EY735204

Overview
NameEY735204
Unique NameEY735204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_BEII9 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=clpX PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.864e-33
Identity = 95/231 (41.13%), Postives = 135/231 (58.44%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGL------TDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            A+D++   AQRGIVYIDE  KI  K+++P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DT +ILFICGGAF GLEK IS R + +SIGF A V+A  + RTG +       D L    + E  GR                       ++ L+E+ L ++LT+P NAL KQY+++F M N +  F    L +  +K   +K    G ++ ++  +L
Sbjct:  167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP--PQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIISTRGKTTSIGFAASVQAPDDRRTGEIFRKVEPEDLLKFGLIPEFVGR-----------------LPVIATLEDLDEEALKKILTEPKNALVKQYQRLFEMENTELTFQDEALNVVAKKAIERKTGARGLRSIMESILL 378          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_ACIBY (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain AYE) GN=clpX PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.864e-33
Identity = 89/200 (44.50%), Postives = 117/200 (58.50%), Query Frame = 1
Query:    4 ADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL---------TDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAF 573
            AD+D   AQ+GI+YIDE  KI  K+E+P+  RDVSGEGVQQALLKM+EGTV +  IP  G RKHP+ + I IDT +ILFICGGAF GLEK + +R++   IGF A V+    T  L         TD +    + E  GR                       ++ L+E+ L+Q+LT+P NAL +QY+ +F M NV   F
Sbjct:  168 ADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAELFRQVEPTDLVKFGLIPEFIGR-----------------LPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVF 348          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_ACIBT (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=clpX PE=3 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.864e-33
Identity = 89/200 (44.50%), Postives = 117/200 (58.50%), Query Frame = 1
Query:    4 ADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL---------TDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAF 573
            AD+D   AQ+GI+YIDE  KI  K+E+P+  RDVSGEGVQQALLKM+EGTV +  IP  G RKHP+ + I IDT +ILFICGGAF GLEK + +R++   IGF A V+    T  L         TD +    + E  GR                       ++ L+E+ L+Q+LT+P NAL +QY+ +F M NV   F
Sbjct:  168 ADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAELFRQVEPTDLVKFGLIPEFIGR-----------------LPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVF 348          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_ACIBS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain SDF) GN=clpX PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.864e-33
Identity = 89/200 (44.50%), Postives = 117/200 (58.50%), Query Frame = 1
Query:    4 ADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL---------TDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAF 573
            AD+D   AQ+GI+YIDE  KI  K+E+P+  RDVSGEGVQQALLKM+EGTV +  IP  G RKHP+ + I IDT +ILFICGGAF GLEK + +R++   IGF A V+    T  L         TD +    + E  GR                       ++ L+E+ L+Q+LT+P NAL +QY+ +F M NV   F
Sbjct:  168 ADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAELFRQVEPTDLVKFGLIPEFIGR-----------------LPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVF 348          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_ACIBC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain ACICU) GN=clpX PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.864e-33
Identity = 89/200 (44.50%), Postives = 117/200 (58.50%), Query Frame = 1
Query:    4 ADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL---------TDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAF 573
            AD+D   AQ+GI+YIDE  KI  K+E+P+  RDVSGEGVQQALLKM+EGTV +  IP  G RKHP+ + I IDT +ILFICGGAF GLEK + +R++   IGF A V+    T  L         TD +    + E  GR                       ++ L+E+ L+Q+LT+P NAL +QY+ +F M NV   F
Sbjct:  168 ADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAELFRQVEPTDLVKFGLIPEFIGR-----------------LPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVF 348          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_ACIB5 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain AB0057) GN=clpX PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.864e-33
Identity = 89/200 (44.50%), Postives = 117/200 (58.50%), Query Frame = 1
Query:    4 ADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL---------TDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAF 573
            AD+D   AQ+GI+YIDE  KI  K+E+P+  RDVSGEGVQQALLKM+EGTV +  IP  G RKHP+ + I IDT +ILFICGGAF GLEK + +R++   IGF A V+    T  L         TD +    + E  GR                       ++ L+E+ L+Q+LT+P NAL +QY+ +F M NV   F
Sbjct:  168 ADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAELFRQVEPTDLVKFGLIPEFIGR-----------------LPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVF 348          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_ACIB3 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain AB307-0294) GN=clpX PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.864e-33
Identity = 89/200 (44.50%), Postives = 117/200 (58.50%), Query Frame = 1
Query:    4 ADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL---------TDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAF 573
            AD+D   AQ+GI+YIDE  KI  K+E+P+  RDVSGEGVQQALLKM+EGTV +  IP  G RKHP+ + I IDT +ILFICGGAF GLEK + +R++   IGF A V+    T  L         TD +    + E  GR                       ++ L+E+ L+Q+LT+P NAL +QY+ +F M NV   F
Sbjct:  168 ADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAELFRQVEPTDLVKFGLIPEFIGR-----------------LPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVF 348          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_ACIAD (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter sp. (strain ADP1) GN=clpX PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.864e-33
Identity = 97/251 (38.65%), Postives = 137/251 (54.58%), Query Frame = 1
Query:    4 ADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL---------TDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTILTKRAWLKIPAKPNMALLARN 726
            AD+D   AQ+GI+YIDE  KI  K+E+P+  RDVSGEGVQQALLKM+EGTV +  IP  G RKHP+ + I IDT +ILFICGGAF GLEK + +R +   IGF A V+    T  L         TD +    + E  GR                       ++ L+E  L+Q+LT+P NAL +QY+ +F M NV   F    L     KK  +++ G+     I + +L +  +  +P++ ++  +  N
Sbjct:  169 ADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVAS--IPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRHEKGGIGFNAEVKKKDETKKLAELFRQVEPTDLVKFGLIPEFIGR-----------------LPVIATLEELDEAALMQILTEPKNALTRQYQSLFQMENVDLVFEESALR-AIAKKALERNTGARGLRSIMENVLLETMY-DLPSRKDIGTVVVN 398          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_RHOPB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhodopseudomonas palustris (strain BisB18) GN=clpX PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.180e-33
Identity = 96/231 (41.56%), Postives = 133/231 (57.58%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGL------TDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            +AD++   AQRGIVYIDE  KI  K+++P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DT +ILFICGGAF GLEK IS R + +SIGF A V A  + RTG +       D L    + E  GR                       ++ L+E  L ++LTDP NAL KQY+++F M N++  F    L    +K   +K    G ++ ++  +L
Sbjct:  167 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP--PQGGRKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTGEIFRHVEPEDLLKYGLIPEFVGR-----------------LPVVATLEDLDEASLKKILTDPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARGLRSILESILL 378          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_RHOP5 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhodopseudomonas palustris (strain BisA53) GN=clpX PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.180e-33
Identity = 96/231 (41.56%), Postives = 133/231 (57.58%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGL------TDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            +AD++   AQRGIVYIDE  KI  K+++P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DT +ILFICGGAF GLEK IS R + +SIGF A V A  + RTG +       D L    + E  GR                       ++ L+E  L ++LTDP NAL KQY+++F M N++  F    L    +K   +K    G ++ ++  +L
Sbjct:  167 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP--PQGGRKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTGEIFRHVEPEDLLKYGLIPEFVGR-----------------LPVVATLEDLDEASLKKILTDPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARGLRSILESILL 378          
The following BLAST results are available for this feature:
BLAST of EY735204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPX_BEII91.864e-3341.13ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_ACIBY1.864e-3344.50ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_ACIBT1.864e-3344.50ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_ACIBS1.864e-3344.50ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_ACIBC1.864e-3344.50ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_ACIB51.864e-3344.50ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_ACIB31.864e-3344.50ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_ACIAD1.864e-3338.65ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_RHOPB3.180e-3341.56ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_RHOP53.180e-3341.56ATP-dependent Clp protease ATP-binding subunit clp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-102-H01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735204 ID=EY735204; Name=EY735204; organism=Citrus sinensis; type=EST; length=770bp
GCTGCTGATTTCGACCCCTTTTCAGCTCAGAGAGGGATCGTCTACATTGA
TGAAGCTTATAAGATAGTGAAGGCTGAGAGTCCAAACAATGGCAGAGATG
TATCGGGCGAGGGAGTCCAACAGGCATTACTGAAAATGCTAGAAGGAACT
GTAGTAAATGTTCCTATACCTGATAACGGACCTCGGAAGCATCCTCGTGG
TGATAACATTCCAATTGATACGAAAGATATCCTTTTCATATGTGGTGGTG
CCTTTGTTGGTTTGGAGAAGACAATTTCAGAGAGACGGCAAGATTCTTCT
ATTGGCTTTGGAGCACCAGTCCGTGCCAACATGAGAACTGGTGGATTGAC
TGATGCGCTTGTGACGTCATCATTGTTGGAATCATCAGGTAGATAGTGGT
GATCTTGTAACATATGGCCTCATTCCTGAATTCATTGGACGGATTCCGAT
TTTAATGAGCTTGTCCAGCCTTTAAATGAGGATCAACTTGTTCAGGTTCT
CACGGATCCCATAAATGCTCTTGGAAAACAGTACAAAAAGATGTTCACCA
TGATTAATGTCCAAACTGCCTTTTACTGATGATGCCTTGCGATTGGTTGC
CAAAAAAAGCATGGCAAAAAACACTGGGGCTCCGGGGCCAAGAACCCTAT
TAAAAAAACAATCCTCACAAAACGCGCATGGTTGAAAATTCCCGCAAAAC
CAAACATGGCACTTCTAGCTCGTAATATGCCTATTTGGTACAAATAAGGA
GGCGCTTATGGCTCATATTG
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