EY735286

Overview
NameEY735286
Unique NameEY735286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_CAMC5 (Glutamyl-tRNA reductase OS=Campylobacter curvus (strain 525.92) GN=hemA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.210e-11
Identity = 46/163 (28.22%), Postives = 88/163 (53.99%), Query Frame = 1 
Query:   31 LVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +VIGAG+MG+L  KHL+  G   ++++NRS + V  + E L G +  +  + ++       D++F+ST++   +   + ++   P E      R F DI+VPR++   + + +   VY+VD L+E+V  N   R  +A  A +I+ + + +F  +     ++P
Sbjct:  187 VVIGAGEMGELAAKHLITSG-ANVIIINRSSDHVEELVENL-GDKASWDSILKLKEYINKYDLIFSSTSAPHAIITGELIE---PQEFR----RYFFDIAVPRDID--LVNTDKISVYSVDSLEEMVRRNLALREEQAQTAYSIVGQSTNEFLKFLKDNISIP 338
[Close]
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_STAAW (Glutamyl-tRNA reductase OS=Staphylococcus aureus (strain MW2) GN=hemA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.887e-11
Identity = 46/163 (28.22%), Postives = 82/163 (50.31%), Query Frame = 1 
Query:   31 LVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            ++IGAG+M +L + +L+  G T + VVNR+ E    +  +    ++ Y  LS + +    AD+V +ST++++ +   + ++ +   E       + IDI+VPR++   ++ +     Y+VDDLK +V AN  +R   A      I  E      W   L  VP
Sbjct:  186 IIIGAGEMSELSLLNLLGSGITDITVVNRTIENAMKLAAKH---QVKYDELSSLPNLLESADIVISSTSAQSYIITNEMIERI--AENRKQDSLVLIDIAVPRDIEPGISAITNIFNYDVDDLKGLVDANLRERQLAAATISEQIPAEIHAHNEWISMLGVVP 343
[Close]
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_STAAT (Glutamyl-tRNA reductase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=hemA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.887e-11
Identity = 46/163 (28.22%), Postives = 82/163 (50.31%), Query Frame = 1 
Query:   31 LVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            ++IGAG+M +L + +L+  G T + VVNR+ E    +  +    ++ Y  LS + +    AD+V +ST++++ +   + ++ +   E       + IDI+VPR++   ++ +     Y+VDDLK +V AN  +R   A      I  E      W   L  VP
Sbjct:  186 IIIGAGEMSELSLLNLLGSGITDITVVNRTIENAMKLAAKH---QVKYDELSSLPNLLESADIVISSTSAQSYIITNEMIERI--AENRKQDSLVLIDIAVPRDIEPGISAITNIFNYDVDDLKGLVDANLRERQLAAATISEQIPAEIHAHNEWISMLGVVP 343
[Close]
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_STAAS (Glutamyl-tRNA reductase OS=Staphylococcus aureus (strain MSSA476) GN=hemA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.887e-11
Identity = 46/163 (28.22%), Postives = 82/163 (50.31%), Query Frame = 1 
Query:   31 LVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            ++IGAG+M +L + +L+  G T + VVNR+ E    +  +    ++ Y  LS + +    AD+V +ST++++ +   + ++ +   E       + IDI+VPR++   ++ +     Y+VDDLK +V AN  +R   A      I  E      W   L  VP
Sbjct:  186 IIIGAGEMSELSLLNLLGSGITDITVVNRTIENAMKLAAKH---QVKYDELSSLPNLLESADIVISSTSAQSYIITNEMIERI--AENRKQDSLVLIDIAVPRDIEPGISAITNIFNYDVDDLKGLVDANLRERQLAAATISEQIPAEIHAHNEWISMLGVVP 343
[Close]
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_STAAR (Glutamyl-tRNA reductase OS=Staphylococcus aureus (strain MRSA252) GN=hemA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.887e-11
Identity = 46/163 (28.22%), Postives = 82/163 (50.31%), Query Frame = 1 
Query:   31 LVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            ++IGAG+M +L + +L+  G T + VVNR+ E    +  +    ++ Y  LS + +    AD+V +ST++++ +   + ++ +   E       + IDI+VPR++   ++ +     Y+VDDLK +V AN  +R   A      I  E      W   L  VP
Sbjct:  186 IIIGAGEMSELSLLNLLGSGITDITVVNRTIENAMKLAAKH---QVKYDELSSLPNLLESADIVISSTSAQSYIITNEMIERI--AENRKQDSLVLIDIAVPRDIEPGISAITNIFNYDVDDLKGLVDANLRERQLAAATISEQIPAEIHAHNEWVSMLGVVP 343
[Close]
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_STAAN (Glutamyl-tRNA reductase OS=Staphylococcus aureus (strain N315) GN=hemA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.887e-11
Identity = 46/163 (28.22%), Postives = 82/163 (50.31%), Query Frame = 1 
Query:   31 LVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            ++IGAG+M +L + +L+  G T + VVNR+ E    +  +    ++ Y  LS + +    AD+V +ST++++ +   + ++ +   E       + IDI+VPR++   ++ +     Y+VDDLK +V AN  +R   A      I  E      W   L  VP
Sbjct:  186 IIIGAGEMSELSLLNLLGSGITDITVVNRTIENAMKLAAKH---QVKYDELSSLPNLLESADIVISSTSAQSYIITNEMIERI--AENRKQDSLVLIDIAVPRDIEPGISAITNIFNYDVDDLKGLVDANLRERQLAAATISEQIPAEIHAHNEWISMLGVVP 343
[Close]
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_STAAM (Glutamyl-tRNA reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=hemA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.887e-11
Identity = 46/163 (28.22%), Postives = 82/163 (50.31%), Query Frame = 1 
Query:   31 LVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            ++IGAG+M +L + +L+  G T + VVNR+ E    +  +    ++ Y  LS + +    AD+V +ST++++ +   + ++ +   E       + IDI+VPR++   ++ +     Y+VDDLK +V AN  +R   A      I  E      W   L  VP
Sbjct:  186 IIIGAGEMSELSLLNLLGSGITDITVVNRTIENAMKLAAKH---QVKYDELSSLPNLLESADIVISSTSAQSYIITNEMIERI--AENRKQDSLVLIDIAVPRDIEPGISAITNIFNYDVDDLKGLVDANLRERQLAAATISEQIPAEIHAHNEWISMLGVVP 343
[Close]
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_STAAE (Glutamyl-tRNA reductase OS=Staphylococcus aureus (strain Newman) GN=hemA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.887e-11
Identity = 46/163 (28.22%), Postives = 82/163 (50.31%), Query Frame = 1 
Query:   31 LVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            ++IGAG+M +L + +L+  G T + VVNR+ E    +  +    ++ Y  LS + +    AD+V +ST++++ +   + ++ +   E       + IDI+VPR++   ++ +     Y+VDDLK +V AN  +R   A      I  E      W   L  VP
Sbjct:  186 IIIGAGEMSELSLLNLLGSGITDITVVNRTIENAMKLAAKH---QVKYDELSSLPNLLESADIVISSTSAQSYIITNEMIERI--AENRKQDSLVLIDIAVPRDIEPGISAITNIFNYDVDDLKGLVDANLRERQLAAATISEQIPAEIHAHNEWISMLGVVP 343
[Close]
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_STAAC (Glutamyl-tRNA reductase OS=Staphylococcus aureus (strain COL) GN=hemA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.887e-11
Identity = 46/163 (28.22%), Postives = 82/163 (50.31%), Query Frame = 1 
Query:   31 LVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            ++IGAG+M +L + +L+  G T + VVNR+ E    +  +    ++ Y  LS + +    AD+V +ST++++ +   + ++ +   E       + IDI+VPR++   ++ +     Y+VDDLK +V AN  +R   A      I  E      W   L  VP
Sbjct:  186 IIIGAGEMSELSLLNLLGSGITDITVVNRTIENAMKLAAKH---QVKYDELSSLPNLLESADIVISSTSAQSYIITNEMIERI--AENRKQDSLVLIDIAVPRDIEPGISAITNIFNYDVDDLKGLVDANLRERQLAAATISEQIPAEIHAHNEWISMLGVVP 343
[Close]
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_STAA9 (Glutamyl-tRNA reductase OS=Staphylococcus aureus (strain JH9) GN=hemA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.887e-11
Identity = 46/163 (28.22%), Postives = 82/163 (50.31%), Query Frame = 1 
Query:   31 LVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            ++IGAG+M +L + +L+  G T + VVNR+ E    +  +    ++ Y  LS + +    AD+V +ST++++ +   + ++ +   E       + IDI+VPR++   ++ +     Y+VDDLK +V AN  +R   A      I  E      W   L  VP
Sbjct:  186 IIIGAGEMSELSLLNLLGSGITDITVVNRTIENAMKLAAKH---QVKYDELSSLPNLLESADIVISSTSAQSYIITNEMIERI--AENRKQDSLVLIDIAVPRDIEPGISAITNIFNYDVDDLKGLVDANLRERQLAAATISEQIPAEIHAHNEWISMLGVVP 343
The following BLAST results are available for this feature:
BLAST of EY735286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
HEM1_CAMC52.210e-1128.22Glutamyl-tRNA reductase OS=Campylobacter curvus (s... [more]
HEM1_STAAW2.887e-1128.22Glutamyl-tRNA reductase OS=Staphylococcus aureus (... [more]
HEM1_STAAT2.887e-1128.22Glutamyl-tRNA reductase OS=Staphylococcus aureus (... [more]
HEM1_STAAS2.887e-1128.22Glutamyl-tRNA reductase OS=Staphylococcus aureus (... [more]
HEM1_STAAR2.887e-1128.22Glutamyl-tRNA reductase OS=Staphylococcus aureus (... [more]
HEM1_STAAN2.887e-1128.22Glutamyl-tRNA reductase OS=Staphylococcus aureus (... [more]
HEM1_STAAM2.887e-1128.22Glutamyl-tRNA reductase OS=Staphylococcus aureus (... [more]
HEM1_STAAE2.887e-1128.22Glutamyl-tRNA reductase OS=Staphylococcus aureus (... [more]
HEM1_STAAC2.887e-1128.22Glutamyl-tRNA reductase OS=Staphylococcus aureus (... [more]
HEM1_STAA92.887e-1128.22Glutamyl-tRNA reductase OS=Staphylococcus aureus (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735286 ID=EY735286; Name=EY735286; organism=Citrus sinensis; type=EST; length=972bp
CCTGAATCTTCACATGCCACTGCCCGGATGTTGGTTATTGGAGCAGGCAA
GATGGGGAAGCTTGTGATAAAACACTTGGTAGCCAAAGGATGCACTAAGA
TGGTGGTTGTAAACAGGTCAGAAGAGAGAGTTGCAGCCATCTGCGAGGAG
CTCAACGGTGTTGAGATAATTTATAAACCTCTCTCAGAAATGTTGTCCTG
TGCTGCTGATGCAGATGTGGTCTTCACCAGCACAGCATCTGAAGCTCCAT
TATTCTTGAAGGATCATGTTCAGGACCTTCCTCCCGTTGAGGCTGCAGTT
GGGGGTTTGAGGCTCTTTATTGATATCTCCGTTCCTCGTAATGTGGGCTC
TTGTGTTGCAGATGTTGAAACTGCACGGGTTTACAATGTTGATGACCTTA
AGGAGGTAGTGGCTGCTAATAAAGAGGACAGGCTCCGAAAAGCAATGGAA
GCTCAGGCTATTATCACTGAGGAATCAAAACAGTTTGCAGCTTGGAGGGA
TTCATTGGAGACTGTTCCCTACTAATTAGAAATTGAGAGCTTATGCTGAA
GAAATCAGGGTGGGCAAGTTAGAATAAATGCCCTATCAAAAATGGGTGAA
GGAATCCTCAAAAAAAACAAGGAGGGGCTGGCAATGACCTTACCCGTGGT
AATCAGGAATAACCTTCTTTCTGGGGCCCAATGGCACCCTTTGGAAATGG
GGGGGGAATGGAAGCAGGGATTCTAAAGAAAACCCTTGGAAAACTGGGCT
GGCTTAAAAAAAAAAGGGTTGGGCCTTGAAAAAAAAAAACATTTCTCTTT
TCCAAAGAAAAAGGGGTCGGGCGCAAAAAAAAAAAAAAAACCCCAAAAGG
GGGGACTTTTTTGAAAAACAAGGTTTTGTGCAAAGGGGGACCTTTCTTTT
TTCCCTTTCCCCCAAAATAGTAAAAAAAAAAAAAAAAAAAACCCCCTCCC
CCCCCCTTTGTTGTGGGGTGGT
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