EY735209

Overview
NameEY735209
Unique NameEY735209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_AGRVS (L-lactate dehydrogenase [cytochrome] OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.652e-18
Identity = 64/212 (30.19%), Postives = 95/212 (44.81%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQ-------GLDLGKMDEANDSG-----------LAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            P+++AP  +  M    GE          G  +TLS+ S   +EEV +      +FQLYV +DR  +   + RA  AG + +  TVD P  G R  D  +  + P     +  Q        +D+G + + +D G           LA YV       D S+ WKD++W++   K P+++KG+L  ED              SNHG RQLD V
Sbjct:   72 PVVLAPVGLTGMYARRGEVQAARAAEKKGIPLTLSTVSVCPIEEVQAASNRPIWFQLYVLRDRGFMKNALERAWAAGIRKLVFTVDMPVPGARYRDAHSGMSGPNASLRRIIQAVMHPTWAIDVGLLGKPHDLGNVSAYRQQKTNLADYVGWLGENFDPSIGWKDLEWIRDFWKGPMIIKGILDPEDAKDAVRFGADGIIVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_STRMK (L-lactate dehydrogenase [cytochrome] OS=Stenotrophomonas maltophilia (strain K279a) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.769e-18
Identity = 64/212 (30.19%), Postives = 92/212 (43.40%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMD--EANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            P+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +     N +GL  Y+       D S+SWKD++W++   K P+++KG+L  +D              SNHG RQLD V
Sbjct:   72 PVALAPVGLTGMYARRGEVQAARAADSRGIPFTLSTVSVCPIEEVAPAIQRPMWFQLYVLRDRGFMRNALERAQAAGVTTLVFTVDMPVPGARYRDAHSGMSGPNASLRRIGQAITHPHWAWDVGLFGRPHDLGNISTYRGNPTGLEDYIGWLGSNFDPSISWKDLEWIREFWKGPMVIKGILDPDDARDAVRFGADGIVVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_STRM5 (L-lactate dehydrogenase [cytochrome] OS=Stenotrophomonas maltophilia (strain R551-3) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.769e-18
Identity = 64/212 (30.19%), Postives = 92/212 (43.40%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMD--EANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            P+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +     N +GL  Y+       D S+SWKD++W++   K P+++KG+L  +D              SNHG RQLD V
Sbjct:   72 PVALAPVGLTGMYARRGEVQAARAADSRGIPFTLSTVSVCPIEEVAPAIQRPMWFQLYVLRDRGFMRNALERAQAAGVTTLVFTVDMPVPGARYRDAHSGMSGPNASLRRIGQAITHPHWAWDVGLFGRPHDLGNISTYRGNPTGLEDYIGWLGSNFDPSISWKDLEWIREFWKGPMVIKGILDPDDARDAVKFGADGIVVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_PSEU2 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.769e-18
Identity = 62/212 (29.25%), Postives = 93/212 (43.87%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQ-------GLDLGKMDEANDSG--------------LAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            PI+++P  +  M    GE               LS+ S  S+EEVAS      +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q        L++G +   +D G                 ++A   D S+SWKD++W++   + P+++KG+L  +D              SNHG RQLD V
Sbjct:   72 PIILSPVGLSGMYARRGEVQVARAAANKRIPFCLSTVSVCSIEEVASQSDQAIWFQLYVLKDRGFMKNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPYAAPRRILQAMTKPDWALNVGLLGRPHDLGNISRYLGKATTLEDYVGWLANNFDPSISWKDLEWIREFWQGPMIIKGILDPQDARDALSFGADGIVVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_PSEAB (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.769e-18
Identity = 64/212 (30.19%), Postives = 91/212 (42.92%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMD--EANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            P+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +     N +GL  Y+       D S++WKD++W++     P+++KG+L  ED              SNHG RQLD V
Sbjct:   72 PVALAPVGLTGMYARRGEVQAARAAAAKGVPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPVPGARYRDAHSGMSGPYAAPRRILQAMTHPAWAWDVGLLGKPHDLGNISAYRGNPTGLEDYIGWLGANFDPSIAWKDLEWIREFWDGPMVIKGILDPEDARDAVKFGADGIVVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_XANAC (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas axonopodis pv. citri GN=lldD PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.229e-18
Identity = 63/212 (29.72%), Postives = 94/212 (44.34%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            P+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G + + +D G ++AY             +    D S++WKD++W++     P+++KG+L  ED              SNHG RQLD V
Sbjct:   72 PVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAVTHPRWAWDVGLLGKPHDLGNISAYRGSPTGLQDYIGWLGANFDPSIAWKDLEWIREFWTGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_KLEP7 (L-lactate dehydrogenase [cytochrome] OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=lldD PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.229e-18
Identity = 65/212 (30.66%), Postives = 94/212 (44.34%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            P  +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     + +Q +       D+G     +D G ++AY             +A   D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V
Sbjct:   72 PTALAPVGLCGMYARRGEVQAAGAADDKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAALRRYWQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_KLEP3 (L-lactate dehydrogenase [cytochrome] OS=Klebsiella pneumoniae (strain 342) GN=lldD PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.229e-18
Identity = 65/212 (30.66%), Postives = 94/212 (44.34%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            P  +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     + +Q +       D+G     +D G ++AY             +A   D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V
Sbjct:   72 PTALAPVGLCGMYARRGEVQAAGAADDKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAALRRYWQAVTHPQWAWDVGLNGRPHDLGNISAYLGQPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGV 283          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_CHRSD (L-lactate dehydrogenase [cytochrome] OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=lldD PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.229e-18
Identity = 72/252 (28.57%), Postives = 107/252 (42.46%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREAD--------------IKNRFTLPPFLTLKNFQGL--DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPAPILGPGRGCESYSGAFSCVLGWVGVRGRTGCLQAFGLG 695
            P+ +AP  +  M    GE          G   TLS+ S   + EVAS      +FQLYV +DR  +  ++ RA+ AG K +  TVD P  G R  D              +    T P +       G   DLG + +     + L  Y+A      D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD VP+         ++  G  + +L   GVR     ++   +G
Sbjct:   72 PVALAPVGLAGMYARRGEVQAARAAASKGIPFTLSTVSVCPIAEVASAIERPLWFQLYVLRDRGFMKHVLERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGKHGGLRRMLQAVTHPSWAWDVGLHGRPHDLGNVSDYRGQPTELEDYIAWLGNNFDPSISWKDLEWIREFWDGPMIIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVPSTARALPAIADAVKGDLA-ILADSGVRNGLDVVRMIAMG 322          
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_XANC5 (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=lldD PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.135e-18
Identity = 63/212 (29.72%), Postives = 93/212 (43.87%), Query Frame = 3
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYV 575
            P+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G +   +D G ++AY             +    D S++WKD++W++     P+++KG+L  ED              SNHG RQLD V
Sbjct:   72 PVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAVTHPRWAWDVGLLGRPHDLGNISAYRGSPTGLQDYIGWLGANFDPSIAWKDLEWIREFWTGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGV 283          
The following BLAST results are available for this feature:
BLAST of EY735209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
LLDD_AGRVS3.652e-1830.19L-lactate dehydrogenase [cytochrome] OS=Agrobacter... [more]
LLDD_STRMK4.769e-1830.19L-lactate dehydrogenase [cytochrome] OS=Stenotroph... [more]
LLDD_STRM54.769e-1830.19L-lactate dehydrogenase [cytochrome] OS=Stenotroph... [more]
LLDD_PSEU24.769e-1829.25L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEAB4.769e-1830.19L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_XANAC6.229e-1829.72L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_KLEP76.229e-1830.66L-lactate dehydrogenase [cytochrome] OS=Klebsiella... [more]
LLDD_KLEP36.229e-1830.66L-lactate dehydrogenase [cytochrome] OS=Klebsiella... [more]
LLDD_CHRSD6.229e-1828.57L-lactate dehydrogenase [cytochrome] OS=Chromohalo... [more]
LLDD_XANC58.135e-1829.72L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-110-A06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735209 ID=EY735209; Name=EY735209; organism=Citrus sinensis; type=EST; length=894bp
TGCCAATCATGATTGCCCCATCAGCCATGCAGAAGATGGCTCATCCTGAA
GGGGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGATTATGAC
ATTGTCTTCGTGGTCTACTTCTAGCGTTGAAGAGGTTGCTTCAACAGGAC
CTGGCATCCGCTTTTTCCAGCTCTATGTGTACAAGGACAGGAATGTGGTT
GCTCAGCTTGTGAGAAGGGCTGAAAGAGCCGGATTCAAGGCCATTGCTCT
AACAGTTGATACCCCGAGGCTGGGTCGCAGAGAAGCTGACATCAAGAACA
GATTCACTCTACCACCATTTTTGACATTAAAGAATTTTCAGGGTTTGGAC
CTTGGCAAGATGGACGAGGCAAATGACTCTGGGCTTGCTGCCTATGTTGC
TGGTCAAATTGATCGTTCTCTGAGCTGGAAGGACGTGAAGTGGCTTCAAA
CAATCACCAAATTGCCAATTCTGGTGAAGGGTGTACTCACAGCAGAGGAT
GCGCGGATTGCAGTTCAAGCTGGAGCAGCTGGGATTATTGTATCCAATCA
TGGAGCTCGTCAACTTGACTATGTCCCTGCCCCTATCTTGGGCCCTGGAA
GAGGTTGTGAAAGCTACTCAGGGGCGTTTTCCTGTGTTCTTGGATGGGTG
GGTGTTAGGGGAAGAACTGGTTGTCTTCAAGCATTTGGCCTTGGGACCCT
CTGGGATATTTTATGGAACAACCAAGGGGGGGAACTCTTTGGCCCGCTGA
GGGAAAAAAAGGCCCTCAAAAAAAATCACCCAGAAAGCTTCGCGGAACAA
TTCTAAACCCTCCCACGGCGACTAAGCGCGCTCGACGGGCACCCGCACAC
CAAGTTACTCCTGGCCGGATACCACTCCCGGAGAAGTGGGAAGC
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