EY735286

Overview
NameEY735286
Unique NameEY735286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_XYLFT (Glutamyl-tRNA reductase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=hemA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.531e-12
Identity = 42/153 (27.45%), Postives = 83/153 (54.25%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQF 486
            +L+IGAG+  +L  KHL      ++++ NR+  +   +  +  G  +   PL+E+    A+AD++F++TA+  P+  + +V+    +        L  D+++PR++ + V  +  A +Y +DDL+  V  N+  R   A  A+AII  + K++
Sbjct:  177 VLLIGAGETIQLAAKHLSEGRVQRLLIANRTHAKAQMLASQHGGYAL---PLTELNLHLAEADIIFSATAAPTPIVTQSNVESALHIRKRKP--ILLFDLAIPRDIETEVGTLTDAYLYTIDDLERAVEENRHSRREAAETAEAIIELQVKRY 324          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_XYLF2 (Glutamyl-tRNA reductase OS=Xylella fastidiosa (strain M23) GN=hemA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.531e-12
Identity = 42/153 (27.45%), Postives = 83/153 (54.25%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQF 486
            +L+IGAG+  +L  KHL      ++++ NR+  +   +  +  G  +   PL+E+    A+AD++F++TA+  P+  + +V+    +        L  D+++PR++ + V  +  A +Y +DDL+  V  N+  R   A  A+AII  + K++
Sbjct:  177 VLLIGAGETIQLAAKHLSEGRVQRLLIANRTHAKAQMLASQHGGYAL---PLTELNLHLAEADIIFSATAAPTPIVTQSNVESALHIRKRKP--ILLFDLAIPRDIETEVGTLTDAYLYTIDDLERAVEENRHSRREAAETAEAIIELQVKRY 324          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_HAES2 (Glutamyl-tRNA reductase OS=Haemophilus somnus (strain 2336) GN=hemA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.531e-12
Identity = 46/157 (29.30%), Postives = 79/157 (50.32%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEII-YKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            +L++GAG+  +LV +HL+  G   + + NR+  R   + E+L   + I    L  +      AD+V TST S   L  ++ ++    +        L +DI+VPR+V     ++E+   Y VDDL  ++  N   R + + +A+ II +ES  F  W
Sbjct:  197 ILLVGAGETIELVSRHLLRHGVNGLAIANRTLSRAEKLVEKLETTQKIDIFSLDRLSEGLKRADIVITSTGSPHVLISRNLIEQAQQMRHYKP--MLIVDIAVPRDVEESAGEIESVYHYTVDDLHNIIQHNINQREQASQQAEHIIQQESADFFEW 351          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_HAES1 (Glutamyl-tRNA reductase OS=Haemophilus somnus (strain 129Pt) GN=hemA PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.531e-12
Identity = 46/157 (29.30%), Postives = 79/157 (50.32%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEII-YKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            +L++GAG+  +LV +HL+  G   + + NR+  R   + E+L   + I    L  +      AD+V TST S   L  ++ ++    +        L +DI+VPR+V     ++E+   Y VDDL  ++  N   R + + +A+ II +ES  F  W
Sbjct:  197 ILLVGAGETIELVSRHLLRHGVNGLAIANRTLSRAEKLVEKLETTQKIDIFSLDRLSEGLKRADIVITSTGSPHVLISRNLIEQAQQMRHYKP--MLIVDIAVPRDVEESAGEIESVYHYTVDDLHNIIQYNINQREQASQQAEHIIQQESADFFEW 351          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_XANC5 (Glutamyl-tRNA reductase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=hemA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.999e-12
Identity = 45/146 (30.82%), Postives = 79/146 (54.11%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAII 465
            +L+IGAG+  +L  KHL      ++++ NR+      +  +  G  +   PL+++    A+ADVVF++TA+  PL  +  V+    +        L  D++VPR++ + V ++  A +Y VDDL+  V  N+  R   A +A+AII
Sbjct:  177 VLLIGAGETIELAAKHLSEGRVRRLLIANRTLAHAQTLASQHGGFAL---PLTDLERHLAEADVVFSATAAREPLVTRAQVEQA--LRTRKRKPMLLFDLAVPRDIEASVGELGDAYLYTVDDLERAVEDNRRGRREAADQAEAII 317          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_XYLFM (Glutamyl-tRNA reductase OS=Xylella fastidiosa (strain M12) GN=hemA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.611e-12
Identity = 41/153 (26.80%), Postives = 82/153 (53.59%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQF 486
            +L+IG G+  +L  KHL      ++++ NR+  +   +  +  G  +   PL+E+    A+AD++F++TA+  P+  + +V+    +        L  D+++PR++ + V  +  A +Y +DDL+  V  N+  R   A  A+AII  + K++
Sbjct:  177 VLLIGTGETIQLAAKHLSEGRVQRLLIANRTHAKAQMLASQHGGYAL---PLTELNLHLAEADIIFSATAAPTPIVTQSNVESALHIRKRKP--MLLFDLAIPRDIETEVGTLTDAYLYTIDDLERAVEENRRSRREAAETAEAIIELQVKRY 324          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_XYLFA (Glutamyl-tRNA reductase OS=Xylella fastidiosa GN=hemA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.611e-12
Identity = 41/153 (26.80%), Postives = 82/153 (53.59%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQF 486
            +L+IG G+  +L  KHL      ++++ NR+  +   +  +  G  +   PL+E+    A+AD++F++TA+  P+  + +V+    +        L  D+++PR++ + V  +  A +Y +DDL+  V  N+  R   A  A+AII  + K++
Sbjct:  177 VLLIGTGETIQLAAKHLSEGRVQRLLIANRTHAKAQMLASQHGGYAL---PLTELNLHLAEADIIFSATAAPTPIVTQSNVESALHIRKRKP--MLLFDLAIPRDIETEVGTLTDAYLYTIDDLERAVEENRRSRREAAETAEAIIELQVKRY 324          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_RALSO (Glutamyl-tRNA reductase OS=Ralstonia solanacearum GN=hemA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.611e-12
Identity = 56/176 (31.82%), Postives = 85/176 (48.30%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELN--GVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            S A  R+L IGAG+M +L   H  A+   + VV NR+ ER   + E L+  G+      L+E+ +   + D+V + TAS  P+        L  VE A+   R      +D++VPR++   VA +    +Y VDDL  +V      R     +A+AII    + F  W D+   VP
Sbjct:  186 SIAEQRVLFIGAGEMIELCATHFAAQKPRETVVANRTLERGEKLAEALSNQGLNARAVRLAELPARLGEFDIVVSCTASTLPII------GLGAVERAIKQRRHRPMFMVDLAVPRDIEPEVARLSDVFLYTVDDLGAIVREGNALRQAAVAQAEAIIETRVQNFMHWLDARSVVP 355          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_CYTH3 (Glutamyl-tRNA reductase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=hemA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.611e-12
Identity = 50/172 (29.07%), Postives = 86/172 (50.00%), Query Frame = 1
Query:    7 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVV-NRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            S+   A +L++G G++G  V ++  A    K + + NRS  +  A+  E  G+E +  P   +    A AD+V +S A E PLF K+ +Q L     ++   + FID+SVPR+V +   ++    VY++D ++       E+RL      + II +   +F  W   +E  P
Sbjct:  180 SATPNANILIVGLGEIGADVCRNFKANTSFKNITLTNRSPLKSEALAAEC-GIEHV--PFETLWEAVAKADLVISSVAKEEPLFTKEEIQKL-----SILSHKYFIDLSVPRSVDARAEELPGIIVYDIDHIQNRSNEALENRLNAIPHVRKIILDSIVEFNEWSKEMEVSP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_METS3 (Glutamyl-tRNA reductase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=hemA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.410e-12
Identity = 50/165 (30.30%), Postives = 89/165 (53.94%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR--LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETV 516
            +LVIGAGKMGKLV K L  K    + V NR+      +  +LNG  +++  L + +     AD++ ++T +   +  K+       +E   G  +  L IDI+ PR++   V ++   +++N+DDL+E+   N + R ++  EA+ II EE   F+  ++S + +
Sbjct:  169 VLVIGAGKMGKLVAKALAEKNLNAIFVANRTYYVAVELANDLNGHAVLFNELGKYVQ---TADLIISATGAPHYILNKER------LEKTDGDFKDLLMIDIANPRDICEDVCEL-GVKLFNIDDLREIADENTKLRKKEFAEAENIIDEE---FSLLKESFKLI 320          
The following BLAST results are available for this feature:
BLAST of EY735286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
HEM1_XYLFT1.531e-1227.45Glutamyl-tRNA reductase OS=Xylella fastidiosa (str... [more]
HEM1_XYLF21.531e-1227.45Glutamyl-tRNA reductase OS=Xylella fastidiosa (str... [more]
HEM1_HAES21.531e-1229.30Glutamyl-tRNA reductase OS=Haemophilus somnus (str... [more]
HEM1_HAES11.531e-1229.30Glutamyl-tRNA reductase OS=Haemophilus somnus (str... [more]
HEM1_XANC51.999e-1230.82Glutamyl-tRNA reductase OS=Xanthomonas campestris ... [more]
HEM1_XYLFM2.611e-1226.80Glutamyl-tRNA reductase OS=Xylella fastidiosa (str... [more]
HEM1_XYLFA2.611e-1226.80Glutamyl-tRNA reductase OS=Xylella fastidiosa GN=h... [more]
HEM1_RALSO2.611e-1231.82Glutamyl-tRNA reductase OS=Ralstonia solanacearum ... [more]
HEM1_CYTH32.611e-1229.07Glutamyl-tRNA reductase OS=Cytophaga hutchinsonii ... [more]
HEM1_METS33.410e-1230.30Glutamyl-tRNA reductase OS=Methanobrevibacter smit... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735286 ID=EY735286; Name=EY735286; organism=Citrus sinensis; type=EST; length=972bp
CCTGAATCTTCACATGCCACTGCCCGGATGTTGGTTATTGGAGCAGGCAA
GATGGGGAAGCTTGTGATAAAACACTTGGTAGCCAAAGGATGCACTAAGA
TGGTGGTTGTAAACAGGTCAGAAGAGAGAGTTGCAGCCATCTGCGAGGAG
CTCAACGGTGTTGAGATAATTTATAAACCTCTCTCAGAAATGTTGTCCTG
TGCTGCTGATGCAGATGTGGTCTTCACCAGCACAGCATCTGAAGCTCCAT
TATTCTTGAAGGATCATGTTCAGGACCTTCCTCCCGTTGAGGCTGCAGTT
GGGGGTTTGAGGCTCTTTATTGATATCTCCGTTCCTCGTAATGTGGGCTC
TTGTGTTGCAGATGTTGAAACTGCACGGGTTTACAATGTTGATGACCTTA
AGGAGGTAGTGGCTGCTAATAAAGAGGACAGGCTCCGAAAAGCAATGGAA
GCTCAGGCTATTATCACTGAGGAATCAAAACAGTTTGCAGCTTGGAGGGA
TTCATTGGAGACTGTTCCCTACTAATTAGAAATTGAGAGCTTATGCTGAA
GAAATCAGGGTGGGCAAGTTAGAATAAATGCCCTATCAAAAATGGGTGAA
GGAATCCTCAAAAAAAACAAGGAGGGGCTGGCAATGACCTTACCCGTGGT
AATCAGGAATAACCTTCTTTCTGGGGCCCAATGGCACCCTTTGGAAATGG
GGGGGGAATGGAAGCAGGGATTCTAAAGAAAACCCTTGGAAAACTGGGCT
GGCTTAAAAAAAAAAGGGTTGGGCCTTGAAAAAAAAAAACATTTCTCTTT
TCCAAAGAAAAAGGGGTCGGGCGCAAAAAAAAAAAAAAAACCCCAAAAGG
GGGGACTTTTTTGAAAAACAAGGTTTTGTGCAAAGGGGGACCTTTCTTTT
TTCCCTTTCCCCCAAAATAGTAAAAAAAAAAAAAAAAAAAACCCCCTCCC
CCCCCCTTTGTTGTGGGGTGGT
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