EY735204

Overview
NameEY735204
Unique NameEY735204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_BART1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=clpX PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.424e-33
Identity = 94/231 (40.69%), Postives = 133/231 (57.58%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRAN--------MRTGGLTDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            AAD++   AQRGIVYIDE  KI  KA++P+  RDVSGEGVQQALLK++EGT+ +VP    G RKHP+ + + +DT +ILFICGGAF GLE+ IS R + +SIGF A V+A          R     D +    + E  GR                       ++ L+ + L+Q+L+ P NAL KQY+++F M NV+ AF+   L    +K   +K    G ++ ++K +L
Sbjct:  169 AADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVP--PQGGRKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKAPDERCVGEIFRDLEPEDLIKFGLIPEFIGR-----------------LPIVATLEDLDVNALMQILSQPKNALVKQYQRLFEMENVELAFHEDALRAIAKKAIERKTGARGLRSIMEKILL 380          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_OLICO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=clpX PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.083e-33
Identity = 96/231 (41.56%), Postives = 132/231 (57.14%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGL------TDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            AAD++   AQRGIVYIDE  KI  K+++P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DT +ILFICGGAF GLEK IS R + +SIGF A V A  + RTG +       D L    + E  GR                       ++ L+E  L ++L +P NAL KQY+++F M NV+  F    L    +K   +K    G ++ ++  +L
Sbjct:  167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP--PQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIISSRGRTTSIGFAASVLAPEDRRTGEIFREVEPEDLLKYGLIPEFVGR-----------------LPVVATLEDLDEASLKKILVEPKNALVKQYQRLFEMENVELTFADEALGAVARKAIERKTGARGLRSILESILL 378          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_CYAA5 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Cyanothece sp. (strain ATCC 51142) GN=clpX PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.083e-33
Identity = 95/200 (47.50%), Postives = 113/200 (56.50%), Query Frame = 1
Query:    4 ADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVR--------ANMRTGGLTDALVTSSLL-ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAF 573
            AD D   AQRGI+YIDE  KI  K+E+P+  RDVSGEGVQQALLKMLEGTV NVP    G RKHP  D I IDT +ILFICGGAFVGLE+ I +R    S+GF  P          A++      D LV   ++ E  GR                       + PL E+ LV +LT P NAL KQY+K+  M NV+  F
Sbjct:  181 ADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVP--PQGGRKHPYQDCIQIDTSNILFICGGAFVGLERVIEQRIGKKSMGFVRPGEGQSKEKRAADLMQRVEPDDLVKFGMIPEFVGR-----------------IPVMAALNPLTEETLVAILTKPRNALVKQYQKLLNMDNVELEF 361          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_CLOB8 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=clpX PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.083e-33
Identity = 89/199 (44.72%), Postives = 120/199 (60.30%), Query Frame = 1
Query:    4 ADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMR--TGGLTDALVTSSLL------ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAF 573
            AD+D   A+RGI+YIDE  KI  K+E+P+  RDVSGEGVQQALLK+LEGTV +VP    G RKHP  + I I+T +ILFICGGAF G++K I  R + SS+GFGA ++A      G L   ++ + LL      E  GR                       ++ L+++ L+Q+LT P NAL KQYKK+F + +V+  F
Sbjct:  165 ADYDVEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVP--PQGGRKHPHQEFIQINTSNILFICGGAFDGVDKIIENRTRKSSMGFGAQIQAKHEKDVGSLLKEIMPADLLKFGLIPEFVGR-----------------LPILVTLESLDKEALIQILTKPKNALVKQYKKLFELDDVKLEF 344          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_BARBK (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=clpX PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.083e-33
Identity = 94/231 (40.69%), Postives = 132/231 (57.14%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLL------ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            +AD++   AQRGIVYIDE  KI  KA++P+  RDVSGEGVQQALLK++EGT+ +VP    G RKHP+ + + +DT +ILFICGGAF GLE+ IS R + +SIGF A ++A    R G +   L    L+      E  GR                       ++ L+ D LV++L+ P NAL KQY+ +F M NV+  F+   L     K   +K    G ++ ++K +L
Sbjct:  169 SADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVP--PQGGRKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATIKAPDERRVGEIFHDLEPEDLVKFGLIPEFIGR-----------------LPIIATLEDLDIDALVRILSQPKNALVKQYQHLFEMENVELTFHEDALRAIANKAIERKTGARGLRSIMEKILL 380          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_ALKMQ (ATP-dependent Clp protease ATP-binding subunit clpX OS=Alkaliphilus metalliredigens (strain QYMF) GN=clpX PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.083e-33
Identity = 94/227 (41.41%), Postives = 128/227 (56.39%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANM--RTGGLTDALVTSSLL------ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIK 654
            AAD+D   A++GI+YIDE  K+  K+E+P+  RDVSGEGVQQALLK+LEGTV +VP    G RKHP  + I IDT +ILFICGGAF G+EK I +R   +S+GFGA V++ +    GGL   +    LL      E  GR                       +  L+E  L+++LT+P NAL KQYKK+F +  V   F    L +  +K   +K    G +  ++
Sbjct:  164 AADYDIEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVP--PQGGRKHPHQEFIQIDTTNILFICGGAFDGIEKLIQKRTGKTSMGFGADVKSKVVKDIGGLLKQIQPEDLLKFGLIPEFVGR-----------------LPVIVTLDQLDEAALIEILTEPKNALVKQYKKLFEIDGVNVEFEGEALKLIAEKAIERKTGARGLRGIVE 371          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_XANOR (ATP-dependent Clp protease ATP-binding subunit clpX OS=Xanthomonas oryzae pv. oryzae GN=clpX PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.251e-33
Identity = 93/246 (37.80%), Postives = 139/246 (56.50%), Query Frame = 1
Query:    7 DFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDS-SIGFGAPVRANMRTGGL---------TDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTILTKRAWLKIPAKPNMA 711
            D+D   AQ+GIVYIDE  KI  K+E+P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DTK+ILFICGGAF GL+K I +R  D+  IGFGA V+++ R   +          D +    + E  GR                       ++ L+E  L+++LT+P NA+ KQ+KK+F M  V+  F    L+   +K   +K    G +  ++  +L      ++P++ N++
Sbjct:  172 DYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP--PQGGRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEVGKILAEVEPEDLIKFGLIPEFVGR-----------------LPVVATLEELDEPALIKILTEPKNAITKQFKKLFDMEGVELEFRADALSAIAKKALKRKTGARGLRTIVESVLLD--TMYELPSQENVS 396          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_XANOM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=clpX PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.251e-33
Identity = 93/246 (37.80%), Postives = 139/246 (56.50%), Query Frame = 1
Query:    7 DFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDS-SIGFGAPVRANMRTGGL---------TDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTILTKRAWLKIPAKPNMA 711
            D+D   AQ+GIVYIDE  KI  K+E+P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DTK+ILFICGGAF GL+K I +R  D+  IGFGA V+++ R   +          D +    + E  GR                       ++ L+E  L+++LT+P NA+ KQ+KK+F M  V+  F    L+   +K   +K    G +  ++  +L      ++P++ N++
Sbjct:  172 DYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP--PQGGRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEVGKILAEVEPEDLIKFGLIPEFVGR-----------------LPVVATLEELDEPALIKILTEPKNAITKQFKKLFDMEGVELEFRADALSAIAKKALKRKTGARGLRTIVESVLLD--TMYELPSQENVS 396          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_XANC5 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=clpX PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.251e-33
Identity = 93/246 (37.80%), Postives = 139/246 (56.50%), Query Frame = 1
Query:    7 DFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDS-SIGFGAPVRANMRTGGL---------TDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTILTKRAWLKIPAKPNMA 711
            D+D   AQ+GIVYIDE  KI  K+E+P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DTK+ILFICGGAF GL+K I +R  D+  IGFGA V+++ R   +          D +    + E  GR                       ++ L+E  L+++LT+P NA+ KQ+KK+F M  V+  F    L+   +K   +K    G +  ++  +L      ++P++ N++
Sbjct:  172 DYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP--PQGGRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEVGKILAEVEPEDLIKFGLIPEFVGR-----------------LPVVATLEELDEPALIKILTEPKNAITKQFKKLFDMEGVELEFRPDALSAIAKKALKRKTGARGLRTIVESVLLD--TMYELPSQENVS 396          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_XANAC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Xanthomonas axonopodis pv. citri GN=clpX PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.251e-33
Identity = 93/246 (37.80%), Postives = 139/246 (56.50%), Query Frame = 1
Query:    7 DFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDS-SIGFGAPVRANMRTGGL---------TDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTILTKRAWLKIPAKPNMA 711
            D+D   AQ+GIVYIDE  KI  K+E+P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DTK+ILFICGGAF GL+K I +R  D+  IGFGA V+++ R   +          D +    + E  GR                       ++ L+E  L+++LT+P NA+ KQ+KK+F M  V+  F    L+   +K   +K    G +  ++  +L      ++P++ N++
Sbjct:  172 DYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP--PQGGRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEVGKILAEVEPEDLIKFGLIPEFVGR-----------------LPVVATLEELDEPALIKILTEPKNAITKQFKKLFDMEGVELEFRPDALSAIAKKALKRKTGARGLRTIVESVLLD--TMYELPSQENVS 396          
The following BLAST results are available for this feature:
BLAST of EY735204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPX_BART15.424e-3340.69ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_OLICO7.083e-3341.56ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_CYAA57.083e-3347.50ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_CLOB87.083e-3344.72ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BARBK7.083e-3340.69ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_ALKMQ7.083e-3341.41ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_XANOR9.251e-3337.80ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_XANOM9.251e-3337.80ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_XANC59.251e-3337.80ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_XANAC9.251e-3337.80ATP-dependent Clp protease ATP-binding subunit clp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-102-H01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735204 ID=EY735204; Name=EY735204; organism=Citrus sinensis; type=EST; length=770bp
GCTGCTGATTTCGACCCCTTTTCAGCTCAGAGAGGGATCGTCTACATTGA
TGAAGCTTATAAGATAGTGAAGGCTGAGAGTCCAAACAATGGCAGAGATG
TATCGGGCGAGGGAGTCCAACAGGCATTACTGAAAATGCTAGAAGGAACT
GTAGTAAATGTTCCTATACCTGATAACGGACCTCGGAAGCATCCTCGTGG
TGATAACATTCCAATTGATACGAAAGATATCCTTTTCATATGTGGTGGTG
CCTTTGTTGGTTTGGAGAAGACAATTTCAGAGAGACGGCAAGATTCTTCT
ATTGGCTTTGGAGCACCAGTCCGTGCCAACATGAGAACTGGTGGATTGAC
TGATGCGCTTGTGACGTCATCATTGTTGGAATCATCAGGTAGATAGTGGT
GATCTTGTAACATATGGCCTCATTCCTGAATTCATTGGACGGATTCCGAT
TTTAATGAGCTTGTCCAGCCTTTAAATGAGGATCAACTTGTTCAGGTTCT
CACGGATCCCATAAATGCTCTTGGAAAACAGTACAAAAAGATGTTCACCA
TGATTAATGTCCAAACTGCCTTTTACTGATGATGCCTTGCGATTGGTTGC
CAAAAAAAGCATGGCAAAAAACACTGGGGCTCCGGGGCCAAGAACCCTAT
TAAAAAAACAATCCTCACAAAACGCGCATGGTTGAAAATTCCCGCAAAAC
CAAACATGGCACTTCTAGCTCGTAATATGCCTATTTGGTACAAATAAGGA
GGCGCTTATGGCTCATATTG
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