EY735209

Overview
NameEY735209
Unique NameEY735209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_SHISS (L-lactate dehydrogenase [cytochrome] OS=Shigella sonnei (strain Ss046) GN=lldD PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.367e-17
Identity = 70/255 (27.45%), Postives = 106/255 (41.57%), Query Frame = 3 
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPAPILGPGRGCESYSGAFS---CVLGWVGVRGRTGCLQAFGLG 695
            P+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G     +D G ++AY             +    D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD     +L   R   + + A      +L   G+R     ++   LG
Sbjct:   72 PVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD----GVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALG 322
[Close]
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_SHIFL (L-lactate dehydrogenase [cytochrome] OS=Shigella flexneri GN=lldD PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.367e-17
Identity = 70/255 (27.45%), Postives = 106/255 (41.57%), Query Frame = 3 
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPAPILGPGRGCESYSGAFS---CVLGWVGVRGRTGCLQAFGLG 695
            P+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G     +D G ++AY             +    D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD     +L   R   + + A      +L   G+R     ++   LG
Sbjct:   72 PVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD----GVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALG 322
[Close]
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_SHIF8 (L-lactate dehydrogenase [cytochrome] OS=Shigella flexneri serotype 5b (strain 8401) GN=lldD PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.367e-17
Identity = 70/255 (27.45%), Postives = 106/255 (41.57%), Query Frame = 3 
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPAPILGPGRGCESYSGAFS---CVLGWVGVRGRTGCLQAFGLG 695
            P+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G     +D G ++AY             +    D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD     +L   R   + + A      +L   G+R     ++   LG
Sbjct:   72 PVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD----GVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALG 322
[Close]
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_SHIDS (L-lactate dehydrogenase [cytochrome] OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=lldD PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.367e-17
Identity = 70/255 (27.45%), Postives = 106/255 (41.57%), Query Frame = 3 
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPAPILGPGRGCESYSGAFS---CVLGWVGVRGRTGCLQAFGLG 695
            P+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G     +D G ++AY             +    D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD     +L   R   + + A      +L   G+R     ++   LG
Sbjct:   72 PVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD----GVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALG 322
[Close]
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_SHIBS (L-lactate dehydrogenase [cytochrome] OS=Shigella boydii serotype 4 (strain Sb227) GN=lldD PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.367e-17
Identity = 70/255 (27.45%), Postives = 106/255 (41.57%), Query Frame = 3 
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPAPILGPGRGCESYSGAFS---CVLGWVGVRGRTGCLQAFGLG 695
            P+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G     +D G ++AY             +    D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD     +L   R   + + A      +L   G+R     ++   LG
Sbjct:   72 PVALAPVGLCGMYARRGEVQAAKAADTHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD----GVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALG 322
[Close]
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_SHIB3 (L-lactate dehydrogenase [cytochrome] OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=lldD PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.367e-17
Identity = 70/255 (27.45%), Postives = 106/255 (41.57%), Query Frame = 3 
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPAPILGPGRGCESYSGAFS---CVLGWVGVRGRTGCLQAFGLG 695
            P+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G     +D G ++AY             +    D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD     +L   R   + + A      +L   G+R     ++   LG
Sbjct:   72 PVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD----GVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALG 322
[Close]
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_ECOUT (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain UTI89 / UPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.367e-17
Identity = 70/255 (27.45%), Postives = 106/255 (41.57%), Query Frame = 3 
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPAPILGPGRGCESYSGAFS---CVLGWVGVRGRTGCLQAFGLG 695
            P+ + P  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G     +D G ++AY             +A   D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD     +L   R   + + A      +L   G+R     ++   LG
Sbjct:   72 PVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD----GVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALG 322
[Close]
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_ECOSM (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.367e-17
Identity = 70/255 (27.45%), Postives = 106/255 (41.57%), Query Frame = 3 
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPAPILGPGRGCESYSGAFS---CVLGWVGVRGRTGCLQAFGLG 695
            P+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G     +D G ++AY             +    D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD     +L   R   + + A      +L   G+R     ++   LG
Sbjct:   72 PVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD----GVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALG 322
[Close]
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_ECOSE (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain SE11) GN=lldD PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.367e-17
Identity = 70/255 (27.45%), Postives = 106/255 (41.57%), Query Frame = 3 
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPAPILGPGRGCESYSGAFS---CVLGWVGVRGRTGCLQAFGLG 695
            P+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G     +D G ++AY             +    D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD     +L   R   + + A      +L   G+R     ++   LG
Sbjct:   72 PVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD----GVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALG 322
[Close]
BLAST of EY735209 vs. ExPASy Swiss-Prot
Match: LLDD_ECOLU (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.367e-17
Identity = 70/255 (27.45%), Postives = 106/255 (41.57%), Query Frame = 3 
Query:    3 PIMIAPSAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPAPILGPGRGCESYSGAFS---CVLGWVGVRGRTGCLQAFGLG 695
            P+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G     +D G ++AY             +    D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD     +L   R   + + A      +L   G+R     ++   LG
Sbjct:   72 PVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD----GVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALG 322
The following BLAST results are available for this feature:
BLAST of EY735209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
LLDD_SHISS2.367e-1727.45L-lactate dehydrogenase [cytochrome] OS=Shigella s... [more]
LLDD_SHIFL2.367e-1727.45L-lactate dehydrogenase [cytochrome] OS=Shigella f... [more]
LLDD_SHIF82.367e-1727.45L-lactate dehydrogenase [cytochrome] OS=Shigella f... [more]
LLDD_SHIDS2.367e-1727.45L-lactate dehydrogenase [cytochrome] OS=Shigella d... [more]
LLDD_SHIBS2.367e-1727.45L-lactate dehydrogenase [cytochrome] OS=Shigella b... [more]
LLDD_SHIB32.367e-1727.45L-lactate dehydrogenase [cytochrome] OS=Shigella b... [more]
LLDD_ECOUT2.367e-1727.45L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOSM2.367e-1727.45L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOSE2.367e-1727.45L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOLU2.367e-1727.45L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-110-A06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735209 ID=EY735209; Name=EY735209; organism=Citrus sinensis; type=EST; length=894bp
TGCCAATCATGATTGCCCCATCAGCCATGCAGAAGATGGCTCATCCTGAA
GGGGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGATTATGAC
ATTGTCTTCGTGGTCTACTTCTAGCGTTGAAGAGGTTGCTTCAACAGGAC
CTGGCATCCGCTTTTTCCAGCTCTATGTGTACAAGGACAGGAATGTGGTT
GCTCAGCTTGTGAGAAGGGCTGAAAGAGCCGGATTCAAGGCCATTGCTCT
AACAGTTGATACCCCGAGGCTGGGTCGCAGAGAAGCTGACATCAAGAACA
GATTCACTCTACCACCATTTTTGACATTAAAGAATTTTCAGGGTTTGGAC
CTTGGCAAGATGGACGAGGCAAATGACTCTGGGCTTGCTGCCTATGTTGC
TGGTCAAATTGATCGTTCTCTGAGCTGGAAGGACGTGAAGTGGCTTCAAA
CAATCACCAAATTGCCAATTCTGGTGAAGGGTGTACTCACAGCAGAGGAT
GCGCGGATTGCAGTTCAAGCTGGAGCAGCTGGGATTATTGTATCCAATCA
TGGAGCTCGTCAACTTGACTATGTCCCTGCCCCTATCTTGGGCCCTGGAA
GAGGTTGTGAAAGCTACTCAGGGGCGTTTTCCTGTGTTCTTGGATGGGTG
GGTGTTAGGGGAAGAACTGGTTGTCTTCAAGCATTTGGCCTTGGGACCCT
CTGGGATATTTTATGGAACAACCAAGGGGGGGAACTCTTTGGCCCGCTGA
GGGAAAAAAAGGCCCTCAAAAAAAATCACCCAGAAAGCTTCGCGGAACAA
TTCTAAACCCTCCCACGGCGACTAAGCGCGCTCGACGGGCACCCGCACAC
CAAGTTACTCCTGGCCGGATACCACTCCCGGAGAAGTGGGAAGC
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