EY735286

Overview
NameEY735286
Unique NameEY735286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ACIBY (Glutamyl-tRNA reductase OS=Acinetobacter baumannii (strain AYE) GN=hemA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.973e-13
Identity = 49/157 (31.21%), Postives = 82/157 (52.23%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL-NGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQ 483
            ++V+ AG+M  LV KHL   G  KM++ NRS ER   + +E+ + VE+     S++      ADVV + T S         V     V+ A+   R    L +D++VPR++   V  ++   +Y VDDL+ V+  N   R + A+EA+ ++ + + Q
Sbjct:  181 VMVVAAGEMNSLVAKHLAEMGVAKMIICNRSRERADQLAQEIAHQVEVEIIDFSDLAENLYRADVVSSCTGS------LHQVIAYADVKTALKKRRYQQMLMVDLAVPRDIDPKVESLDGVYLYGVDDLQSVIDENLAQRRQAAVEAEVMVNQLATQ 331          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ACIBT (Glutamyl-tRNA reductase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=hemA PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.973e-13
Identity = 49/157 (31.21%), Postives = 82/157 (52.23%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL-NGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQ 483
            ++V+ AG+M  LV KHL   G  KM++ NRS ER   + +E+ + VE+     S++      ADVV + T S         V     V+ A+   R    L +D++VPR++   V  ++   +Y VDDL+ V+  N   R + A+EA+ ++ + + Q
Sbjct:  181 VMVVAAGEMNSLVAKHLAEMGVAKMIICNRSRERADQLAQEIAHQVEVEIIDFSDLAENLYRADVVSSCTGS------LHQVIAYADVKTALKKRRYQQMLMVDLAVPRDIDPKVESLDGVYLYGVDDLQSVIDENLAQRRQAAVEAEVMVNQLATQ 331          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ACIBS (Glutamyl-tRNA reductase OS=Acinetobacter baumannii (strain SDF) GN=hemA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.973e-13
Identity = 49/157 (31.21%), Postives = 82/157 (52.23%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL-NGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQ 483
            ++V+ AG+M  LV KHL   G  KM++ NRS ER   + +E+ + VE+     S++      ADVV + T S         V     V+ A+   R    L +D++VPR++   V  ++   +Y VDDL+ V+  N   R + A+EA+ ++ + + Q
Sbjct:  181 VMVVAAGEMNSLVAKHLAEMGVAKMIICNRSRERADQLAQEIAHQVEVEIIDFSDLAENLYRADVVSSCTGS------LHQVIAYADVKTALKKRRYQQMLMVDLAVPRDIDPKVESLDGVYLYGVDDLQSVIDENLAQRRQAAVEAEVMVNQLATQ 331          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ACIBC (Glutamyl-tRNA reductase OS=Acinetobacter baumannii (strain ACICU) GN=hemA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.973e-13
Identity = 49/157 (31.21%), Postives = 82/157 (52.23%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL-NGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQ 483
            ++V+ AG+M  LV KHL   G  KM++ NRS ER   + +E+ + VE+     S++      ADVV + T S         V     V+ A+   R    L +D++VPR++   V  ++   +Y VDDL+ V+  N   R + A+EA+ ++ + + Q
Sbjct:  181 VMVVAAGEMNSLVAKHLAEMGVAKMIICNRSRERADQLAQEIAHQVEVEIIDFSDLAENLYRADVVSSCTGS------LHQVIAYADVKTALKKRRYQQMLMVDLAVPRDIDPKVESLDGVYLYGVDDLQSVIDENLAQRRQAAVEAEVMVNQLATQ 331          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ACIB5 (Glutamyl-tRNA reductase OS=Acinetobacter baumannii (strain AB0057) GN=hemA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.973e-13
Identity = 49/157 (31.21%), Postives = 82/157 (52.23%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL-NGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQ 483
            ++V+ AG+M  LV KHL   G  KM++ NRS ER   + +E+ + VE+     S++      ADVV + T S         V     V+ A+   R    L +D++VPR++   V  ++   +Y VDDL+ V+  N   R + A+EA+ ++ + + Q
Sbjct:  181 VMVVAAGEMNSLVAKHLAEMGVAKMIICNRSRERADQLAQEIAHQVEVEIIDFSDLAENLYRADVVSSCTGS------LHQVIAYADVKTALKKRRYQQMLMVDLAVPRDIDPKVESLDGVYLYGVDDLQSVIDENLAQRRQAAVEAEVMVNQLATQ 331          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ACIB3 (Glutamyl-tRNA reductase OS=Acinetobacter baumannii (strain AB307-0294) GN=hemA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.973e-13
Identity = 49/157 (31.21%), Postives = 82/157 (52.23%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL-NGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQ 483
            ++V+ AG+M  LV KHL   G  KM++ NRS ER   + +E+ + VE+     S++      ADVV + T S         V     V+ A+   R    L +D++VPR++   V  ++   +Y VDDL+ V+  N   R + A+EA+ ++ + + Q
Sbjct:  181 VMVVAAGEMNSLVAKHLAEMGVAKMIICNRSRERADQLAQEIAHQVEVEIIDFSDLAENLYRADVVSSCTGS------LHQVIAYADVKTALKKRRYQQMLMVDLAVPRDIDPKVESLDGVYLYGVDDLQSVIDENLAQRRQAAVEAEVMVNQLATQ 331          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_PELPB (Glutamyl-tRNA reductase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=hemA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.172e-12
Identity = 47/184 (25.54%), Postives = 93/184 (50.54%), Query Frame = 1
Query:    7 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTA------SEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIES 540
            S+ +  ++L++GAG+ G+L  KH+  K    +V+ NR+  +   + EEL   +++  P         + D++ T+ +      +EA +      + L PV        + +D+ +PRNV   V+ ++   + ++D LK ++  N E R R+  +  AII EE   F  W ++L+  P  ++++S
Sbjct:  178 SNLSMKKVLLVGAGETGELAAKHMFQKNARNIVITNRTLSKAETLAEELGTNKVL--PFETFREHLHEFDIIITAISTKEYVLNEAEMHQSMIKRRLKPV--------IILDLGLPRNVDPDVSKLQNMFLKDIDALKHIIDKNLEKRSRELPKVNAIIEEELIAFGQWINTLKVRPTIVDLQS 351          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_MANSM (Glutamyl-tRNA reductase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=hemA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.172e-12
Identity = 47/157 (29.94%), Postives = 80/157 (50.96%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYK-PLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            +L++GAG+  +LV +HL+  G  K+++ NR+  R   + E+L   + I    L ++      AD+V +ST S   L   + V+     +       L +DI+VPR+V   V  ++    Y VDDL  ++  N  +R + + EA+ II  E+  F  W
Sbjct:  198 ILLVGAGETIELVARHLLRHGVKKLMISNRTLARAELLVEKLEHNKYIQVLSLQQLQDGLNQADIVISSTGSPIVLITAEMVKQAQ--QKRRNAPMLIVDIAVPRDVDERVEKLDGVYHYTVDDLHSIIQRNLSEREKASKEAETIIDAEASDFFEW 352          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_HAHCH (Glutamyl-tRNA reductase OS=Hahella chejuensis (strain KCTC 2396) GN=hemA PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.172e-12
Identity = 50/162 (30.86%), Postives = 83/162 (51.23%), Query Frame = 1
Query:   31 LVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETV 516
            L+IGAG+  +LV +HL   G   ++V NR+  R   +  E +G  I    + E L     AD+V  STAS  P+  K  V+    ++         +DI+VPR++   V+++    +Y VDDL++V+  N + R   A EA+ +I   +  F     +L++V
Sbjct:  185 LLIGAGETIELVARHLYRAGVRSLIVANRTLSRARDLAAEFHGSAIGLSDIPEYLH---RADIVIASTASPLPILGKGAVEKA--LKRRKHKPMFMVDIAVPRDIEEEVSELADVYLYTVDDLRQVIEDNMKSREGAAEEAERLIAAGAADFMYHLRALDSV 341          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_CAMJE (Glutamyl-tRNA reductase OS=Campylobacter jejuni GN=hemA PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.172e-12
Identity = 51/165 (30.91%), Postives = 86/165 (52.12%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            + +VIGAG+MG+L  KHL+A G  K++++NR  ++   +CE L GV   Y  L  +       +  F++T +   +     +++L          R F DI+VPR++   + + E   V+ VDDL+ VV  N   R ++A  A  II  E+ +F  + + L  +P
Sbjct:  181 KAVVIGAGEMGELAAKHLIAAG-AKVIILNRDLQKAKDLCERL-GVLSEYDSLENLKKYLNQYEFFFSATNAPNAIITNSLIEEL-------SYKRYFFDIAVPRDID--INENENISVFAVDDLEIVVQKNLALREQEARMAYGIIGRETSEFFRYLNDLALMP 334          
The following BLAST results are available for this feature:
BLAST of EY735286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
HEM1_ACIBY8.973e-1331.21Glutamyl-tRNA reductase OS=Acinetobacter baumannii... [more]
HEM1_ACIBT8.973e-1331.21Glutamyl-tRNA reductase OS=Acinetobacter baumannii... [more]
HEM1_ACIBS8.973e-1331.21Glutamyl-tRNA reductase OS=Acinetobacter baumannii... [more]
HEM1_ACIBC8.973e-1331.21Glutamyl-tRNA reductase OS=Acinetobacter baumannii... [more]
HEM1_ACIB58.973e-1331.21Glutamyl-tRNA reductase OS=Acinetobacter baumannii... [more]
HEM1_ACIB38.973e-1331.21Glutamyl-tRNA reductase OS=Acinetobacter baumannii... [more]
HEM1_PELPB1.172e-1225.54Glutamyl-tRNA reductase OS=Pelodictyon phaeoclathr... [more]
HEM1_MANSM1.172e-1229.94Glutamyl-tRNA reductase OS=Mannheimia succinicipro... [more]
HEM1_HAHCH1.172e-1230.86Glutamyl-tRNA reductase OS=Hahella chejuensis (str... [more]
HEM1_CAMJE1.172e-1230.91Glutamyl-tRNA reductase OS=Campylobacter jejuni GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735286 ID=EY735286; Name=EY735286; organism=Citrus sinensis; type=EST; length=972bp
CCTGAATCTTCACATGCCACTGCCCGGATGTTGGTTATTGGAGCAGGCAA
GATGGGGAAGCTTGTGATAAAACACTTGGTAGCCAAAGGATGCACTAAGA
TGGTGGTTGTAAACAGGTCAGAAGAGAGAGTTGCAGCCATCTGCGAGGAG
CTCAACGGTGTTGAGATAATTTATAAACCTCTCTCAGAAATGTTGTCCTG
TGCTGCTGATGCAGATGTGGTCTTCACCAGCACAGCATCTGAAGCTCCAT
TATTCTTGAAGGATCATGTTCAGGACCTTCCTCCCGTTGAGGCTGCAGTT
GGGGGTTTGAGGCTCTTTATTGATATCTCCGTTCCTCGTAATGTGGGCTC
TTGTGTTGCAGATGTTGAAACTGCACGGGTTTACAATGTTGATGACCTTA
AGGAGGTAGTGGCTGCTAATAAAGAGGACAGGCTCCGAAAAGCAATGGAA
GCTCAGGCTATTATCACTGAGGAATCAAAACAGTTTGCAGCTTGGAGGGA
TTCATTGGAGACTGTTCCCTACTAATTAGAAATTGAGAGCTTATGCTGAA
GAAATCAGGGTGGGCAAGTTAGAATAAATGCCCTATCAAAAATGGGTGAA
GGAATCCTCAAAAAAAACAAGGAGGGGCTGGCAATGACCTTACCCGTGGT
AATCAGGAATAACCTTCTTTCTGGGGCCCAATGGCACCCTTTGGAAATGG
GGGGGGAATGGAAGCAGGGATTCTAAAGAAAACCCTTGGAAAACTGGGCT
GGCTTAAAAAAAAAAGGGTTGGGCCTTGAAAAAAAAAAACATTTCTCTTT
TCCAAAGAAAAAGGGGTCGGGCGCAAAAAAAAAAAAAAAACCCCAAAAGG
GGGGACTTTTTTGAAAAACAAGGTTTTGTGCAAAGGGGGACCTTTCTTTT
TTCCCTTTCCCCCAAAATAGTAAAAAAAAAAAAAAAAAAAACCCCCTCCC
CCCCCCTTTGTTGTGGGGTGGT
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