EY735286

Overview
NameEY735286
Unique NameEY735286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_GEOKA (Glutamyl-tRNA reductase OS=Geobacillus kaustophilus GN=hemA PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.783e-22
Identity = 62/169 (36.69%), Postives = 98/169 (57.99%), Query Frame = 1
Query:   16 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            A   +L+IGAGKMG L  ++L   G  K+ VVNR+ E+   + ++  G     KPL E+     +AD+V +ST ++  +  K+ V    P+E    G  LF +DI+VPR++   +AD+ET  +Y++DDL++VVAAN  +R + A   + +I  E   F+ W  +L  VP
Sbjct:  181 AGKHVLIIGAGKMGTLAAQNLYGSGVGKVTVVNRTLEKAKQLAKQFAGEA---KPLGELSCALLEADIVISSTGAKGYILTKEMVA---PLEKMRKGRPLFMVDIAVPRDLDPALADLETVFLYDIDDLQDVVAANLAERQKAAARIETMIEAELMAFSQWLQTLGVVP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_VIBFM (Glutamyl-tRNA reductase OS=Vibrio fischeri (strain MJ11) GN=hemA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 6.200e-22
Identity = 60/169 (35.50%), Postives = 100/169 (59.17%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETV 516
            S + + +L++GAG+  +LV KHL   GC +++V NR+ ER   + E+ N   I    + E L     AD++ +STAS  P+  K  V+    ++       LF+DI+VPR++   VA++  A +Y+VDDL+ ++  N E R  +A++A+AI++EES +F  W  S + V
Sbjct:  178 SLSDSTVLLVGAGETIELVAKHLDDSGCKRLIVANRTRERAMGLAEQFNAEVISLPEIPEHLP---KADIIISSTASPLPIIGKGMVESA--LKLRKHQPMLFVDIAVPRDIEGEVAELNDAYLYSVDDLQSIIDHNIEQRKIEAIQAEAIVSEESAEFMTWIRSRQAV 341          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_VIBF1 (Glutamyl-tRNA reductase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=hemA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 6.200e-22
Identity = 60/169 (35.50%), Postives = 100/169 (59.17%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETV 516
            S + + +L++GAG+  +LV KHL   GC +++V NR+ ER   + E+ N   I    + E L     AD++ +STAS  P+  K  V+    ++       LF+DI+VPR++   VA++  A +Y+VDDL+ ++  N E R  +A++A+AI++EES +F  W  S + V
Sbjct:  178 SLSDSTVLLVGAGETIELVAKHLDDSGCKRLIVANRTRERAMGLAEQFNAEVISLPEIPEHLP---KADIIISSTASPLPIIGKGMVESA--LKLRKHQPMLFVDIAVPRDIEGEVAELNDAYLYSVDDLQSIIDHNIEQRKIEAIQAEAIVSEESAEFMTWIRSRQAV 341          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_MYXXD (Glutamyl-tRNA reductase OS=Myxococcus xanthus (strain DK 1622) GN=hemA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 6.200e-22
Identity = 64/201 (31.84%), Postives = 105/201 (52.24%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVRINALSKMGEGILKKNKEGL 630
            +LV+GAG+MG+L  +HL   G +K+ V NR+  R  A+  E+ G     +P  E+L   A ADVV  STAS+APLF +D+V  L       G     +D++VPR++   V  ++    Y+VDD+++ VA N   R  +A +A  ++ +E  +F   R   E  P    +          +V    L  +G+G+ +K ++ +
Sbjct:  180 VLVVGAGEMGELAARHLKQAGASKLYVTNRTLSRAEALAAEVGGQA---RPFEELLGLVAAADVVVCSTASQAPLFTRDNVGALG--RGRRGRPLFMVDLAVPRDIDPAVGTLDWVHAYDVDDIQKFVADNAAARAEEAQKAGVLVAQEVARFVKERALREGTPVLARLRQRAEAIARSEVE-RTLGALGDGLNEKQRKSI 374          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_GLOVI (Glutamyl-tRNA reductase OS=Gloeobacter violaceus GN=hemA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 6.200e-22
Identity = 66/215 (30.70%), Postives = 120/215 (55.81%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVRINALSKMGEGILKKNKEGLAMTLPVVIRNNLL 669
            R LV+GAGKMG+L+++HL+AKG  +++V+NRS E+ A + E+  G+ +    + E+ +    +D++FT T +  PL   + +  L   ++      +  DI+VPRNV + V ++   +++NVD LK+VV  N+  R     + + I+ E+  +F  W   LE VP   ++       +  ++   ALS++G    +K+ +G+  +L   I N +L
Sbjct:  184 RCLVVGAGKMGELLVRHLLAKGARQIIVLNRSLEKAAQMVEQF-GLMLPVATVDELTNYVPCSDLIFTCTGATEPLLTLEKMSSLRRDQSL-----MIFDIAVPRNVATEVDELPNVQLFNVDHLKQVVEENRAYRQLMVTQCEEILLEQLDEFLDWWRGLEAVPTINQLRQKVETIREQELE-KALSRLGTEFAEKH-QGIIDSLTRAIVNKIL 390          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SHEPA (Glutamyl-tRNA reductase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=hemA PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 8.097e-22
Identity = 72/223 (32.29%), Postives = 121/223 (54.26%), Query Frame = 1
Query:    7 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LE--IESLC*RNQGGQVRINALSKMGEGILKKNKEGLAMTLPVVIRNNLL 669
            SS +T ++L++GAG+  +LV +HL   G T MVV NR+  R  A+CEE     I  + + + L     AD+V +STAS  P+  K  V+    ++       L +DI+VPR++ + VAD++ A +Y VDDL+ ++  N   R   A +A+ I  +++ QF  W  SLE+V    E   +S+  +++  +  +N L++ G      N E + + L   + N L+
Sbjct:  174 SSISTTQVLLVGAGETIELVARHLKDNGVTTMVVANRTISRAEAMCEEFGATAITLEQIPDFLP---KADIVISSTASPLPILGKGMVEKA--LKQRRHQPMLLVDIAVPRDIEAEVADLDDAFLYTVDDLQSIIEQNMASRREAAEQAELIAEDQAYQFMEWIRSLESVDSIREYRTKSMAIKDELVERAVNKLAQGG------NSEQVLLELANKLTNKLI 385          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SHELP (Glutamyl-tRNA reductase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=hemA PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 8.097e-22
Identity = 73/223 (32.74%), Postives = 119/223 (53.36%), Query Frame = 1
Query:    7 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEI--ESLC*RNQGGQVRINALSKMGEGILKKNKEGLAMTLPVVIRNNLL 669
            S+ +  ++L+IGAG+  +LV +HL   G   M+V NR+  R  A+CEE     I  + + + L     AD+V +STAS  P+  K  V+    ++       L +DI+VPR++ + VAD++ A +Y VDDL+ ++  N   R   A +A+ I+ EES  F  W  SLE+V    E   +S+  R++  +  IN L++ G+       E L + L   + N L+
Sbjct:  174 SALSATKVLLIGAGETIELVARHLKDNGVDSMIVANRTISRAEAMCEEFGATAITLEQIPDFLP---KADIVISSTASPLPILGKGMVEKA--LKQRRHQPMLLVDIAVPRDIEAEVADLDDAFLYTVDDLQSIIEQNMASRREAAEKAELIVEEESHHFMEWIRSLESVDSIREYRSQSMAIRDELVERAINKLAQGGD------SEQLILELANKLTNKLI 385          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_MOOTA (Glutamyl-tRNA reductase OS=Moorella thermoacetica (strain ATCC 39073) GN=hemA PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 8.097e-22
Identity = 70/217 (32.26%), Postives = 116/217 (53.46%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVRINALSKMGEGILKKNKEGLAMTLPVVIRNNLLSGA 678
            +LVIGAGKM  L  ++L  KG T ++V NRS +R  A+   + G  +    L + L     AD+V + TA+   +  +D V     V A  G   + IDI+VPR++     D+   ++Y++DDL++VV AN E+R + A +A+ II  E++ F  W  SL  VP  + ++      +  +VR  A +++G+  L   ++ +  ++   I N LL  A
Sbjct:  186 VLVIGAGKMSTLAARYLKDKGVTTVLVSNRSYDRAVALAATIGGQAVRLDALEDYLP---RADIVISCTAASHYILHRDQVARA--VAARPGVPLMLIDIAVPRDIEPAAGDLPGVKLYDIDDLQQVVLANLEERKKAARQAEGIIAAEAEAFFQWLGSLYVVPTIVALKEKAEAIKNAEVR-RACNRLGQ--LTTREQKIITSMATTIVNQLLHDA 394          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SHEFN (Glutamyl-tRNA reductase OS=Shewanella frigidimarina (strain NCIMB 400) GN=hemA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.804e-21
Identity = 74/221 (33.48%), Postives = 116/221 (52.49%), Query Frame = 1
Query:    7 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVRINALSKMGEGILKKNKEGLAMTLPVVIRNNLL 669
            SS +T ++L+IGAG+  +LV KHL   G   MVV NR+ ER  A+CEE N   I  + + + L     AD+V +STAS  P+  K  V+    ++       L +DI+VPR++ + V +++ A +Y VDDL  ++  N   R   A +A+ I  ++S  F  W  SLE+V    E  S     +   V   AL+K+ +G    + E + + L   + N L+
Sbjct:  174 SSLSTTKVLLIGAGETIELVAKHLKDNGVASMVVANRTIERAQAMCEEFNATAITLEQIPDFL---PKADIVISSTASPLPILGKGMVE--KALKQRRHQPMLLVDIAVPRDIEAEVGELDDAFLYTVDDLHSIIEQNMASRKEAAEQAELITEDQSHIFMEWIRSLESVDSIREYRSQSLAIKDELVE-RALNKLSQG---SDSEQVILELANRLTNRLI 385          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SYNR3 (Glutamyl-tRNA reductase OS=Synechococcus sp. (strain RCC307) GN=hemA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.356e-21
Identity = 70/222 (31.53%), Postives = 118/222 (53.15%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVR----INALSKMGEGILKKNKEGLAMTLPVVIRNNLLSG 675
            ++ V+GAG+M +L+++HL +KG   + VVNR+  +   + ++   + I    L ++ +  A   ++FTST ++ P+       D   ++A     RL  +DI VPRN+ S  ADV     Y+VDDL+EVV  N   R + A +A+ ++ E+ + F  W D LE VP    I  +  R Q  ++R    + ALS+MG    ++ K+ +   L   + N +L G
Sbjct:  193 KVAVVGAGRMARLLLQHLQSKGARSITVVNRTVAKAEVLAKDFPDLVITCCGLDQLDAQLASNTLLFTSTGADEPII------DRQRLDAITRQARLMLVDIGVPRNISSDAADVSGTLSYDVDDLQEVVERNVAARQQLAQQAEVLLDEDRQAFLDWWDGLEAVP---TINRM--RQQFEEIRKQELLKALSRMGSDFSQREKQ-VVEALTKGLINKILHG 402          
The following BLAST results are available for this feature:
BLAST of EY735286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
HEM1_GEOKA2.783e-2236.69Glutamyl-tRNA reductase OS=Geobacillus kaustophilu... [more]
HEM1_VIBFM6.200e-2235.50Glutamyl-tRNA reductase OS=Vibrio fischeri (strain... [more]
HEM1_VIBF16.200e-2235.50Glutamyl-tRNA reductase OS=Vibrio fischeri (strain... [more]
HEM1_MYXXD6.200e-2231.84Glutamyl-tRNA reductase OS=Myxococcus xanthus (str... [more]
HEM1_GLOVI6.200e-2230.70Glutamyl-tRNA reductase OS=Gloeobacter violaceus G... [more]
HEM1_SHEPA8.097e-2232.29Glutamyl-tRNA reductase OS=Shewanella pealeana (st... [more]
HEM1_SHELP8.097e-2232.74Glutamyl-tRNA reductase OS=Shewanella loihica (str... [more]
HEM1_MOOTA8.097e-2232.26Glutamyl-tRNA reductase OS=Moorella thermoacetica ... [more]
HEM1_SHEFN1.804e-2133.48Glutamyl-tRNA reductase OS=Shewanella frigidimarin... [more]
HEM1_SYNR32.356e-2131.53Glutamyl-tRNA reductase OS=Synechococcus sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735286 ID=EY735286; Name=EY735286; organism=Citrus sinensis; type=EST; length=972bp
CCTGAATCTTCACATGCCACTGCCCGGATGTTGGTTATTGGAGCAGGCAA
GATGGGGAAGCTTGTGATAAAACACTTGGTAGCCAAAGGATGCACTAAGA
TGGTGGTTGTAAACAGGTCAGAAGAGAGAGTTGCAGCCATCTGCGAGGAG
CTCAACGGTGTTGAGATAATTTATAAACCTCTCTCAGAAATGTTGTCCTG
TGCTGCTGATGCAGATGTGGTCTTCACCAGCACAGCATCTGAAGCTCCAT
TATTCTTGAAGGATCATGTTCAGGACCTTCCTCCCGTTGAGGCTGCAGTT
GGGGGTTTGAGGCTCTTTATTGATATCTCCGTTCCTCGTAATGTGGGCTC
TTGTGTTGCAGATGTTGAAACTGCACGGGTTTACAATGTTGATGACCTTA
AGGAGGTAGTGGCTGCTAATAAAGAGGACAGGCTCCGAAAAGCAATGGAA
GCTCAGGCTATTATCACTGAGGAATCAAAACAGTTTGCAGCTTGGAGGGA
TTCATTGGAGACTGTTCCCTACTAATTAGAAATTGAGAGCTTATGCTGAA
GAAATCAGGGTGGGCAAGTTAGAATAAATGCCCTATCAAAAATGGGTGAA
GGAATCCTCAAAAAAAACAAGGAGGGGCTGGCAATGACCTTACCCGTGGT
AATCAGGAATAACCTTCTTTCTGGGGCCCAATGGCACCCTTTGGAAATGG
GGGGGGAATGGAAGCAGGGATTCTAAAGAAAACCCTTGGAAAACTGGGCT
GGCTTAAAAAAAAAAGGGTTGGGCCTTGAAAAAAAAAAACATTTCTCTTT
TCCAAAGAAAAAGGGGTCGGGCGCAAAAAAAAAAAAAAAACCCCAAAAGG
GGGGACTTTTTTGAAAAACAAGGTTTTGTGCAAAGGGGGACCTTTCTTTT
TTCCCTTTCCCCCAAAATAGTAAAAAAAAAAAAAAAAAAAACCCCCTCCC
CCCCCCTTTGTTGTGGGGTGGT
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