EY735206

Overview
NameEY735206
Unique NameEY735206
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12280 contig Csv1_Contig12280:1..804. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY735206 vs. ExPASy Swiss-Prot
Match: GGPP6_ARATH (Geranylgeranyl pyrophosphate synthetase 6, mitochondrial OS=Arabidopsis thaliana GN=GGPP6 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 3.507e-30
Identity = 68/136 (50.00%), Postives = 93/136 (68.38%), Query Frame = 2
Query:  275 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLSVIAEIARAVGSTGMAAGQFLDLEG 682
            +++++MRY++L  G KR  P++C+ ACEL G     A P ACA+EM+HAASLI DDLPCMDDD  RRG+P+NH V+G   +ILA +AL  L  +  ++ T   +  E RVL  + E+ARAVG+ G+ AGQ  DL G
Sbjct:   66 EVHKAMRYTLLPGG-KRVRPMLCLVACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTSILASNALRSLAVKQTLASTSLGVTSE-RVLRAVQEMARAVGTEGLVAGQAADLAG 199          
BLAST of EY735206 vs. ExPASy Swiss-Prot
Match: ISPA_BACSU (Geranyltranstransferase OS=Bacillus subtilis GN=ispA PE=3 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.073e-26
Identity = 64/161 (39.75%), Postives = 93/161 (57.76%), Query Frame = 2
Query:  212 TTLITEIDQNLEKAITV-----KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLSVIAEIARAVGSTGMAAGQFLDLE 679
            T+ + +  + +E  ++V       P+ + +SM YS+ A G KR  P++ +A    +G +     P  CA+EM+H  SLIHDDLPCMDDD  RRG+P+NH V+G   A+LAGD L    F+ I SH    +  E R L ++ E+  A G+ GM  GQ  D+E
Sbjct:    6 TSFLADRKKTIENQLSVYTEKLDMPDSLKKSMLYSLQAGG-KRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKR-LRLVNELISAAGTEGMVGGQVADME 164          
BLAST of EY735206 vs. ExPASy Swiss-Prot
Match: ISPA_BACST (Geranyltranstransferase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.525e-25
Identity = 72/184 (39.13%), Postives = 105/184 (57.07%), Query Frame = 2
Query:  221 ITEIDQNLEKAIT-----VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLSVIAEIARAVGSTGMAAGQFLDLEG-GTHL----VEFCQKKKFGEMNECS 742
            + E  Q +E A++     ++ P ++ ++M YS+ A G KR  P++ ++     G +     P ACA+EM+H  SLIHDDLP MD+D  RRG+P+NH V+G  +AILAGD L    FQ I       + P  R L +I  +A+A G  GM AGQ  D+EG G  L    +E+  + K G+M + S
Sbjct:   10 LNEQKQAVETALSRYIERLEGPAKLKKAMAYSLEAGG-KRIRPLLLLSTVRALGKDPAVGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQLITEIDDERIPPSVR-LRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSELEYIHRHKTGKMLQYS 191          
BLAST of EY735206 vs. ExPASy Swiss-Prot
Match: ISPA_AQUAE (Geranyltranstransferase OS=Aquifex aeolicus GN=ispA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.291e-24
Identity = 68/192 (35.42%), Postives = 100/192 (52.08%), Query Frame = 2
Query:  227 EIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLSVIAEIARAVGSTGMAAGQFLDLEGGTHLVEFCQKKKFGEMNECSTGGWGVSWLGQKKKKNQNFG 802
            +I++ L + +  + PE++ E+M+Y  L KG KR  P+  VA     G N   A      +E++H  SLIHDDLPCMD+D  RRG P+ H  +G  +A+LAGDAL    F+ +        +    +L +   IA+  GS GM  GQ LD++G   L E   KK       C   G  V+   +K K+ ++ G
Sbjct:   10 KIEKRLNEILKPEGPEELIEAMKYYPLQKG-KRIRPLFTVAVASALGGNEDDAITVGSGIELIHNYSLIHDDLPCMDNDVWRRGLPTCHIKFGEAMALLAGDALLTYTFEVLSQRENYKTLSCEEILEINKIIAQKAGSNGMVGGQVLDIKGYEDLYEVSVKKTGALFEACFMCGAVVAKRREKLKEMESIG 200          
BLAST of EY735206 vs. ExPASy Swiss-Prot
Match: ISPA_ECOLI (Geranyltranstransferase OS=Escherichia coli (strain K12) GN=ispA PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.887e-21
Identity = 62/140 (44.29%), Postives = 80/140 (57.14%), Query Frame = 2
Query:  278 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLSVIAEIARAVGSTGMAAGQFLDLEG-GTHL 694
            + E+M+Y  L  G KR  P +  A   +FGV+       A A+E +HA SLIHDDLP MDDD  RRG P+ H  +G   AILAGDAL  L F  +     P +    R+ S+I+E+A A G  GM  GQ LDL+  G H+
Sbjct:   32 VVETMQYGALLGG-KRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRI-SMISELASASGIAGMCGGQALDLDAEGKHV 169          
BLAST of EY735206 vs. ExPASy Swiss-Prot
Match: ISPA_BUCAP (Geranyltranstransferase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ispA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.076e-21
Identity = 61/134 (45.52%), Postives = 85/134 (63.43%), Query Frame = 2
Query:  278 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLSVIAEIARAVGSTGMAAGQFLDLE 679
            ++ +M+YS L+ G KR    +  A  E F VN  A    + A+E+VH+ SLIHDDLPC+D+D  RRG+ S H  YG + A+LAGDAL  L F +I+S++    V +   L +IAE + A+G +GM  GQ LDLE
Sbjct:   32 LFRAMKYSTLSGG-KRLRACLIYATGETFQVNIAALDVISAAVELVHSYSLIHDDLPCIDNDYFRRGKISCHIKYGENFALLAGDALQGLAF-NILSNSNMPGVHDSIRLKMIAEFSNAIGYSGMCIGQMLDLE 163          
BLAST of EY735206 vs. ExPASy Swiss-Prot
Match: ISPA_BUCAI (Geranyltranstransferase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ispA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.133e-19
Identity = 55/134 (41.04%), Postives = 86/134 (64.18%), Query Frame = 2
Query:  278 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLSVIAEIARAVGSTGMAAGQFLDLE 679
            + ++M+YSV + G+KR    +  +  ++F VN       + A+E +H+ SLIHDDLPCMD+D  RRG+ S H  YG   ++LAGDAL  L F +I+S++    V   + + +I+E++ ++GS+GM  GQ LDLE
Sbjct:   32 LLKAMKYSVFS-GSKRLRSSLIYSTGDVFKVNITTLDVISTAIEFIHSYSLIHDDLPCMDNDNFRRGKISCHVKYGESTSLLAGDALQSLAF-NILSNSFMPNVSNLKRIKMISELSYSIGSSGMCMGQNLDLE 163          
BLAST of EY735206 vs. ExPASy Swiss-Prot
Match: CRTE_PANAN (Geranylgeranyl pyrophosphate synthetase OS=Pantoea ananas GN=crtE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.751e-19
Identity = 60/158 (37.97%), Postives = 88/158 (55.70%), Query Frame = 2
Query:  218 LITEIDQNLEKAITVKYPEQIY-ESMRYSVLAKGTKRAPPVMCVAACEL-FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLSVIAEIARAVGSTGMAAGQFLDLEGG 685
            L+ +ID+ L++ + V+    +   +MR   LA G +  P ++ + A +L   V+       ACA+EMVHAASLI DD+PCMDD   RRG+P+ H+ YG  +AILA  AL    F  I        + + R +S   E++ A+G  G+  GQF DL  G
Sbjct:   19 LLADIDRRLDQLLPVEGERDVVGAAMREGALAPGKRIRPMLLLLTARDLGCAVSHDGLLDLACAVEMVHAASLILDDMPCMDDAKLRRGRPTIHSHYGEHVAILAAVALLSKAFGVIADADGLTPLAKNRAVS---ELSNAIGMQGLVQGQFKDLSEG 173          
BLAST of EY735206 vs. ExPASy Swiss-Prot
Match: ISPA_MICLU (Geranyltranstransferase OS=Micrococcus luteus GN=fps PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.205e-19
Identity = 61/148 (41.22%), Postives = 85/148 (57.43%), Query Frame = 2
Query:  245 EKAITVKYPEQ--IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLSVIAEIARAVGSTGMAAGQFLDLEG 682
            E  +   +P Q  ++E++ YS L+ G KR  P++ +   +  G N     P   ALEM+H  SLIHDDLP MD+D  RRG+ +NH  +    AILAGDAL    FQ I++     L  E + LS+I  ++ A GS GM  GQ LD++G
Sbjct:   18 ESLLNKYHPAQSRLHEAINYS-LSAGGKRIRPLLVLTTLDSLGGNAHDGLPFGIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKRFDEATAILAGDALLTDAFQCILN---TQLNAEIK-LSLINLLSTASGSNGMVYGQMLDMQG 160          
BLAST of EY735206 vs. ExPASy Swiss-Prot
Match: ISPA_HAEIN (Geranyltranstransferase OS=Haemophilus influenzae GN=ispA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.861e-18
Identity = 55/133 (41.35%), Postives = 77/133 (57.89%), Query Frame = 2
Query:  278 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLSVIAEIARAVGSTGMAAGQFLDL 676
            + E+M+Y++L  G KR  P +  A  ++ G  +      A A+E +HA SLIHDDLP MDDD  RRG P+ H  +    AILAGDAL    F+ I++ TP   +   + L++I  +A+  G  GM  GQ LDL
Sbjct:   33 LLEAMKYALLLGG-KRVRPFLVYATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE-ILTKTPN--ISTEQKLALIQILAQGAGVQGMCLGQSLDL 161          
The following BLAST results are available for this feature:
BLAST of EY735206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
GGPP6_ARATH3.507e-3050.00Geranylgeranyl pyrophosphate synthetase 6, mitocho... [more]
ISPA_BACSU3.073e-2639.75Geranyltranstransferase OS=Bacillus subtilis GN=is... [more]
ISPA_BACST1.525e-2539.13Geranyltranstransferase OS=Bacillus stearothermoph... [more]
ISPA_AQUAE1.291e-2435.42Geranyltranstransferase OS=Aquifex aeolicus GN=isp... [more]
ISPA_ECOLI3.887e-2144.29Geranyltranstransferase OS=Escherichia coli (strai... [more]
ISPA_BUCAP5.076e-2145.52Geranyltranstransferase OS=Buchnera aphidicola sub... [more]
ISPA_BUCAI2.133e-1941.04Geranyltranstransferase OS=Buchnera aphidicola sub... [more]
CRTE_PANAN4.751e-1937.97Geranylgeranyl pyrophosphate synthetase OS=Pantoea... [more]
ISPA_MICLU6.205e-1941.22Geranyltranstransferase OS=Micrococcus luteus GN=f... [more]
ISPA_HAEIN6.861e-1841.35Geranyltranstransferase OS=Haemophilus influenzae ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-102-H10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735206 ID=EY735206; Name=EY735206; organism=Citrus sinensis; type=EST; length=804bp
CCGGAACAATCACAAACGCTTCAATTCAACCTGTACTCCAAAACACCAAA
GAAACAATTTTTTTTAAAAAAAAATGATTTTTTCATCAGCATTATTAGCA
AACCCGCCATGTGTTTGCCTTCCAAGAAAATTCCCCGTTCGTTGTTCGTC
TTTACCAGTCTCTGCTGCAAGCCAGTTGAGATCCACCCAGTTTGATTTGA
AGACTTACTGGACTACCCTTATTACTGAAATTGATCAGAATTTGGAAAAA
GCAATCACAGTTAAGTACCCAGAGCAGATCTATGAATCCATGAGATATTC
GGTGTTAGCCAAGGGAACTAAGCGGGCGCCGCCTGTCATGTGTGTGGCAG
CTTGCGAGCTCTTTGGTGTTAATCGGATTGCAGCTTTTCCCACAGCTTGC
GCTCTTGAAATGGTCCATGCTGCTTCATTGATTCATGACGATCTTCCTTG
CATGGATGATGACCCATCTCGCCGAGGTCAGCCCTCAAACCACACAGTCT
ATGGTGTTGACATAGCTATCCTTGCAGGGGATGCACTCTTCCCCCTTGGT
TTCCAACACATTGTGTCCCACACACCCCCCCATCTCGTGCCTGAGCCCCG
TGTCCTTTCGGTGATTGCTGAGATTGCCCGTGCTGTGGGGTCCACTGGCA
TGGCTGCCGGGCAGTTCCTTGATCTTGAAGGTGGAACCCACTTGGTTGAA
TTTTGCCAGAAAAAAAAATTCGGTGAAATGAATGAGTGCTCCACGGGGGG
GTGGGGGGTTTCTTGGTTGGGGCAAAAGAAGAAGAAAAACCAAAACTTTG
GGGA
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