EY735204

Overview
NameEY735204
Unique NameEY735204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_SILPO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Silicibacter pomeroyi GN=clpX PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.515e-32
Identity = 89/200 (44.50%), Postives = 121/200 (60.50%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRAN--MRTGGLTDALVTSSLL------ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAF 573
            A++++   AQRGIVYIDE  KI  K+E+P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DT +ILFICGGAF GL+K I++R + S++GFGA VRA+     G L   L    LL      E  GR                       ++ L+ED LV +LT P NAL KQY+++F + + +  F
Sbjct:  170 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVP--PQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRASDERGVGELFTELEPEDLLKFGLIPEFVGR-----------------LPVLATLEDLDEDALVTILTKPKNALVKQYQRLFELEDTELDF 350          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_MARMM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Maricaulis maris (strain MCS10) GN=clpX PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.515e-32
Identity = 92/200 (46.00%), Postives = 119/200 (59.50%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLL------ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAF 573
            AAD++   AQRGIVYIDE  KI  K+++P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DT +ILF+ GGAF GL+K IS+R Q SSIGFGA VR     RTG +   +    LL      E  GR                       ++ L+   LVQ+LT+P NAL KQY+++F M  V   F
Sbjct:  169 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP--PQGGRKHPQQEFLQVDTTNILFVVGGAFAGLDKVISQRGQGSSIGFGADVREPDARRTGEILREVEPDDLLRFGLIPEFVGR-----------------LPVIATLEDLDIGALVQILTEPKNALVKQYQRLFEMEGVGLTF 349          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_DINSH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Dinoroseobacter shibae (strain DFL 12) GN=clpX PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.515e-32
Identity = 88/200 (44.00%), Postives = 118/200 (59.00%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTG--------GLTDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAF 573
            A++++   AQRGIVYIDE  KI  K+++P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DT +ILFICGGAF GLEK I++R + S+IGFGA V+ N   G           D L    + E  GR                       +  L+ED LV +LT P NAL KQY+++F + + Q  F
Sbjct:  165 ASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP--PQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSAIGFGADVKENDTRGVGEMFGELEPEDLLKFGLIPEFVGR-----------------LPVIATLTDLDEDALVTILTQPKNALVKQYQRLFELEDAQLTF 345          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_DECAR (ATP-dependent Clp protease ATP-binding subunit clpX OS=Dechloromonas aromatica (strain RCB) GN=clpX PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.515e-32
Identity = 91/221 (41.18%), Postives = 125/221 (56.56%), Query Frame = 1
Query:    7 DFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            D+D   AQ+GIVYIDE  KI  K+++P+  RDVSGEGVQQALLK++EGT  +  IP  G RKHP  D + +DT +ILFICGGAF GLEK I  R +   IGFGA V++           V   LL++         + P              +Q L E  LVQ+LT+P NAL KQY+K+F+M +V+       L+   +K   +K    G ++ ++  +L
Sbjct:  168 DYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTAS--IPPQGGRKHPNQDFVQVDTTNILFICGGAFAGLEKVIQSRSERGGIGFGAEVKSKD-----DGKAVGKILLDAEPEDLIKFGLIPEL---IGRLPVVATLQELEESALVQILTEPKNALVKQYQKLFSMEDVELEIRPTALSAIAKKALARKTGARGLRSILEHALL 378          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_CLONN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium novyi (strain NT) GN=clpX PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.515e-32
Identity = 96/229 (41.92%), Postives = 128/229 (55.90%), Query Frame = 1
Query:    4 ADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMR--TGGLTDALVTSSLL------ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTI 663
            AD+D   A+RGI+YIDE  KI  K+E+P+  RDVSGEGVQQALLK+LEGTV +VP    G RKHP  + I I+T +ILFICGGAF GL+K I +R + SS+GFG+ V++      G L    V   LL      E  GR                       +Q L+   LV++L +P NAL KQYKK+  M NV+  F    L     +   +K    G ++ I++T+
Sbjct:  165 ADYDIEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVP--PQGGRKHPHQEFIQINTSNILFICGGAFDGLDKIIEKRTRKSSLGFGSTVQSKEEKDIGELLKESVPEDLLKFGLIPEFIGR-----------------LPIMVTLQSLDNSALVRILKEPKNALVKQYKKLLLMDNVELEFEDEALKAIADEAIERKTGARGLRSIIEETM 374          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_SILST (ATP-dependent Clp protease ATP-binding subunit clpX OS=Silicibacter sp. (strain TM1040) GN=clpX PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.591e-32
Identity = 92/231 (39.83%), Postives = 132/231 (57.14%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTG-GLT-------DALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            A++++   AQRGIVYIDE  KI  K+E+P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DT +ILFICGGAF GL+K I +R + S++GFGA VR     G G T       D L    + E  GR                       ++ L+ED L+ +LT P NAL KQY+++F + + +  F    L+   +K   +K    G ++ ++  +L
Sbjct:  168 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVP--PQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVREESDAGVGETFRDLEPEDLLKFGLIPEFVGR-----------------LPVLATLEDLDEDALITILTKPKNALVKQYQRLFELEDTELDFTDEALSAIAKKAIERKTGARGLRSILEDILL 379          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_DESAH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=clpX PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.591e-32
Identity = 91/230 (39.57%), Postives = 126/230 (54.78%), Query Frame = 1
Query:    4 ADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPV--RANMRTGGLTDALVTSSLL------ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            AD+D   AQRGI+YIDE  KI  + ++P+  RDVSGEGVQQALLK++EGT  +  IP  G RKHP+ D + ++T +ILF+CGG F GLEK I  R    S+GFGA V  R     G L + L    L+      E  GR                       +  LNE  LV++LT+P NAL KQY+++F   NV+  F    LA   ++   ++    G +  +++T+L
Sbjct:  169 ADYDIEKAQRGIIYIDEVDKISQRGDNPSITRDVSGEGVQQALLKIIEGTTAS--IPPKGGRKHPQQDFVKVETSNILFVCGGTFTGLEKVIERRISQKSMGFGAEVQSRKEKNVGELLEQLKPEDLIKFGLIPEFLGR-----------------LPVVTSLSELNEASLVKILTEPKNALLKQYQRLFEFENVKLTFTEEALAAMAKEAVTRRSGARGLRAIMEETML 379          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_SYNPX (ATP-dependent Clp protease ATP-binding subunit clpX OS=Synechococcus sp. (strain WH8102) GN=clpX PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.996e-32
Identity = 91/222 (40.99%), Postives = 124/222 (55.86%), Query Frame = 1
Query:    4 ADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            AD D   AQRGI+YIDE  KI  K+E+P+  RDVSGEGVQQALLKMLEGTV NVP    G RKHP  D I IDT  ILFICGGAFVGL++ + +R   ++IGF  P     R+    +   T  L            + P           + +++PL+E  L  +LT+P +AL KQ++ + +M NVQ  F    +    Q+ H +K      +  +++ +L
Sbjct:  192 ADMDVDQAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVP--PQGGRKHPYQDCIQIDTSQILFICGGAFVGLDEVVQKRMGRNAIGF-MPTDGRGRSRANRELQTTQVLRHLEPDDLVKYGLIPE---FIGRMPVSAVLEPLDESALESILTEPRDALVKQFRTLLSMDNVQLQFEPAAIHAIAQEAHRRKTGARALRGIVEELML 407          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_PSEMY (ATP-dependent Clp protease ATP-binding subunit clpX OS=Pseudomonas mendocina (strain ymp) GN=clpX PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.996e-32
Identity = 95/230 (41.30%), Postives = 125/230 (54.35%), Query Frame = 1
Query:    7 DFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL--------TDALVTSSLL-ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            D+D   AQ GIVYIDE  KI  K+++P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DT++ILFICGGAF GLEK I  R     IGFGA VR+      +         D LV   L+ E  GR                       ++ L+E  LVQ+LT+P NAL KQY K+F M  V   F    L    Q+   +K    G ++ ++  +L
Sbjct:  171 DYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP--PQGGRKHPQQEFLQVDTRNILFICGGAFAGLEKVIQARSTKGGIGFGAEVRSKQEGKKIGESLREVEPDDLVKFGLIPEFVGR-----------------LPVIATLEELDEAALVQILTEPKNALTKQYAKLFEMEGVDLEFRSDALKSVAQRALERKTGARGLRSILEGILL 381          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_PROMT (ATP-dependent Clp protease ATP-binding subunit clpX OS=Prochlorococcus marinus (strain NATL2A) GN=clpX PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.996e-32
Identity = 92/204 (45.10%), Postives = 117/204 (57.35%), Query Frame = 1
Query:    4 ADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGF------------GAPVRANMRTGGLTDALVTSSLL-ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAF 573
            AD D   AQRGI+YIDE  KI  K+E+P+  RDVSGEGVQQALLKMLEGTV NVP    G RKHP GD+I IDT  ILFICGGAFVGL+  + +R   +SIGF               V A++      D LV   L+ E  GR                    + +++PLN   L  +LT+P +AL KQ++ + +M NV+ +F
Sbjct:  191 ADMDVDLAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVP--PQGGRKHPYGDSIQIDTSQILFICGGAFVGLDDVVEKRLGKNSIGFIQNENRTRTKSNRDRVGADLINDLEPDDLVKYGLIPEFIGR-----------------MPVSAILEPLNAKALESILTEPRDALVKQFRTLLSMDNVELSF 375          
The following BLAST results are available for this feature:
BLAST of EY735204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPX_SILPO3.515e-3244.50ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_MARMM3.515e-3246.00ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_DINSH3.515e-3244.00ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_DECAR3.515e-3241.18ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_CLONN3.515e-3241.92ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_SILST4.591e-3239.83ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_DESAH4.591e-3239.57ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_SYNPX5.996e-3240.99ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_PSEMY5.996e-3241.30ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_PROMT5.996e-3245.10ATP-dependent Clp protease ATP-binding subunit clp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-102-H01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735204 ID=EY735204; Name=EY735204; organism=Citrus sinensis; type=EST; length=770bp
GCTGCTGATTTCGACCCCTTTTCAGCTCAGAGAGGGATCGTCTACATTGA
TGAAGCTTATAAGATAGTGAAGGCTGAGAGTCCAAACAATGGCAGAGATG
TATCGGGCGAGGGAGTCCAACAGGCATTACTGAAAATGCTAGAAGGAACT
GTAGTAAATGTTCCTATACCTGATAACGGACCTCGGAAGCATCCTCGTGG
TGATAACATTCCAATTGATACGAAAGATATCCTTTTCATATGTGGTGGTG
CCTTTGTTGGTTTGGAGAAGACAATTTCAGAGAGACGGCAAGATTCTTCT
ATTGGCTTTGGAGCACCAGTCCGTGCCAACATGAGAACTGGTGGATTGAC
TGATGCGCTTGTGACGTCATCATTGTTGGAATCATCAGGTAGATAGTGGT
GATCTTGTAACATATGGCCTCATTCCTGAATTCATTGGACGGATTCCGAT
TTTAATGAGCTTGTCCAGCCTTTAAATGAGGATCAACTTGTTCAGGTTCT
CACGGATCCCATAAATGCTCTTGGAAAACAGTACAAAAAGATGTTCACCA
TGATTAATGTCCAAACTGCCTTTTACTGATGATGCCTTGCGATTGGTTGC
CAAAAAAAGCATGGCAAAAAACACTGGGGCTCCGGGGCCAAGAACCCTAT
TAAAAAAACAATCCTCACAAAACGCGCATGGTTGAAAATTCCCGCAAAAC
CAAACATGGCACTTCTAGCTCGTAATATGCCTATTTGGTACAAATAAGGA
GGCGCTTATGGCTCATATTG
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