EY735286

Overview
NameEY735286
Unique NameEY735286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_AKKM8 (Glutamyl-tRNA reductase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=hemA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.816e-12
Identity = 48/155 (30.97%), Postives = 81/155 (52.26%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQF 486
            R+L++GAG+M ++  + L A+G   + V NRS +R   +   + G  I Y      L    D DVV  +TA+   +  ++    L P+ A+     LF IDISVPRN+   VAD++   +Y++D L ++    K  R ++    +AII +   ++
Sbjct:  183 RVLILGAGEMSRVTGRALHARGAEGIYVANRSFDRAVELAGMIGGQAIRYDVWGNYLR---DIDVVVAATAAPHCIITRE---TLLPLRASRKYRSLFLIDISVPRNISPDVADIDEVYLYDIDTLTQLADEAKRSRKQEVSRCEAIIRDSISRY 331          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_POLSJ (Glutamyl-tRNA reductase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=hemA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.596e-12
Identity = 53/169 (31.36%), Postives = 80/169 (47.34%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            R+L +GAG+M  L   H  AK    M + NR+ ER   +     G E++   L+++ S   + D V + TAS  P+        L  VE AV   +      +D++VPR++   V D+    +Y VDDL  VV   K++R     +A+ II    + F  W     TVP
Sbjct:  183 RVLFVGAGEMIDLAATHFAAKTPKSMAIANRTLERGEKLASRF-GAEVMR--LADLPSRLHEFDAVISCTASTLPII------GLGAVERAVKLRKHRPMFMVDLAVPRDIEPEVKDLPDIYLYTVDDLAHVVQTGKDNRQAAVAQAEVIIDAGVQNFMHWLGQRRTVP 342          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_LEGPC (Glutamyl-tRNA reductase OS=Legionella pneumophila (strain Corby) GN=hemA PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 7.596e-12
Identity = 43/160 (26.88%), Postives = 78/160 (48.75%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSL 507
            + +IG+G+   LV K+L   G  + ++ +R+ E    + E   G  +    + + L  A   DVV ++TA   P   K  V+    +E         +D++VPR++   V ++E   +YNVDDL+ ++     +R   A++A+ +I  E   +  W  SL
Sbjct:  181 VFLIGSGETASLVAKYLHQHGVHRFLIASRTLENAQKLAETFGGKTLSIGDIPQYLPLA---DVVISATACPLPFINKSLVEHA--LEQRNHAPMFLLDLAVPRDIEGNVNELEQVHLYNVDDLQSMIEKGMNERRNAALQAEQLIESELDNYIRWHRSL 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_METAC (Glutamyl-tRNA reductase OS=Methanosarcina acetivorans GN=hemA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.921e-12
Identity = 49/151 (32.45%), Postives = 81/151 (53.64%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR--LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEE 474
            +LVIGAG++G LV K L  K    + + NR+ ++   I  EL G  +    L ++     DADVV + T +   +  ++ ++     EA  G  R  L IDI+ PR++   VA++E   + N+D+L+ +     + R  +A +A+AII EE
Sbjct:  176 VLVIGAGEIGVLVAKALAEKDIEAIYIANRTFKKAEEIAYELGGYAV---RLDDIRGHLPDADVVISGTGAPHYILTREMIE-----EALDGRERKLLLIDIANPRDIEESVAELENVELCNIDNLRVISERTLKMRKEEAKKAEAIIQEE 318          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_HERA2 (Glutamyl-tRNA reductase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=hemA PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.586e-11
Identity = 41/156 (26.28%), Postives = 85/156 (54.49%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            +++IGAG+ G+L +KH + +  + + V++R+ ER A + E     ++  KP+SE+ +    +DVV + T+S   +   +  Q L   +A      + +D++VPR++   V  +    +Y+VDD++ +   N+  +  +   A+AI+  E  ++  W
Sbjct:  181 VVIIGAGRTGELALKHYL-EYTSNITVLSRTFERAARLAEHH---KVAAKPISELAAVLQASDVVISCTSSPELMLDFEQAQLL---QAQRQRQWVLLDLAVPRDIDRHVGALPEVWLYDVDDMQAICERNRASKAAEVAGAEAIVERELIKWQEW 329          

HSP 2 Score: 23.0978 bits (48), Expect = 1.586e-11
Identity = 11/21 (52.38%), Postives = 15/21 (71.43%), Query Frame = 2
Query:  512 LFPTN*KLRAYAEEIRVGKLE 574
            + PT   LRA+AE IR+ +LE
Sbjct:  335 VLPTIRALRAHAEAIRLAELE 355          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_METCA (Glutamyl-tRNA reductase OS=Methylococcus capsulatus GN=hemA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.692e-11
Identity = 44/159 (27.67%), Postives = 79/159 (49.69%), Query Frame = 1
Query:   31 LVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            +++GAG+  +L  +HL       +++ NR+ +R   +  +  G  I  + L + L   A AD++  ST S  P+  K         E+A+   R      +D++VPR++   V  ++   +Y VDDL+  V  N + R   A++A+ II  E + F +W
Sbjct:  184 ILVGAGETIELTARHLTENRIGHLIIANRTFDRAHTLANQFGGFAISLEELPKHL---AKADIIVASTGSPLPILGKGSF------ESALRSRRHKPMFIVDLAVPRDIEPEVEQLQDVYLYTVDDLQHTVEENLKTRQEAALQAEEIIDLEVEHFLSW 333          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_METBF (Glutamyl-tRNA reductase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=hemA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.692e-11
Identity = 46/151 (30.46%), Postives = 83/151 (54.97%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESK 480
            +LVIGAG++G LV K L AK    + + NR+ ++   +  EL G  +    L+++ +   +ADVV + T +   +  ++ V+           L L IDI+ PR++   VA+++  ++ N+D+L+ +     + R  +A +A+AII EE K
Sbjct:  175 VLVIGAGEIGVLVAKALAAKDIEAIYIANRTFKKAEELAYELGGYAV---KLNDVQTQLKNADVVISGTGAPHYILTREIVEKAIEERDKTRKL-LLIDIANPRDIEESVAELDNVKLCNIDNLRVISEKTLKMRKEEAKKAEAIIQEEIK 321          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_DICNV (Glutamyl-tRNA reductase OS=Dichelobacter nodosus (strain VCS1703A) GN=hemA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.692e-11
Identity = 39/155 (25.16%), Postives = 81/155 (52.26%), Query Frame = 1
Query:   31 LVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            +++GAG+  +LV ++L      ++++ NR+  R   + E + G  +    L++ L    +AD++F    + A +FL      +  ++     L+++ID+ +P N    + + E A +Y++D+L +++  N+E R + A EA+  I   S  F  W
Sbjct:  184 IIVGAGETAQLVARYLHDLKIKRLIIANRTLNRAQQLAESVGGYALSLPQLADHLH---EADMIFG--CARADVFLVTQNMAITALQRRQNTLQVYIDLGIPHNFDRNIDNKENAFLYDMDNLAQLIDKNRETRQKAAAEAETFIRLYSNDFLNW 333          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ALKMQ (Glutamyl-tRNA reductase OS=Alkaliphilus metalliredigens (strain QYMF) GN=hemA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.692e-11
Identity = 43/165 (26.06%), Postives = 85/165 (51.52%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEII-YKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +LV+G GKM ++ I++L+ KG  ++ + NR++E V  + E+   +  + Y    EML+     D V ++T +   +F K+ ++ +      +      IDI++PR++   V ++E   ++++DDLKE+   N   R+      +  I E  +++  W   L   P
Sbjct:  185 VLVVGFGKMSRIAIENLLCKGIKRLYICNRTKESVQELIEKHPQIHYLSYDQKYEMLN---GVDAVISATGAPHFIFYKEDMEKIYQKHRPM----CMIDIALPRDIDPAVKEIEGIELFHIDDLKEIANENLAYRMDCIEIIKQSINEAIEKYEGWYQCLPIYP 342          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_STAS1 (Glutamyl-tRNA reductase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=hemA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.210e-11
Identity = 47/163 (28.83%), Postives = 83/163 (50.92%), Query Frame = 1
Query:   31 LVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            L+IGAG M +L + +L+  G T + +VNR+  +   +  + +   + ++P+  +     D D+V +ST+SE  +   + +Q +   E     L + IDI+VPR++   +  +     Y+VDDLK +V AN  +R   A +    I  E +    W + L  VP
Sbjct:  186 LIIGAGDMSELSLLNLIGSGVTDITIVNRTLSKAQDLAMKHH---VKFEPMESLPRLLVDVDIVISSTSSENYIVTNEMLQSIS-TERKHDSL-VMIDIAVPRDIEPNIDTIHDMFSYDVDDLKGLVDANLRERQLAAEQIIQNIPNEIEAHNEWVNMLGVVP 343          
The following BLAST results are available for this feature:
BLAST of EY735286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
HEM1_AKKM85.816e-1230.97Glutamyl-tRNA reductase OS=Akkermansia muciniphila... [more]
HEM1_POLSJ7.596e-1231.36Glutamyl-tRNA reductase OS=Polaromonas sp. (strain... [more]
HEM1_LEGPC7.596e-1226.88Glutamyl-tRNA reductase OS=Legionella pneumophila ... [more]
HEM1_METAC9.921e-1232.45Glutamyl-tRNA reductase OS=Methanosarcina acetivor... [more]
HEM1_HERA21.586e-1126.28Glutamyl-tRNA reductase OS=Herpetosiphon aurantiac... [more]
HEM1_METCA1.692e-1127.67Glutamyl-tRNA reductase OS=Methylococcus capsulatu... [more]
HEM1_METBF1.692e-1130.46Glutamyl-tRNA reductase OS=Methanosarcina barkeri ... [more]
HEM1_DICNV1.692e-1125.16Glutamyl-tRNA reductase OS=Dichelobacter nodosus (... [more]
HEM1_ALKMQ1.692e-1126.06Glutamyl-tRNA reductase OS=Alkaliphilus metallired... [more]
HEM1_STAS12.210e-1128.83Glutamyl-tRNA reductase OS=Staphylococcus saprophy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735286 ID=EY735286; Name=EY735286; organism=Citrus sinensis; type=EST; length=972bp
CCTGAATCTTCACATGCCACTGCCCGGATGTTGGTTATTGGAGCAGGCAA
GATGGGGAAGCTTGTGATAAAACACTTGGTAGCCAAAGGATGCACTAAGA
TGGTGGTTGTAAACAGGTCAGAAGAGAGAGTTGCAGCCATCTGCGAGGAG
CTCAACGGTGTTGAGATAATTTATAAACCTCTCTCAGAAATGTTGTCCTG
TGCTGCTGATGCAGATGTGGTCTTCACCAGCACAGCATCTGAAGCTCCAT
TATTCTTGAAGGATCATGTTCAGGACCTTCCTCCCGTTGAGGCTGCAGTT
GGGGGTTTGAGGCTCTTTATTGATATCTCCGTTCCTCGTAATGTGGGCTC
TTGTGTTGCAGATGTTGAAACTGCACGGGTTTACAATGTTGATGACCTTA
AGGAGGTAGTGGCTGCTAATAAAGAGGACAGGCTCCGAAAAGCAATGGAA
GCTCAGGCTATTATCACTGAGGAATCAAAACAGTTTGCAGCTTGGAGGGA
TTCATTGGAGACTGTTCCCTACTAATTAGAAATTGAGAGCTTATGCTGAA
GAAATCAGGGTGGGCAAGTTAGAATAAATGCCCTATCAAAAATGGGTGAA
GGAATCCTCAAAAAAAACAAGGAGGGGCTGGCAATGACCTTACCCGTGGT
AATCAGGAATAACCTTCTTTCTGGGGCCCAATGGCACCCTTTGGAAATGG
GGGGGGAATGGAAGCAGGGATTCTAAAGAAAACCCTTGGAAAACTGGGCT
GGCTTAAAAAAAAAAGGGTTGGGCCTTGAAAAAAAAAAACATTTCTCTTT
TCCAAAGAAAAAGGGGTCGGGCGCAAAAAAAAAAAAAAAACCCCAAAAGG
GGGGACTTTTTTGAAAAACAAGGTTTTGTGCAAAGGGGGACCTTTCTTTT
TTCCCTTTCCCCCAAAATAGTAAAAAAAAAAAAAAAAAAAACCCCCTCCC
CCCCCCTTTGTTGTGGGGTGGT
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