EY735209

Overview
NameEY735209
Unique NameEY735209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_BARHE (L-lactate dehydrogenase [cytochrome] OS=Bartonella henselae GN=lldD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.199e-14
Identity = 60/212 (28.30%), Postives = 86/212 (40.57%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREAD--------------IKNRFTLPPFLTLKNFQGL--DLGKMDEANDSGLA-----AYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            PI++AP  +  M    GE          G   TLSS S   + EV        +FQLYV KDR  +  ++ R+  +G + +  TVD P  G R  D              I   F  P +       G   DLG +       +A      ++    D S+ W D++W++   K  +++KG+L  ED              SNHG RQLD V
Sbjct:   72 PIILAPVGLTGMYARRGEVQAARAAVAKGIPFTLSSVSVCPIAEVQKAVGSAFWFQLYVLKDRGFMRDVLERSWASGVRTLVFTVDMPVPGARYRDAHSGMSGSYAGLRRILQAFIHPHWAWNVGIMGRPHDLGNVSTYLQKKIALDDYIGWLGANFDPSIGWHDLQWIRDFWKGKMILKGILDPEDAREAIQFGADGIVVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: YKN3_SCHPO (Uncharacterized lactate 2-monooxygenase PB1A11.03 OS=Schizosaccharomyces pombe GN=SPAPB1A11.03 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.074e-13
Identity = 61/209 (29.19%), Postives = 101/209 (48.33%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVA-STGPGIRFFQLYVYKD--RNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMD---------------EANDSGLAAYVAGQIDRSLS--WKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLD 569
            PI +AP  +QK+ +PEGE               +S+ S +S E++  ++GPG R++QLY   +  +++   L+ RA++ G + + +T+DT  LG R +D+ N +   PFL   +  G++ G  D               E N    A   AG +   +S  W+D+K+L+     PI++KG++   D              SNHG RQ D
Sbjct:  102 PIALAPVGVQKIFNPEGESGSCAAATREHIPYIISTASATSFEDIEKASGPGERWYQLYWPSNDHQDITISLLNRAKKTGCRVLIVTLDTFILGWRPSDMDNGYD--PFLNPDSI-GVEHGFSDPVFRKQFKEKHGVEVEENMLEAAKEFAGIVFPGISHDWEDLKFLRKHWDGPIVLKGIMNVPDAKKAVEYGMQGIVVSNHGGRQQD 307          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LA2M_MYCSM (Lactate 2-monooxygenase OS=Mycobacterium smegmatis PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 3.537e-13
Identity = 53/187 (28.34%), Postives = 88/187 (47.06%), Query Frame = 3
Query:  105 SSWSTSSVEEVAS-TGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIK-------------NRFTLPPFLT-LKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQ-------LDYVPAPILGPG 599
            S+ + SS+E++    G    +FQLY  +DR++    +RRAE AG+  + +T+DT   G R  D+              N  T P F    K   G++   + + N    A +  G    S++W+D+ W+++ITK+P+++KG+   +D              SNHG RQ       LD +P  +   G
Sbjct:  129 STLAVSSLEDIRKHAGDTPAYFQLYYPEDRDLAESFIRRAEEAGYDGLVITLDTWIFGWRPRDLTISNFPFLRGLCLTNYVTDPVFQKKFKAHSGVEAEGLRD-NPRLAADFWHGLFGHSVTWEDIDWVRSITKMPVILKGIQHPDDARRAVDSGVDGIYCSNHGGRQANGGLPALDCLPEVVKASG 314          
The following BLAST results are available for this feature:
BLAST of EY735209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
LLDD_BARHE3.199e-1428.30L-lactate dehydrogenase [cytochrome] OS=Bartonella... [more]
YKN3_SCHPO2.074e-1329.19Uncharacterized lactate 2-monooxygenase PB1A11.03 ... [more]
LA2M_MYCSM3.537e-1328.34Lactate 2-monooxygenase OS=Mycobacterium smegmatis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-110-A06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735209 ID=EY735209; Name=EY735209; organism=Citrus sinensis; type=EST; length=894bp
TGCCAATCATGATTGCCCCATCAGCCATGCAGAAGATGGCTCATCCTGAA
GGGGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGATTATGAC
ATTGTCTTCGTGGTCTACTTCTAGCGTTGAAGAGGTTGCTTCAACAGGAC
CTGGCATCCGCTTTTTCCAGCTCTATGTGTACAAGGACAGGAATGTGGTT
GCTCAGCTTGTGAGAAGGGCTGAAAGAGCCGGATTCAAGGCCATTGCTCT
AACAGTTGATACCCCGAGGCTGGGTCGCAGAGAAGCTGACATCAAGAACA
GATTCACTCTACCACCATTTTTGACATTAAAGAATTTTCAGGGTTTGGAC
CTTGGCAAGATGGACGAGGCAAATGACTCTGGGCTTGCTGCCTATGTTGC
TGGTCAAATTGATCGTTCTCTGAGCTGGAAGGACGTGAAGTGGCTTCAAA
CAATCACCAAATTGCCAATTCTGGTGAAGGGTGTACTCACAGCAGAGGAT
GCGCGGATTGCAGTTCAAGCTGGAGCAGCTGGGATTATTGTATCCAATCA
TGGAGCTCGTCAACTTGACTATGTCCCTGCCCCTATCTTGGGCCCTGGAA
GAGGTTGTGAAAGCTACTCAGGGGCGTTTTCCTGTGTTCTTGGATGGGTG
GGTGTTAGGGGAAGAACTGGTTGTCTTCAAGCATTTGGCCTTGGGACCCT
CTGGGATATTTTATGGAACAACCAAGGGGGGGAACTCTTTGGCCCGCTGA
GGGAAAAAAAGGCCCTCAAAAAAAATCACCCAGAAAGCTTCGCGGAACAA
TTCTAAACCCTCCCACGGCGACTAAGCGCGCTCGACGGGCACCCGCACAC
CAAGTTACTCCTGGCCGGATACCACTCCCGGAGAAGTGGGAAGC
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