EY735286

Overview
NameEY735286
Unique NameEY735286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_LEGPL (Glutamyl-tRNA reductase OS=Legionella pneumophila (strain Lens) GN=hemA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.410e-12
Identity = 43/160 (26.88%), Postives = 80/160 (50.00%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSL 507
            + +IG+G+   LV K+L   G  + ++ +R+ E    + E  +G  +    + + L  A   DVV ++TA   P   K  V+    +E         +D++VPR++   V ++E   +YNVDDL+ ++    ++R   A++A+ +I  E   +  W  SL
Sbjct:  181 VFLIGSGETASLVAKYLHQHGVHRFLIASRTLENAQKLAETFDGKTLSIGDIPQYLPLA---DVVISATACPLPFINKSLVEHA--LEQRNHAPMFLLDLAVPRDIEGNVNELEQVHLYNVDDLQSMIEKGMDERRNAALQAEQLIESELDNYIRWHRSL 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_STRM5 (Glutamyl-tRNA reductase OS=Stenotrophomonas maltophilia (strain R551-3) GN=hemA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.453e-12
Identity = 46/153 (30.07%), Postives = 81/153 (52.94%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQF 486
            +L++GAG+  +L  +HL      ++++ NR+      +     GV +   PL+E+     +ADVVF++TA+  P+  ++ V     +        L  D++VPR++ + VA +  A +Y VDDL+  V  N+  R   A EA+AII  +  +F
Sbjct:  177 VLLVGAGETIELAARHLSEGKVRRLLIANRTLAHAQELASRHGGVAL---PLTELDRHLGEADVVFSATAAREPVIHREMVAKA--LRTRRHKPMLLFDLAVPRDIEADVATLNDAFLYTVDDLERAVEDNRRGRREAAAEAEAIIDLQVSRF 324          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_RUTMC (Glutamyl-tRNA reductase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=hemA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.453e-12
Identity = 48/160 (30.00%), Postives = 83/160 (51.88%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSL 507
            +L+IGAG+M +L   +L  KG  KM+V NR+ E    I        I  K  S   S    AD++ +STA+  P+  K  ++    ++         +DI++PR++   V  ++   +Y +DDL +VV  N  +R ++   AQ II ++++ F  W D++
Sbjct:  185 VLLIGAGEMIELCAHYLNQKGVNKMIVANRTIENAKKIAHLYQAQSIGLKQFS---SFVYKADIIISSTAASMPIIGKGLIESA--LKKRKHKPIFMLDIAIPRDIEPEVGQLDDVYLYTIDDLGQVVNDNIGNREKEKGLAQEIIVKQNQVFNKWLDTI 339          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_LEGPH (Glutamyl-tRNA reductase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=hemA PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 4.453e-12
Identity = 43/160 (26.88%), Postives = 79/160 (49.38%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSL 507
            + +IG+G+   LV K+L   G  + ++ +R+ E    + E   G  +    + + L  A   DVV ++TA   P   K  V+    +E         +D++VPR++   V ++E   +YNVDDL+ ++    ++R   A++A+ +I  E   +  W  SL
Sbjct:  181 VFLIGSGETASLVAKYLHQHGVHRFLIASRTLENAQKLAETFGGKTLSIGDIPQYLPLA---DVVISATACPLPFINKSLVEHA--LEQRNHAPMFLLDLAVPRDIEGNVNELEQVHLYNVDDLQSMIEKGMDERRNAALQAEQLIESELDNYIRWHRSL 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_LEGPA (Glutamyl-tRNA reductase OS=Legionella pneumophila (strain Paris) GN=hemA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.453e-12
Identity = 43/160 (26.88%), Postives = 79/160 (49.38%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSL 507
            + +IG+G+   LV K+L   G  + ++ +R+ E    + E   G  +    + + L  A   DVV ++TA   P   K  V+    +E         +D++VPR++   V ++E   +YNVDDL+ ++    ++R   A++A+ +I  E   +  W  SL
Sbjct:  181 VFLIGSGETASLVAKYLHQHGVHRFLIASRTLENAQKLAETFGGKTLSIGDIPQYLPLA---DVVISATACPLPFINKSLVEHA--LEQRNHAPMFLLDLAVPRDIEGNVNELEQVHLYNVDDLQSMIEKGMDERRNAALQAEQLIESELDNYIRWHRSL 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_UNCMA (Glutamyl-tRNA reductase OS=Uncultured methanogenic archaeon RC-I GN=hemA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.816e-12
Identity = 46/149 (30.87%), Postives = 76/149 (51.01%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEE 474
            +LV+GAG+MG LV   +  K    + V NR+ E+   +   L GV I  + L + +     ADVV  +T +   +  K  V+     +  +     FIDI+ PRN+   V +V    ++N+D L+++  A+   R  +A + +AII EE
Sbjct:  175 ILVVGAGEMGTLVANAMAEKSLRAIYVANRTFEQAEKLASSLQGVAIRLERLCDYMG---SADVVICATGAPHLIITKKMVEQCKGEKPLI-----FIDITNPRNIEETVGEVPGVTLHNIDSLRQINEASMRRRQGEARKVEAIIEEE 315          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_STRMK (Glutamyl-tRNA reductase OS=Stenotrophomonas maltophilia (strain K279a) GN=hemA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.816e-12
Identity = 46/153 (30.07%), Postives = 81/153 (52.94%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQF 486
            +L++GAG+  +L  +HL      ++++ NR+      +     GV +   PL+E+     +ADVVF++TA+  P+  ++ V     + A      L  D++VPR++ + V  +  A +Y VDDL+  V  N+  R   A EA+AII  +  +F
Sbjct:  177 VLLVGAGETIELAARHLSEGKVRRLLIANRTLAHAQELASRHGGVAL---PLTELDRHLGEADVVFSATAAREPVIHREMVAKA--LRARRHKPMLLFDLAVPRDIEAEVGTLNDAFLYTVDDLERAVEDNRRGRREAAAEAEAIIDLQVSRF 324          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_HALWD (Glutamyl-tRNA reductase OS=Haloquadratum walsbyi (strain DSM 16790) GN=hemA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.816e-12
Identity = 45/150 (30.00%), Postives = 72/150 (48.00%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEE 474
            + LVIGAG+MG LV + L +   +++V+ NR+ E   +I E +N        L  +     +A ++ T+T     L        + P +    G    ID++ PRNV    AD+E A V ++D L+ +    +  R   A E  A+I EE
Sbjct:  177 KALVIGAGEMGSLVAESLASTNISEVVIANRTIENAESIAETINSPAYAVS-LDSLTEVITEASIIMTATGYGKYL--------IEPTDIDGAGETFIIDLAQPRNVHPATADIENAIVQDIDALESITKETEASRQAAAREVDAMIDEE 317          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_AZOSE (Glutamyl-tRNA reductase OS=Azoarcus sp. (strain EbN1) GN=hemA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.816e-12
Identity = 50/169 (29.59%), Postives = 81/169 (47.93%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            R+L IGAG+M +L   +       ++ V NR+E R   +        +    + EML      DVV + TAS  P+        L  VE A+   R    + +D++VPR++ + V +++   +Y VDDL ++V A  E R +  +EA+ II      F  W  + + VP
Sbjct:  180 RVLFIGAGEMIELCAAYFAGACPKRIAVANRTEARAQLVAHRFGAEVMRLDVVGEMLP---HFDVVVSCTASPLPIV------GLGMVERAIKARRHRPIVMVDLAVPRDIEAEVGELDDVFLYTVDDLAQIVDAGLESRQQAVLEAEEIIDSRVNGFLHWMQARDAVP 339          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ARCB4 (Glutamyl-tRNA reductase OS=Arcobacter butzleri (strain RM4018) GN=hemA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.816e-12
Identity = 42/165 (25.45%), Postives = 85/165 (51.52%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            + LV+GAG+M +L +KHL+A G   + +++R  ++   +      V +  +P  ++        ++ T+T++  P+  K++         +    R + DI+VPR++   ++ +    +++VDDL+++V  N   R  +A  A  I++  S +F  W  SLE  P
Sbjct:  185 KALVVGAGEMSELTVKHLIASGFD-VTIISRDTKKAQNLASTFE-VHVNVEPYDKLTQLLITTPIMITATSAPYPIITKENAP-------SSNINRYWFDIAVPRDIDENIS-MSNLEIFSVDDLQDIVNENMSLRAEQAKTAYGIVSRMSLEFFEWLKSLEIEP 339          
The following BLAST results are available for this feature:
BLAST of EY735286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
HEM1_LEGPL3.410e-1226.88Glutamyl-tRNA reductase OS=Legionella pneumophila ... [more]
HEM1_STRM54.453e-1230.07Glutamyl-tRNA reductase OS=Stenotrophomonas maltop... [more]
HEM1_RUTMC4.453e-1230.00Glutamyl-tRNA reductase OS=Ruthia magnifica subsp.... [more]
HEM1_LEGPH4.453e-1226.88Glutamyl-tRNA reductase OS=Legionella pneumophila ... [more]
HEM1_LEGPA4.453e-1226.88Glutamyl-tRNA reductase OS=Legionella pneumophila ... [more]
HEM1_UNCMA5.816e-1230.87Glutamyl-tRNA reductase OS=Uncultured methanogenic... [more]
HEM1_STRMK5.816e-1230.07Glutamyl-tRNA reductase OS=Stenotrophomonas maltop... [more]
HEM1_HALWD5.816e-1230.00Glutamyl-tRNA reductase OS=Haloquadratum walsbyi (... [more]
HEM1_AZOSE5.816e-1229.59Glutamyl-tRNA reductase OS=Azoarcus sp. (strain Eb... [more]
HEM1_ARCB45.816e-1225.45Glutamyl-tRNA reductase OS=Arcobacter butzleri (st... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735286 ID=EY735286; Name=EY735286; organism=Citrus sinensis; type=EST; length=972bp
CCTGAATCTTCACATGCCACTGCCCGGATGTTGGTTATTGGAGCAGGCAA
GATGGGGAAGCTTGTGATAAAACACTTGGTAGCCAAAGGATGCACTAAGA
TGGTGGTTGTAAACAGGTCAGAAGAGAGAGTTGCAGCCATCTGCGAGGAG
CTCAACGGTGTTGAGATAATTTATAAACCTCTCTCAGAAATGTTGTCCTG
TGCTGCTGATGCAGATGTGGTCTTCACCAGCACAGCATCTGAAGCTCCAT
TATTCTTGAAGGATCATGTTCAGGACCTTCCTCCCGTTGAGGCTGCAGTT
GGGGGTTTGAGGCTCTTTATTGATATCTCCGTTCCTCGTAATGTGGGCTC
TTGTGTTGCAGATGTTGAAACTGCACGGGTTTACAATGTTGATGACCTTA
AGGAGGTAGTGGCTGCTAATAAAGAGGACAGGCTCCGAAAAGCAATGGAA
GCTCAGGCTATTATCACTGAGGAATCAAAACAGTTTGCAGCTTGGAGGGA
TTCATTGGAGACTGTTCCCTACTAATTAGAAATTGAGAGCTTATGCTGAA
GAAATCAGGGTGGGCAAGTTAGAATAAATGCCCTATCAAAAATGGGTGAA
GGAATCCTCAAAAAAAACAAGGAGGGGCTGGCAATGACCTTACCCGTGGT
AATCAGGAATAACCTTCTTTCTGGGGCCCAATGGCACCCTTTGGAAATGG
GGGGGGAATGGAAGCAGGGATTCTAAAGAAAACCCTTGGAAAACTGGGCT
GGCTTAAAAAAAAAAGGGTTGGGCCTTGAAAAAAAAAAACATTTCTCTTT
TCCAAAGAAAAAGGGGTCGGGCGCAAAAAAAAAAAAAAAACCCCAAAAGG
GGGGACTTTTTTGAAAAACAAGGTTTTGTGCAAAGGGGGACCTTTCTTTT
TTCCCTTTCCCCCAAAATAGTAAAAAAAAAAAAAAAAAAAACCCCCTCCC
CCCCCCTTTGTTGTGGGGTGGT
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