EY735209

Overview
NameEY735209
Unique NameEY735209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_PSEP1 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=lldD PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.634e-19
Identity = 67/212 (31.60%), Postives = 94/212 (44.34%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREAD--------------IKNRFTLPPFLTLKNFQGL--DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            P+ +AP  +  M    GE          G   T+S+ S   +EEVA       +FQLYV KDR  +   + RA+ AG K +  TVD P  G R  D              +    T P +       G   DLG + +   N +GLA Y+       D S+SWKD++W++     P+++KG+L A+D              SNHG RQLD V
Sbjct:   72 PVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAINRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGKNGPLRRVLQAMTHPEWAWDVGVMGRPHDLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREFWDGPMIIKGILDADDARDAVKFGADGIVVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_AZOC5 (L-lactate dehydrogenase [cytochrome] OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=lldD PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.358e-19
Identity = 67/212 (31.60%), Postives = 95/212 (44.81%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQ-------GLDLGKMDEANDSG-----------LAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            P+ +AP  +  M    GE          G   TLS+ S   +EEV S      +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  +     T +  Q        LD+G + + +D G           LA Y+   A   D S+SWKD++W+++  K P+++KG+L   D              SNHG RQLD V
Sbjct:   72 PVALAPVGLTGMLARRGEVQAAKAAQAKGVPFTLSTVSVCPIEEVQSQCAKPIWFQLYVLKDRGFMRNALERAQAAGINTLIFTVDMPVPGARYRDAHSGMSGRSGPTRRVLQAMVHPRWALDVGLLGKPHDLGNISTYRGKPTNLADYIGWLAANFDPSISWKDLEWIRSFWKGPMIIKGILDPVDARDAVAFGADGIVVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_XANCP (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas campestris pv. campestris GN=lldD PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.610e-19
Identity = 65/212 (30.66%), Postives = 94/212 (44.34%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEAND-----------SGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            P+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G + + +D           +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V
Sbjct:   72 PVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKTAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAMTHPRWAWDVGLLGKPHDLGNISTYRGSPTGLQDYIGWLAANFDPSISWKDLEWIREFWTGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_XANC8 (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas campestris pv. campestris (strain 8004) GN=lldD PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.610e-19
Identity = 65/212 (30.66%), Postives = 94/212 (44.34%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEAND-----------SGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            P+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G + + +D           +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V
Sbjct:   72 PVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKTAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAMTHPRWAWDVGLLGKPHDLGNISTYRGSPTGLQDYIGWLAANFDPSISWKDLEWIREFWTGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_XANCB (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas campestris pv. campestris (strain B100) GN=lldD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.255e-18
Identity = 65/212 (30.66%), Postives = 94/212 (44.34%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEAND-----------SGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            P+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G + + +D           +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V
Sbjct:   72 PVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPNAPLRRMLQAMTHPRWAWDVGLLGKPHDLGNISTYRGSPTGLQDYIGWLAANFDPSISWKDLEWIREFWTGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_XANP2 (L-lactate dehydrogenase [cytochrome] OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=lldD PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.639e-18
Identity = 67/212 (31.60%), Postives = 93/212 (43.87%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPF-------LTLKNFQGLDLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            P+ +AP  +  M    GE          G   TLS+ S  S+EEV S      +FQLYV KDR  +   + RA  AG + +  TVD P  G R  D  +  + P           L  F   D+G M   +D G ++AY             +    D S+ WKD++W++   K P+++KG+L  ED              SNHG RQLD V
Sbjct:   72 PVGLAPVGLTGMYARRGEVQAAQAATQKGIPFTLSTVSVCSIEEVQSQVGKPIWFQLYVLKDRGFMKNALERAWAAGIRTLVFTVDMPVPGARYRDAHSGMSGPNAAFRRMVQAVLHPFWAYDVGLMGTPHDLGNVSAYRKEKTSLEDYVGWLGNNFDPSIGWKDLEWIREFWKGPMVIKGILDPEDARDAVRFGADGIIVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCM (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae serotype O1 (strain M66-2) GN=lldD PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.639e-18
Identity = 63/212 (29.72%), Postives = 95/212 (44.81%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG--------------LAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            PI ++P  +  M    GE          G   TLS+ S   +EEVA +     +FQLYV KDR  +  ++ RA+ AG K +  TVD P  G R  D+ +  + P     +  Q +       D+G + + +D G                 ++    D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V
Sbjct:   72 PIALSPVGLTGMYARRGEVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAGVKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRVLQAMAHPSWAWDVGLLGKPHDLGNISKYRGSPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMIIKGILDTEDAKDAVRFGADGIVVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCH (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae GN=lldD PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.639e-18
Identity = 63/212 (29.72%), Postives = 95/212 (44.81%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG--------------LAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            PI ++P  +  M    GE          G   TLS+ S   +EEVA +     +FQLYV KDR  +  ++ RA+ AG K +  TVD P  G R  D+ +  + P     +  Q +       D+G + + +D G                 ++    D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V
Sbjct:   72 PIALSPVGLTGMYARRGEVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAGVKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRVLQAMAHPSWAWDVGLLGKPHDLGNISKYRGSPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMIIKGILDTEDAKDAVRFGADGIVVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_SALTY (L-lactate dehydrogenase [cytochrome] OS=Salmonella typhimurium GN=lldD PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.639e-18
Identity = 72/255 (28.24%), Postives = 109/255 (42.75%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPAPILGPGRGCESYSGAFS---CVLGWVGVRGRTGCLQAFGLG 695
            P+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     + +Q +       D+G     +D G ++AY             +A   D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD     +L   R   + + A      +L   G+R     ++   LG
Sbjct:   72 PVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD----GVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALG 322          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_SALTI (L-lactate dehydrogenase [cytochrome] OS=Salmonella typhi GN=lldD PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.639e-18
Identity = 72/255 (28.24%), Postives = 109/255 (42.75%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPAPILGPGRGCESYSGAFS---CVLGWVGVRGRTGCLQAFGLG 695
            P+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     + +Q +       D+G     +D G ++AY             +A   D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD     +L   R   + + A      +L   G+R     ++   LG
Sbjct:   72 PVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTLKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD----GVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALG 322          
The following BLAST results are available for this feature:
BLAST of EY735209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
LLDD_PSEP15.634e-1931.60L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_AZOC57.358e-1931.60L-lactate dehydrogenase [cytochrome] OS=Azorhizobi... [more]
LLDD_XANCP9.610e-1930.66L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_XANC89.610e-1930.66L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_XANCB1.255e-1830.66L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_XANP21.639e-1831.60L-lactate dehydrogenase [cytochrome] OS=Xanthobact... [more]
LLDD_VIBCM1.639e-1829.72L-lactate dehydrogenase [cytochrome] OS=Vibrio cho... [more]
LLDD_VIBCH1.639e-1829.72L-lactate dehydrogenase [cytochrome] OS=Vibrio cho... [more]
LLDD_SALTY1.639e-1828.24L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALTI1.639e-1828.24L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-110-A06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735209 ID=EY735209; Name=EY735209; organism=Citrus sinensis; type=EST; length=894bp
TGCCAATCATGATTGCCCCATCAGCCATGCAGAAGATGGCTCATCCTGAA
GGGGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGATTATGAC
ATTGTCTTCGTGGTCTACTTCTAGCGTTGAAGAGGTTGCTTCAACAGGAC
CTGGCATCCGCTTTTTCCAGCTCTATGTGTACAAGGACAGGAATGTGGTT
GCTCAGCTTGTGAGAAGGGCTGAAAGAGCCGGATTCAAGGCCATTGCTCT
AACAGTTGATACCCCGAGGCTGGGTCGCAGAGAAGCTGACATCAAGAACA
GATTCACTCTACCACCATTTTTGACATTAAAGAATTTTCAGGGTTTGGAC
CTTGGCAAGATGGACGAGGCAAATGACTCTGGGCTTGCTGCCTATGTTGC
TGGTCAAATTGATCGTTCTCTGAGCTGGAAGGACGTGAAGTGGCTTCAAA
CAATCACCAAATTGCCAATTCTGGTGAAGGGTGTACTCACAGCAGAGGAT
GCGCGGATTGCAGTTCAAGCTGGAGCAGCTGGGATTATTGTATCCAATCA
TGGAGCTCGTCAACTTGACTATGTCCCTGCCCCTATCTTGGGCCCTGGAA
GAGGTTGTGAAAGCTACTCAGGGGCGTTTTCCTGTGTTCTTGGATGGGTG
GGTGTTAGGGGAAGAACTGGTTGTCTTCAAGCATTTGGCCTTGGGACCCT
CTGGGATATTTTATGGAACAACCAAGGGGGGGAACTCTTTGGCCCGCTGA
GGGAAAAAAAGGCCCTCAAAAAAAATCACCCAGAAAGCTTCGCGGAACAA
TTCTAAACCCTCCCACGGCGACTAAGCGCGCTCGACGGGCACCCGCACAC
CAAGTTACTCCTGGCCGGATACCACTCCCGGAGAAGTGGGAAGC
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