EY735286

Overview
NameEY735286
Unique NameEY735286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SHEB2 (Glutamyl-tRNA reductase OS=Shewanella baltica (strain OS223) GN=hemA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.953e-21
Identity = 64/170 (37.65%), Postives = 93/170 (54.71%), Query Frame = 1
Query:    7 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETV 516
            SS +T ++L+IGAG+  +LV KHL   G   MVV NR+ ER   +CEE     I    + + L     AD+V +STAS  P+  K  V+    ++       L +DI+VPR++   VAD++ A +Y VDDL  ++  N   R   A +A+ I  E+S  F  W  SLE+V
Sbjct:  174 SSISTTKVLLIGAGETIELVAKHLKDNGVASMVVANRTLERAQGMCEEFGATAITLAQIPDYLP---KADIVISSTASPLPILGKGMVEKA--LKQRRHQPMLLVDIAVPRDIEPEVADLDDAFLYTVDDLHSIIEQNMASRKEAAEQAEVITEEQSFLFMDWIRSLESV 338          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_DESRM (Glutamyl-tRNA reductase OS=Desulfotomaculum reducens (strain MI-1) GN=hemA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.953e-21
Identity = 64/196 (32.65%), Postives = 107/196 (54.59%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVRINALSKMGEGILKK 615
            +LV+GAG+M +L + +LVA G + ++V NRS +R   + E+ +G  + +  L + ++    AD+V +STA++  +     +Q +  +E  V    + IDI+VPR++   V  +   ++Y+VD L+ VV AN E+R R A++A+ II EE  +F  W  +   VP                  I AL KMGE I ++
Sbjct:  185 VLVVGAGEMSELTVVNLVANGVSSVIVSNRSYDRAVQLAEKFDGTAVKFDQLFQYMN---RADIVISSTAAQHYVIKTSDMQKV--MEQRVDQPIMMIDIAVPRDIDPEVRRIPNVKLYDVDHLQNVVDANLEERRRAAVQAEGIIEEELNEFMRWLSTRFVVP-----------------TITALKKMGEEIKQR 358          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_DESVM (Glutamyl-tRNA reductase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=hemA PE=3 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 1.169e-20
Identity = 54/165 (32.73%), Postives = 97/165 (58.79%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            + ++IGAG+M +L   HL+  G  +++V NR+ ER   +  +  G  ++++ LS  L   A+AD++ +ST +  P+     ++D+  ++        FIDI+VPR++   V +++   +Y++DDLKEVV  N   R  +A +A++I+ EE+  FA W  SL+  P
Sbjct:  184 KAMLIGAGEMAELAATHLLNSGIREIMVANRTFERGLQLARQFKGEAVLFQDLSVRL---AEADIIISSTGAHEPIIRARDIKDV--LKRRKNRPMFFIDIAVPRDIDPDVNNLDNVYLYDIDDLKEVVEENMAQRRDEAAKARSIVEEEAGNFAKWLKSLDLQP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_DESHY (Glutamyl-tRNA reductase OS=Desulfitobacterium hafniense (strain Y51) GN=hemA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.527e-20
Identity = 65/194 (33.51%), Postives = 113/194 (58.25%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVR----INALSKMG 597
            +L++GAG+M  L  KHLVA G   ++V NRS +R  A+ EE +G  I Y+ L   L   A+AD+V ++TA+   +   + ++ +  +E       L IDI+VPR++   V ++E   ++++DDL+ VV ++++ R   A++A  I+ EE  +F  W +SL  VP  + ++      +G +VR     +AL+K+G
Sbjct:  185 ILILGAGEMSALTAKHLVASGADTVLVSNRSMQRAQALAEEFSGRAIPYEELDTAL---AEADIVISATAAAHFVIKPERMRRV--MEQRRQRALLLIDIAVPRDIHPNVGELEGVTLFDIDDLRGVVDSHQKAREEAALQAGRILEEEMGRFVKWHNSLYVVPTIVALQ-----RRGEEVREIMLKSALNKLG 368          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_DESHD (Glutamyl-tRNA reductase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=hemA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.527e-20
Identity = 65/194 (33.51%), Postives = 113/194 (58.25%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVR----INALSKMG 597
            +L++GAG+M  L  KHLVA G   ++V NRS +R  A+ EE +G  I Y+ L   L   A+AD+V ++TA+   +   + ++ +  +E       L IDI+VPR++   V ++E   ++++DDL+ VV ++++ R   A++A  I+ EE  +F  W +SL  VP  + ++      +G +VR     +AL+K+G
Sbjct:  185 ILILGAGEMSALTAKHLVASGADTVLVSNRSMQRAQALAEEFSGRAIPYEELDTAL---AEADIVISATAAAHFVIKPERMRRV--MEQRRQRALLLIDIAVPRDIHPNVGELEGVTLFDIDDLRGVVDSHQKAREEAALQAGRILEEEMGRFVKWHNSLYVVPTIVALQ-----RRGEEVREIMLKSALNKLG 368          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_BACWK (Glutamyl-tRNA reductase OS=Bacillus weihenstephanensis (strain KBAB4) GN=hemA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.527e-20
Identity = 57/165 (34.55%), Postives = 98/165 (59.39%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +L++GAGKMG+L +++L   G  K+ V+NR+  +   + E+  G     KPLSE+     +AD++ +ST +   +  K+    +  VE    G  LF +DI+VPR++   + ++E + +Y++DDL+ VV AN+ +RL++A + Q +I EE   F  W  +L  VP
Sbjct:  185 VLILGAGKMGELALQNLYGSGARKVTVMNRTLTKAEVMAEKYMGHA---KPLSELQCALLEADILISSTGASEYVITKEM---MTKVERMRSGRPLFMVDIAVPRDIDPAIDELEGSFLYDIDDLQGVVEANRAERLKEAEKIQFMIEEEMVLFKTWLSTLGVVP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_BACCN (Glutamyl-tRNA reductase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=hemA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.527e-20
Identity = 58/165 (35.15%), Postives = 101/165 (61.21%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +L++GAGKMG+L +++L   G  K+ V+NR+  +   + E+  G     KPLSE+     +AD++ +ST S   +  K+ ++    VE    G  LF +DI+VPR++   + ++E + +Y++DDL++VV AN+ +RL++A + Q +I EE   F  W ++L  VP
Sbjct:  185 VLILGAGKMGELALQNLYGSGVQKVTVMNRTFTKAETMAEKYMGHA---KPLSELQCALLEADILISSTGSSNYVITKEMMKK---VERMRSGRPLFMVDIAVPRDIDPEINELEGSFLYDIDDLQDVVEANRAERLKEAEKIQFMIEEEIVLFKNWLNTLGVVP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SHESH (Glutamyl-tRNA reductase OS=Shewanella sediminis (strain HAW-EB3) GN=hemA PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.994e-20
Identity = 71/223 (31.84%), Postives = 117/223 (52.47%), Query Frame = 1
Query:    7 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIE--SLC*RNQGGQVRINALSKMGEGILKKNKEGLAMTLPVVIRNNLL 669
            SS +T ++L++GAG+  +LV +HL   G   MVV NR+  R   +CEE     I  + + + L     AD+V +STAS  P+  K  V+    ++       L +DI+VPR++ + VA+++ A +Y VDDL+ ++  N   R   A +A+ I  E+S  F  W  SLE+V    E    S+  +++  +  IN L++ G+       E L + L   + N L+
Sbjct:  174 SSLSTTKVLLVGAGETIELVARHLKDNGVDSMVVANRTLSRAEGMCEEFGATAITLEQIPDYLP---QADIVISSTASPLPILGKGMVEKA--LKQRRHQPMLLVDIAVPRDIEAEVAELDDAFLYTVDDLQSIIEQNMASRREAAEQAEVIAEEQSHLFMEWVRSLESVDSIREYRTASMAIKDELVERAINKLAQGGD------SEKLLLELANKLTNKLI 385          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_GEOUR (Glutamyl-tRNA reductase OS=Geobacter uraniireducens (strain Rf4) GN=hemA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.994e-20
Identity = 60/164 (36.59%), Postives = 93/164 (56.71%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +++IGAG+M +L  KH +  G   ++V NR+ ER   + EE +G  + Y+ L + L     AD+V +ST +   +    +V+++  +         FIDI+VPR++   V DVE   +Y VDDL  VVA N E R ++A +A+AI+ +E  QF  W  SLE  P
Sbjct:  185 VMLIGAGEMCELAAKHFINTGVRGVMVTNRTFERAVKLAEEFDGKAVNYEELFDHLH---KADIVLSSTGAPHFIIGPKNVEEV--IRRRKMKPMFFIDIAVPRDIDPKVNDVENIYLYTVDDLNGVVATNLEQRNKEAEKAEAIVEQEIGQFFKWLSSLEVTP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_GEOSF (Glutamyl-tRNA reductase OS=Geobacter sp. (strain FRC-32) GN=hemA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.994e-20
Identity = 57/164 (34.76%), Postives = 92/164 (56.10%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +++IGAG+M +L  KH +  G   ++V NR+ ER   + EE +G  + Y+ L + L     AD++ +ST +   +     ++D+  +         FIDI+VPR++   V D+E   +Y VDDL  VVA N E R +++ +A+AI+ +E  QF  W  SLE  P
Sbjct:  185 VMLIGAGEMCELAAKHFINTGVRGVMVTNRTFERAVKLAEEFDGKAVNYEDLFDQLH---KADIILSSTGAPHFIIKPKDIEDV--IRRRKLKPMFFIDIAVPRDIDPKVNDIENIYLYTVDDLNGVVATNLEQRKKESEKAEAIVEQEIGQFFKWLSSLEVTP 343          
The following BLAST results are available for this feature:
BLAST of EY735286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
HEM1_SHEB28.953e-2137.65Glutamyl-tRNA reductase OS=Shewanella baltica (str... [more]
HEM1_DESRM8.953e-2132.65Glutamyl-tRNA reductase OS=Desulfotomaculum reduce... [more]
HEM1_DESVM1.169e-2032.73Glutamyl-tRNA reductase OS=Desulfovibrio vulgaris ... [more]
HEM1_DESHY1.527e-2033.51Glutamyl-tRNA reductase OS=Desulfitobacterium hafn... [more]
HEM1_DESHD1.527e-2033.51Glutamyl-tRNA reductase OS=Desulfitobacterium hafn... [more]
HEM1_BACWK1.527e-2034.55Glutamyl-tRNA reductase OS=Bacillus weihenstephane... [more]
HEM1_BACCN1.527e-2035.15Glutamyl-tRNA reductase OS=Bacillus cereus subsp. ... [more]
HEM1_SHESH1.994e-2031.84Glutamyl-tRNA reductase OS=Shewanella sediminis (s... [more]
HEM1_GEOUR1.994e-2036.59Glutamyl-tRNA reductase OS=Geobacter uraniireducen... [more]
HEM1_GEOSF1.994e-2034.76Glutamyl-tRNA reductase OS=Geobacter sp. (strain F... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735286 ID=EY735286; Name=EY735286; organism=Citrus sinensis; type=EST; length=972bp
CCTGAATCTTCACATGCCACTGCCCGGATGTTGGTTATTGGAGCAGGCAA
GATGGGGAAGCTTGTGATAAAACACTTGGTAGCCAAAGGATGCACTAAGA
TGGTGGTTGTAAACAGGTCAGAAGAGAGAGTTGCAGCCATCTGCGAGGAG
CTCAACGGTGTTGAGATAATTTATAAACCTCTCTCAGAAATGTTGTCCTG
TGCTGCTGATGCAGATGTGGTCTTCACCAGCACAGCATCTGAAGCTCCAT
TATTCTTGAAGGATCATGTTCAGGACCTTCCTCCCGTTGAGGCTGCAGTT
GGGGGTTTGAGGCTCTTTATTGATATCTCCGTTCCTCGTAATGTGGGCTC
TTGTGTTGCAGATGTTGAAACTGCACGGGTTTACAATGTTGATGACCTTA
AGGAGGTAGTGGCTGCTAATAAAGAGGACAGGCTCCGAAAAGCAATGGAA
GCTCAGGCTATTATCACTGAGGAATCAAAACAGTTTGCAGCTTGGAGGGA
TTCATTGGAGACTGTTCCCTACTAATTAGAAATTGAGAGCTTATGCTGAA
GAAATCAGGGTGGGCAAGTTAGAATAAATGCCCTATCAAAAATGGGTGAA
GGAATCCTCAAAAAAAACAAGGAGGGGCTGGCAATGACCTTACCCGTGGT
AATCAGGAATAACCTTCTTTCTGGGGCCCAATGGCACCCTTTGGAAATGG
GGGGGGAATGGAAGCAGGGATTCTAAAGAAAACCCTTGGAAAACTGGGCT
GGCTTAAAAAAAAAAGGGTTGGGCCTTGAAAAAAAAAAACATTTCTCTTT
TCCAAAGAAAAAGGGGTCGGGCGCAAAAAAAAAAAAAAAACCCCAAAAGG
GGGGACTTTTTTGAAAAACAAGGTTTTGTGCAAAGGGGGACCTTTCTTTT
TTCCCTTTCCCCCAAAATAGTAAAAAAAAAAAAAAAAAAAACCCCCTCCC
CCCCCCTTTGTTGTGGGGTGGT
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