EY735209

Overview
NameEY735209
Unique NameEY735209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: HAOX2_MOUSE (Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.871e-25
Identity = 77/232 (33.19%), Postives = 116/232 (50.00%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPG-IRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPAPILGPGRGCESYSGAFSCVLGWVGVRGRTGCLQAFGLG 695
            PI I+P+A   +A  +GE               +SS+++ +VE++ +  PG + +FQLYV  D ++  Q+V+R E  GFKA+ +TVD P LG R  + ++   L   + LK+ +     K      SGL   ++     S  W D+  LQ++T+LPI++KG+LT ED              SNHG RQLD VPA I        + +G     +   GVR     L+A  LG
Sbjct:   72 PICISPTAFHSIAWADGEKSTAKAAQKANICYVISSYASYTVEDIVAAAPGGLHWFQLYVQPDWDINKQMVQRIEALGFKALVVTVDAPVLGNRRGNKRSLLDLEANIKLKDLRSPGESK------SGLPTPLS-MPSSSSCWNDLPLLQSMTRLPIILKGILTKEDAELAVKHNIRGIIVSNHGGRQLDEVPASIDALREVVAAVNGKIEVYMDG-GVRTGNDVLKALALG 295          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: CYB2_YEAST (Cytochrome b2, mitochondrial OS=Saccharomyces cerevisiae GN=CYB2 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.924e-23
Identity = 71/201 (35.32%), Postives = 107/201 (53.23%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHP-EGEYXXXXXXXXXGT-----IMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPAPI 587
            P  ++ +A+ K+ +P EGE           T     I TL+S S   + E A +   I+++QLYV  DR +   LV+  E+ G KA+ +TVD P LG+RE D+K +F+     T    + +    ++E+   G +  ++  ID SL+WKD++ L+  TKLPI++KGV   ED              SNHG RQLD+  API
Sbjct:  271 PFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFS----NTKAGPKAMKKTNVEES--QGASRALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPI 465          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD2_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 2 OS=Mycobacterium tuberculosis GN=lldD2 PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.529e-21
Identity = 64/211 (30.33%), Postives = 102/211 (48.34%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNF----------------QGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPAP 584
            P  IAP+   ++ H EGE          G   +LS+ +T ++E++    P G ++FQLY+++DR+    LVRR   AGF  + +TVD P  G R  D++N  ++PP LTL+                  + L    +D    + +  Y+    D SL++ D+ W+++     ++VKG+ T +D              SNHG RQLD  P P
Sbjct:  103 PFGIAPTGFTRLMHTEGEIAGARAAAAAGIPFSLSTLATCAIEDLVIAVPQGRKWFQLYMWRDRDRSMALVRRVAAAGFDTMLVTVDVPVAGARLRDVRNGMSIPPALTLRTVLDAMGHPRWWFDLLTTEPLAFASLDRWPGT-VGEYLNTVFDPSLTFDDLAWIKSQWPGKLVVKGIQTLDDARAVVDRGVDGIVLSNHGGRQLDRAPVP 312          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_PSEE4 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas entomophila (strain L48) GN=lldD PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.692e-20
Identity = 66/212 (31.13%), Postives = 96/212 (45.28%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            P+ +AP  +  M    GE          G   T+S+ S   +EEVA       +FQLYV KDR  +   + RA+ AG K +  TVD P  G R  D  +  + P     + +Q +                DLG + +   N +GLA Y+       D S+SWKD++W++     P+++KG+L A+D              SNHG RQLD V
Sbjct:   72 PVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAPLRRVWQAMTHPQWALDVGLLGRPHDLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREFWDGPMIIKGILDADDARDAVKFGADGIVVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_ERWCT (L-lactate dehydrogenase [cytochrome] OS=Erwinia carotovora subsp. atroseptica GN=lldD PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.483e-19
Identity = 66/212 (31.13%), Postives = 96/212 (45.28%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            P+++AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SW+D+ W++   K P+++KG+L  ED              SNHG RQLD V
Sbjct:   72 PVVLAPVGLTGMYARRGEVQAARAAAQKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRSALERAQAAGVKTLVFTVDMPTPGARYRDAHSGMSGPNAAARRMLQAVTHPQWAWDVGLNGKPHDLGNVSAYRGKPTTLEDYIGWLAANFDPSISWQDLAWIREFWKGPMIIKGILDPEDAKEAVRFGADGIVVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_PSEFS (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas fluorescens (strain SBW25) GN=lldD PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.936e-19
Identity = 63/212 (29.72%), Postives = 93/212 (43.87%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG--------------LAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            P++++P  +  M    GE          G    LS+ S   +EEVAS      +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G M   +D G                 ++A   D S+SWKD++W++   K P+++KG+L  +D              SNHG RQLD V
Sbjct:   72 PVILSPVGLTGMYARRGEVQAAKAAANKGVPFCLSTVSVCPIEEVASQSARAIWFQLYVLKDRGFMRNALERAQAAGVTTLVFTVDMPTPGARYRDAHSGMSGPFAAQRRMLQAMTKPQWAFDVGLMGRPHDLGNISKYLGKPTHLEDYIGWLANNFDPSISWKDLEWIREFWKGPMIIKGILDPQDAKDAVSFGADGIVVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPW (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain W619) GN=lldD PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.529e-19
Identity = 77/273 (28.21%), Postives = 113/273 (41.39%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREAD--------------IKNRFTLPPFLTLKNFQGL--DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPAPILGPGRGCESYSGAFSCVLGWVGVRGRTGCLQAFGLGT---------LWDILWNNQGG 731
            P+ +AP  +  M    GE          G   T+S+ S   +EEVA       +FQLYV KDR  +   + RA+ AG K +  TVD P  G R  D              +    T P +       G   DLG + +   N +GLA Y+       D S+SWKD++W++     P+++KG+L A+D              SNHG RQLD V +         ++  G    +L   G+R     ++   LG          LW +  + Q G
Sbjct:   72 PVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGANGPMRRVLQAMTHPEWAWDVGVMGRPHDLGNISKYRGNPTGLADYIGWLGSNFDPSISWKDLEWIREFWDGPMIIKGILDADDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDLK-ILADSGIRSGLDVVRMIALGADTVLIGRAFLWALAVHGQAG 343          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_YERPY (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=lldD PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.303e-19
Identity = 65/212 (30.66%), Postives = 96/212 (45.28%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            P+++ P  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V
Sbjct:   72 PVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_YERPS (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis GN=lldD PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.303e-19
Identity = 65/212 (30.66%), Postives = 96/212 (45.28%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            P+++ P  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V
Sbjct:   72 PVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_YERPP (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis (strain Pestoides F) GN=lldD PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.303e-19
Identity = 65/212 (30.66%), Postives = 96/212 (45.28%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            P+++ P  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V
Sbjct:   72 PVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGV 283          
The following BLAST results are available for this feature:
BLAST of EY735209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
HAOX2_MOUSE6.871e-2533.19Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2... [more]
CYB2_YEAST4.924e-2335.32Cytochrome b2, mitochondrial OS=Saccharomyces cere... [more]
LLDD2_MYCTU3.529e-2130.33Putative L-lactate dehydrogenase [cytochrome] 2 OS... [more]
LLDD_PSEE48.692e-2031.13L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_ERWCT1.483e-1931.13L-lactate dehydrogenase [cytochrome] OS=Erwinia ca... [more]
LLDD_PSEFS1.936e-1929.72L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEPW2.529e-1928.21L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_YERPY3.303e-1930.66L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPS3.303e-1930.66L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPP3.303e-1930.66L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-110-A06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735209 ID=EY735209; Name=EY735209; organism=Citrus sinensis; type=EST; length=894bp
TGCCAATCATGATTGCCCCATCAGCCATGCAGAAGATGGCTCATCCTGAA
GGGGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGATTATGAC
ATTGTCTTCGTGGTCTACTTCTAGCGTTGAAGAGGTTGCTTCAACAGGAC
CTGGCATCCGCTTTTTCCAGCTCTATGTGTACAAGGACAGGAATGTGGTT
GCTCAGCTTGTGAGAAGGGCTGAAAGAGCCGGATTCAAGGCCATTGCTCT
AACAGTTGATACCCCGAGGCTGGGTCGCAGAGAAGCTGACATCAAGAACA
GATTCACTCTACCACCATTTTTGACATTAAAGAATTTTCAGGGTTTGGAC
CTTGGCAAGATGGACGAGGCAAATGACTCTGGGCTTGCTGCCTATGTTGC
TGGTCAAATTGATCGTTCTCTGAGCTGGAAGGACGTGAAGTGGCTTCAAA
CAATCACCAAATTGCCAATTCTGGTGAAGGGTGTACTCACAGCAGAGGAT
GCGCGGATTGCAGTTCAAGCTGGAGCAGCTGGGATTATTGTATCCAATCA
TGGAGCTCGTCAACTTGACTATGTCCCTGCCCCTATCTTGGGCCCTGGAA
GAGGTTGTGAAAGCTACTCAGGGGCGTTTTCCTGTGTTCTTGGATGGGTG
GGTGTTAGGGGAAGAACTGGTTGTCTTCAAGCATTTGGCCTTGGGACCCT
CTGGGATATTTTATGGAACAACCAAGGGGGGGAACTCTTTGGCCCGCTGA
GGGAAAAAAAGGCCCTCAAAAAAAATCACCCAGAAAGCTTCGCGGAACAA
TTCTAAACCCTCCCACGGCGACTAAGCGCGCTCGACGGGCACCCGCACAC
CAAGTTACTCCTGGCCGGATACCACTCCCGGAGAAGTGGGAAGC
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