYKRYFFDIAVPRDID--INENENISVFAVDDLEIVVQKNLALREQEARMAYGIIGRETSEFFRYLNDLALMP 334          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_AZOSB (Glutamyl-tRNA reductase OS=Azoarcus sp. (strain BH72) GN=hemA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.973e-13
Identity = 55/168 (32.74%), Postives = 81/168 (48.21%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +L IGAG+M +L   H    G   M V NR+E R  A+   L    +    +++ L      DVV + TAS  P+        L  VE AV   R    + +D++VPR+V   V  ++   +Y VDDL +VV A  E R +  +EA+ II +    F  W  + + VP
Sbjct:  181 VLFIGAGEMIELCAAHFAGAGPRSMTVANRTEARAEALAARLGAQTMRLDAIADALP---RFDVVVSCTASPLPIV------GLGMVERAVKVRRHRPIVMVDLAVPRDVEPEVGQLDDVFLYTVDDLAQVVDAGIESRQQAVVEAEGIIDQRVDGFLHWLHARDAVP 339          
The following BLAST results are available for this feature:
BLAST of EY735286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
HEM1_CLONN5.261e-1329.19Glutamyl-tRNA reductase OS=Clostridium novyi (stra... [more]
HEM1_SALRD6.871e-1329.49Glutamyl-tRNA reductase OS=Salinibacter ruber (str... [more]
HEM11_ACIBL6.871e-1327.92Glutamyl-tRNA reductase 1 OS=Acidobacteria bacteri... [more]
HEM1_XANOR8.973e-1331.51Glutamyl-tRNA reductase OS=Xanthomonas oryzae pv. ... [more]
HEM1_XANOP8.973e-1331.51Glutamyl-tRNA reductase OS=Xanthomonas oryzae pv. ... [more]
HEM1_RALME8.973e-1331.69Glutamyl-tRNA reductase OS=Ralstonia metallidurans... [more]
HEM1_PSEFS8.973e-1330.32Glutamyl-tRNA reductase OS=Pseudomonas fluorescens... [more]
HEM1_METPP8.973e-1331.95Glutamyl-tRNA reductase OS=Methylibium petroleiphi... [more]
HEM1_CAMJJ8.973e-1331.52Glutamyl-tRNA reductase OS=Campylobacter jejuni su... [more]
HEM1_AZOSB8.973e-1332.74Glutamyl-tRNA reductase OS=Azoarcus sp. (strain BH... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735286 ID=EY735286; Name=EY735286; organism=Citrus sinensis; type=EST; length=972bp
CCTGAATCTTCACATGCCACTGCCCGGATGTTGGTTATTGGAGCAGGCAA
GATGGGGAAGCTTGTGATAAAACACTTGGTAGCCAAAGGATGCACTAAGA
TGGTGGTTGTAAACAGGTCAGAAGAGAGAGTTGCAGCCATCTGCGAGGAG
CTCAACGGTGTTGAGATAATTTATAAACCTCTCTCAGAAATGTTGTCCTG
TGCTGCTGATGCAGATGTGGTCTTCACCAGCACAGCATCTGAAGCTCCAT
TATTCTTGAAGGATCATGTTCAGGACCTTCCTCCCGTTGAGGCTGCAGTT
GGGGGTTTGAGGCTCTTTATTGATATCTCCGTTCCTCGTAATGTGGGCTC
TTGTGTTGCAGATGTTGAAACTGCACGGGTTTACAATGTTGATGACCTTA
AGGAGGTAGTGGCTGCTAATAAAGAGGACAGGCTCCGAAAAGCAATGGAA
GCTCAGGCTATTATCACTGAGGAATCAAAACAGTTTGCAGCTTGGAGGGA
TTCATTGGAGACTGTTCCCTACTAATTAGAAATTGAGAGCTTATGCTGAA
GAAATCAGGGTGGGCAAGTTAGAATAAATGCCCTATCAAAAATGGGTGAA
GGAATCCTCAAAAAAAACAAGGAGGGGCTGGCAATGACCTTACCCGTGGT
AATCAGGAATAACCTTCTTTCTGGGGCCCAATGGCACCCTTTGGAAATGG
GGGGGGAATGGAAGCAGGGATTCTAAAGAAAACCCTTGGAAAACTGGGCT
GGCTTAAAAAAAAAAGGGTTGGGCCTTGAAAAAAAAAAACATTTCTCTTT
TCCAAAGAAAAAGGGGTCGGGCGCAAAAAAAAAAAAAAAACCCCAAAAGG
GGGGACTTTTTTGAAAAACAAGGTTTTGTGCAAAGGGGGACCTTTCTTTT
TTCCCTTTCCCCCAAAATAGTAAAAAAAAAAAAAAAAAAAACCCCCTCCC
CCCCCCTTTGTTGTGGGGTGGT
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