EY735286

Overview
NameEY735286
Unique NameEY735286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_THEYD (Glutamyl-tRNA reductase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=hemA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.287e-23
Identity = 63/188 (33.51%), Postives = 109/188 (57.98%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVRINALSK 591
            +L++GAG+M +L ++HL+  G   + + NR+ +R   I +E NGV + +  L E L      D+V  ST +   +  +  ++++ P+         FIDISVPRNV     +++   +YN+DDL++VV +N  +R ++A +A +I+ EE+++F  W +SLE+VP  + I     RN+  QVR   + K
Sbjct:  192 ILLVGAGEMAELALRHLIGSGIKNVYLTNRTFQRAEEIAKEFNGVAVPFGNLKEQL---VKTDIVICSTGAPHYVITEQMLKEVMPLRKHKP--IFFIDISVPRNVDPACNELDNVYLYNIDDLQDVVDSNILERKKEAEKALSIVQEETEKFFQWLNSLESVPVIVSI-----RNKAEQVRQEEIEK 369          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_VIBCM (Glutamyl-tRNA reductase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=hemA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.294e-23
Identity = 64/169 (37.87%), Postives = 104/169 (61.54%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETV 516
            S A A +L++GAG+  +LV KHL    C +M+V NR+ ER  ++ ++  G ++I   L+E+    A AD+V +STAS  P+  K  V+    ++A      L +DI+VPR++   V  +  A +Y+VDDL+ +V +N E R  +A++A+AI++EES  F +W  SL+ V
Sbjct:  177 SLADATVLLVGAGETIELVAKHLAGHHCKRMIVANRTRERALSLAQQF-GADVI--ALNEIPDYLAQADIVISSTASPLPIIGKGMVESA--LKARRHQPMLLVDIAVPRDIEPQVGKLNDAYLYSVDDLQSIVDSNIEQRKVEAIQAEAIVSEESATFMSWMRSLQAV 340          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_VIBCH (Glutamyl-tRNA reductase OS=Vibrio cholerae GN=hemA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.294e-23
Identity = 64/169 (37.87%), Postives = 104/169 (61.54%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETV 516
            S A A +L++GAG+  +LV KHL    C +M+V NR+ ER  ++ ++  G ++I   L+E+    A AD+V +STAS  P+  K  V+    ++A      L +DI+VPR++   V  +  A +Y+VDDL+ +V +N E R  +A++A+AI++EES  F +W  SL+ V
Sbjct:  177 SLADATVLLVGAGETIELVAKHLAGHHCKRMIVANRTRERALSLAQQF-GADVI--ALNEIPDYLAQADIVISSTASPLPIIGKGMVESA--LKARRHQPMLLVDIAVPRDIEPQVGKLNDAYLYSVDDLQSIVDSNIEQRKVEAIQAEAIVSEESATFMSWMRSLQAV 340          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_VIBC3 (Glutamyl-tRNA reductase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=hemA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.294e-23
Identity = 64/169 (37.87%), Postives = 104/169 (61.54%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETV 516
            S A A +L++GAG+  +LV KHL    C +M+V NR+ ER  ++ ++  G ++I   L+E+    A AD+V +STAS  P+  K  V+    ++A      L +DI+VPR++   V  +  A +Y+VDDL+ +V +N E R  +A++A+AI++EES  F +W  SL+ V
Sbjct:  177 SLADATVLLVGAGETIELVAKHLAGHHCKRMIVANRTRERALSLAQQF-GADVI--ALNEIPDYLAQADIVISSTASPLPIIGKGMVESA--LKARRHQPMLLVDIAVPRDIEPQVGKLNDAYLYSVDDLQSIVDSNIEQRKVEAIQAEAIVSEESATFMSWMRSLQAV 340          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_VIBVY (Glutamyl-tRNA reductase OS=Vibrio vulnificus (strain YJ016) GN=hemA PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.565e-23
Identity = 71/192 (36.98%), Postives = 106/192 (55.21%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVRINALSK 591
            +L++GAG+  +LV KHL A GC+KM+V NR+ ER   + E+ +   I  + +   L   A AD+V +STAS  P+  K  V      E A+   R    L +DI+VPR+V + V ++  A +Y VDDL+ ++  N E R  +A++A+AI+ EES  F +W  SL+ V    E      R     +R   LSK
Sbjct:  183 VLLVGAGETIELVAKHLHANGCSKMIVANRTRERALTLAEQFDAQVISLQDIPNHL---AKADIVISSTASPLPIIGKGMV------ETALKQRRHQPMLLVDIAVPRDVEAQVGELNDAYLYTVDDLQSIIDNNIEQRKVEAIQAEAIVAEESAAFMSWLRSLQAVDSIREY-----RQSANDIREELLSK 360          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SHESM (Glutamyl-tRNA reductase OS=Shewanella sp. (strain MR-4) GN=hemA PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.249e-22
Identity = 66/170 (38.82%), Postives = 96/170 (56.47%), Query Frame = 1
Query:    7 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETV 516
            SS +T ++L+IGAG+  +LV KHL   G   MVV NR+ ER  ++CEE N   I    + + L     AD+V +STAS  P+  K  V+    ++       L +DI+VPR++   VAD++ A +Y VDDL  ++  NK  R   A +A+ I  E+S  F  W  SLE+V
Sbjct:  174 SSLSTTKVLLIGAGETIELVAKHLKDNGVASMVVANRTLERAQSMCEEFNATAITLAQIPDFLP---KADIVISSTASPLPILGKGMVEKA--LKQRRHQPMLLVDIAVPRDIEPEVADLDDAFLYTVDDLHSIIEQNKASRKEAAEQAELITEEQSHLFMEWVRSLESV 338          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SHEON (Glutamyl-tRNA reductase OS=Shewanella oneidensis GN=hemA PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.249e-22
Identity = 66/170 (38.82%), Postives = 96/170 (56.47%), Query Frame = 1
Query:    7 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETV 516
            SS +T ++L+IGAG+  +LV KHL   G   MVV NR+ ER  ++CEE N   I    + + L     AD+V +STAS  P+  K  V+    ++       L +DI+VPR++   VAD++ A +Y VDDL  ++  NK  R   A +A+ I  E+S  F  W  SLE+V
Sbjct:  174 SSLSTTKVLLIGAGETIELVAKHLKDNGVASMVVANRTLERAQSMCEEFNATAITLAQIPDFLP---KADIVISSTASPLPILGKGMVEKA--LKQRRHQPMLLVDIAVPRDIEPEVADLDDAFLYTVDDLHSIIEQNKASRKEAAEQAELITEEQSHLFMEWVRSLESV 338          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ALISL (Glutamyl-tRNA reductase OS=Aliivibrio salmonicida (strain LFI1238) GN=hemA PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.632e-22
Identity = 75/225 (33.33%), Postives = 120/225 (53.33%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVRINALSKMGEGILK-KNKEGLAMTLPVVIRNNLL 669
            S A + ++++GAG+  +LV KHL   GC +++V NR+ ER   + ++ N   I    + E LS    AD++ +STAS  P+  K  V      E+A+   R    LF+DI+VPR++ S VAD+    +Y+VDDLK ++  N E R  +A++A+AI++EES  F  W  S + V    +      R     +RI  L K  + +   +N E +   L   + N L+
Sbjct:  178 SLAESTVMLVGAGETIELVAKHLNDAGCKQLIVANRTRERAMILADQFNADVISLPEIPEHLS---KADIIISSTASPLPIIGKGMV------ESALKQRRHQPMLFVDIAVPRDIESEVADLNDVYLYSVDDLKSIIDHNIEQRKIEAIQAEAIVSEESAGFMTWIRSRQAVNSIRQY-----RENSESIRIELLQKSIQALASGQNAEKVLAELSNKLTNKLI 388          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SHESR (Glutamyl-tRNA reductase OS=Shewanella sp. (strain MR-7) GN=hemA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.131e-22
Identity = 66/170 (38.82%), Postives = 96/170 (56.47%), Query Frame = 1
Query:    7 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETV 516
            SS +T ++L+IGAG+  +LV KHL   G   MVV NR+ ER  ++CEE N   I    + + L     AD+V +STAS  P+  K  V+    ++       L +DI+VPR++   VAD++ A +Y VDDL  ++  NK  R   A +A+ I  E+S  F  W  SLE+V
Sbjct:  174 SSLSTTKVLLIGAGETIELVAKHLKDNGVASMVVANRTLERAQSMCEEFNATAITLAQIPDFLP---KADIVISSTASPLPILGKGMVEKA--LKQRRHQPMLLVDIAVPRDIEPEVADLDDAFLYTVDDLHSIIEQNKASRKEAAEQAELITEEQSYLFMDWVRSLESV 338          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SHESA (Glutamyl-tRNA reductase OS=Shewanella sp. (strain ANA-3) GN=hemA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.131e-22
Identity = 66/170 (38.82%), Postives = 96/170 (56.47%), Query Frame = 1
Query:    7 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETV 516
            SS +T ++L+IGAG+  +LV KHL   G   MVV NR+ ER  ++CEE N   I    + + L     AD+V +STAS  P+  K  V+    ++       L +DI+VPR++   VAD++ A +Y VDDL  ++  NK  R   A +A+ I  E+S  F  W  SLE+V
Sbjct:  174 SSLSTTKVLLIGAGETIELVAKHLKDNGVASMVVANRTLERAQSMCEEFNATAITLAQIPDFLP---KADIVISSTASPLPILGKGMVEKA--LKQRRHQPMLLVDIAVPRDIEPEVADLDDAFLYTVDDLHSIIEQNKASRKEAAEQAELITEEQSYLFMDWVRSLESV 338          
The following BLAST results are available for this feature:
BLAST of EY735286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
HEM1_THEYD3.287e-2333.51Glutamyl-tRNA reductase OS=Thermodesulfovibrio yel... [more]
HEM1_VIBCM4.294e-2337.87Glutamyl-tRNA reductase OS=Vibrio cholerae serotyp... [more]
HEM1_VIBCH4.294e-2337.87Glutamyl-tRNA reductase OS=Vibrio cholerae GN=hemA... [more]
HEM1_VIBC34.294e-2337.87Glutamyl-tRNA reductase OS=Vibrio cholerae serotyp... [more]
HEM1_VIBVY9.565e-2336.98Glutamyl-tRNA reductase OS=Vibrio vulnificus (stra... [more]
HEM1_SHESM1.249e-2238.82Glutamyl-tRNA reductase OS=Shewanella sp. (strain ... [more]
HEM1_SHEON1.249e-2238.82Glutamyl-tRNA reductase OS=Shewanella oneidensis G... [more]
HEM1_ALISL1.632e-2233.33Glutamyl-tRNA reductase OS=Aliivibrio salmonicida ... [more]
HEM1_SHESR2.131e-2238.82Glutamyl-tRNA reductase OS=Shewanella sp. (strain ... [more]
HEM1_SHESA2.131e-2238.82Glutamyl-tRNA reductase OS=Shewanella sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735286 ID=EY735286; Name=EY735286; organism=Citrus sinensis; type=EST; length=972bp
CCTGAATCTTCACATGCCACTGCCCGGATGTTGGTTATTGGAGCAGGCAA
GATGGGGAAGCTTGTGATAAAACACTTGGTAGCCAAAGGATGCACTAAGA
TGGTGGTTGTAAACAGGTCAGAAGAGAGAGTTGCAGCCATCTGCGAGGAG
CTCAACGGTGTTGAGATAATTTATAAACCTCTCTCAGAAATGTTGTCCTG
TGCTGCTGATGCAGATGTGGTCTTCACCAGCACAGCATCTGAAGCTCCAT
TATTCTTGAAGGATCATGTTCAGGACCTTCCTCCCGTTGAGGCTGCAGTT
GGGGGTTTGAGGCTCTTTATTGATATCTCCGTTCCTCGTAATGTGGGCTC
TTGTGTTGCAGATGTTGAAACTGCACGGGTTTACAATGTTGATGACCTTA
AGGAGGTAGTGGCTGCTAATAAAGAGGACAGGCTCCGAAAAGCAATGGAA
GCTCAGGCTATTATCACTGAGGAATCAAAACAGTTTGCAGCTTGGAGGGA
TTCATTGGAGACTGTTCCCTACTAATTAGAAATTGAGAGCTTATGCTGAA
GAAATCAGGGTGGGCAAGTTAGAATAAATGCCCTATCAAAAATGGGTGAA
GGAATCCTCAAAAAAAACAAGGAGGGGCTGGCAATGACCTTACCCGTGGT
AATCAGGAATAACCTTCTTTCTGGGGCCCAATGGCACCCTTTGGAAATGG
GGGGGGAATGGAAGCAGGGATTCTAAAGAAAACCCTTGGAAAACTGGGCT
GGCTTAAAAAAAAAAGGGTTGGGCCTTGAAAAAAAAAAACATTTCTCTTT
TCCAAAGAAAAAGGGGTCGGGCGCAAAAAAAAAAAAAAAACCCCAAAAGG
GGGGACTTTTTTGAAAAACAAGGTTTTGTGCAAAGGGGGACCTTTCTTTT
TTCCCTTTCCCCCAAAATAGTAAAAAAAAAAAAAAAAAAAACCCCCTCCC
CCCCCCTTTGTTGTGGGGTGGT
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