EY735204
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_XANC8 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Xanthomonas campestris pv. campestris (strain 8004) GN=clpX PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.578e-32 Identity = 93/246 (37.80%), Postives = 139/246 (56.50%), Query Frame = 1 Query: 7 DFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDS-SIGFGAPVRANMRTGGL---------TDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTILTKRAWLKIPAKPNMA 711 D+D AQ+GIVYIDE KI K+E+P+ RDVSGEGVQQALLK++EGTV +VP G RKHP+ + + +DTK+ILFICGGAF GL+K I R D+ IGFGA V+++ R + D + + E GR ++ L+E L+++LT+P NA+ KQ+KK+F M +V+ F L+ +K +K G + ++ +L ++P++ N++ Sbjct: 172 DYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP--PQGGRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQARSNDAGGIGFGAKVKSSERKQEVGKILAEVEPEDLIKFGLIPEFVGR-----------------LPVVATLEELDEPALIKILTEPKNAITKQFKKLFEMESVELEFRPDALSAIAKKALKRKTGARGLRTIVESVLLD--TMYELPSQENVS 396
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_SYNY3 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Synechocystis sp. (strain PCC 6803) GN=clpX PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.578e-32 Identity = 101/254 (39.76%), Postives = 135/254 (53.15%), Query Frame = 1 Query: 4 ADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVR--------ANMRTGGLTDALVTSSLL-ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTILTKRAWLKIPAKPNM--ALLARNM 729 AD D AQRGI+YIDE KI K+E+P+ RDVSGEGVQQALLKMLEGTV NVP G RKHP D I IDT +ILFICGGAFVGLEK I +R S+GF P A++ D LV L+ E GR + PL+ED L+ +LT P NA+ KQY+ + M +V+ F + + H +K + +++ +L ++P++ ++ L+ R M Sbjct: 191 ADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVP--PQGGRKHPYQDCIQIDTSNILFICGGAFVGLEKVIEQRFGKKSMGFVRPGEGPSKEKRTADVLRQAEPDDLVKFGLIPEFIGR-----------------IPVMACLNPLDEDALIAILTQPRNAIVKQYQTLLGMDHVELDFQPDAVRAIATEAHRRKTGARALRGIVEELMLD--VMYELPSREDLTHCLITREM 423
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_SHEAM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=clpX PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.061e-32 Identity = 96/231 (41.56%), Postives = 126/231 (54.55%), Query Frame = 1 Query: 7 DFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDA--------LVTSSLL-ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666 D+D AQRGIVYIDE KI K+++P+ RDVSGEGVQQALLK++EGTV VP G RKHP+ + + +DT ILFICGGAF GLEK I +R S IGFGA V+ ++D LV L+ E GR + L+ED L+Q+L++P NAL KQY +F M NV+ F L QK +K G ++ ++ +L Sbjct: 170 DYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVP--PQGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRTHTGSGIGFGAQVKGKEEKESMSDILSQVEPEDLVKYGLIPEFIGR-----------------LPVVATLAELDEDALIQILSEPKNALTKQYAALFEMENVELEFREDALKAIAQKAMSRKTGARGLRSIVEGILL 381
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_NEIG1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=clpX PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.061e-32 Identity = 91/230 (39.57%), Postives = 126/230 (54.78%), Query Frame = 1 Query: 7 DFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLT---------DALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666 DFD A+ GIVYIDE KI K+++P+ RDVSGEGVQQALLK++EGTV +VP G RKHP + I +DT +ILFICGGAF GLEK I +R + IGFGA V + G+T D + + E GR ++ L+ED L+ +LT+P NAL KQY+ +F + NV F L ++ +K G ++ +++ +L Sbjct: 170 DFDVEKARHGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP--PQGGRKHPNQEFINVDTANILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSKDENAGITKLFGIVEPEDLIKFGLIPELIGR-----------------LPVIATLEELDEDALINILTEPKNALVKQYQALFGIENVGLEFEEGALRSIARQAMERKTGARGLRSIVERCLL 380
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_XANOP (ATP-dependent Clp protease ATP-binding subunit clpX OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=clpX PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.692e-32 Identity = 92/246 (37.40%), Postives = 138/246 (56.10%), Query Frame = 1 Query: 7 DFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDS-SIGFGAPVRANMRTGGL---------TDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTILTKRAWLKIPAKPNMA 711 D+D AQ+GIVYIDE KI K+E+P+ RDVSGEGVQQALLK++EGTV +VP G RKHP+ + + +DTK+ILFICGGAF GL+K I +R D+ IGFG V+++ R + D + + E GR ++ L+E L+++LT+P NA+ KQ+KK+F M V+ F L+ +K +K G + ++ +L ++P++ N++ Sbjct: 172 DYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP--PQGGRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGVKVKSSERKQEVGKILAEVEPEDLIKFGLIPEFVGR-----------------LPVVATLEELDEPALIKILTEPKNAITKQFKKLFDMEGVELEFRADALSAIAKKALKRKTGARGLRTIVESVLLD--TMYELPSQENVS 396
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_SYNP6 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpX PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.692e-32 Identity = 91/200 (45.50%), Postives = 113/200 (56.50%), Query Frame = 1 Query: 4 ADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAP---------VRANMRTGGLTDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAF 573 AD D AQRGI+YIDE KI K+E+P+ RDVSGEGVQQALLKMLEGT+ NVP G RKHP D I IDT++ILFICGGAFVGLEK + R SIGF P A +R D + + E GR ++ PL+E L ++LT+P +AL KQY+K+ M +V+ F Sbjct: 195 ADLDIEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVP--PQGGRKHPYQDCIQIDTRNILFICGGAFVGLEKLVDRRLGKKSIGFVHPEESKTKEQRAAAILRHMEPEDLVQFGLIPEFIGR-----------------MPVTAVLDPLDETALTEILTEPRDALVKQYQKLMHMDSVELEF 375
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_SYNE7 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Synechococcus elongatus (strain PCC 7942) GN=clpX PE=3 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 2.692e-32 Identity = 91/200 (45.50%), Postives = 113/200 (56.50%), Query Frame = 1 Query: 4 ADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAP---------VRANMRTGGLTDALVTSSLLESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAF 573 AD D AQRGI+YIDE KI K+E+P+ RDVSGEGVQQALLKMLEGT+ NVP G RKHP D I IDT++ILFICGGAFVGLEK + R SIGF P A +R D + + E GR ++ PL+E L ++LT+P +AL KQY+K+ M +V+ F Sbjct: 195 ADLDIEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVP--PQGGRKHPYQDCIQIDTRNILFICGGAFVGLEKLVDRRLGKKSIGFVHPEESKTKEQRAAAILRHMEPEDLVQFGLIPEFIGR-----------------MPVTAVLDPLDETALTEILTEPRDALVKQYQKLMHMDSVELEF 375
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_DIAST (ATP-dependent Clp protease ATP-binding subunit clpX OS=Diaphorobacter sp. (strain TPSY) GN=clpX PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.692e-32 Identity = 95/232 (40.95%), Postives = 129/232 (55.60%), Query Frame = 1 Query: 1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDA--------LVTSSLL-ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666 + ++D AQRGIVYIDE KI K+++P+ RDVSGEGVQQALLK++EGT+ +VP G RKHP D + IDT +ILFICGGAF GLEK I R + S IGFGA VR+ + LT+ L+ L+ E GR + L+ED LVQ+LT+P NAL KQY K+ M V+ L +K +K G ++ +++ ++ Sbjct: 171 SCNYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVP--PQGGRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVRSK-KQRSLTEVFQDIEPEDLIKFGLIPELVGR-----------------MPVVTALAELSEDALVQILTEPKNALVKQYSKLLAMEGVELEIRPAALKSIARKAIARKTGARGLRSILEQALI 382
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_DESPS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Desulfotalea psychrophila GN=clpX PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.692e-32 Identity = 93/230 (40.43%), Postives = 131/230 (56.96%), Query Frame = 1 Query: 1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRT-GGLTDALVTSSLL------ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666 AAD+D AQRGI+YIDE KI K++S + RDVSGEGVQQALLK++EGTV +VP G RKHP+ + + IDT +ILFICGGAFVGL + + R SIGF A + A+ R+ L +A+ LL E GR ++ L+ED LV++L +P NAL +Q++K+F V+ F LA +K +K G ++ +++ +L Sbjct: 169 AADYDVEKAQRGIIYIDEIDKIARKSDSASLTRDVSGEGVQQALLKIIEGTVASVP--PKGGRKHPQQELVKIDTTNILFICGGAFVGLGRVVKRRAGKKSIGFSADLSADKRSESELLEAVRPEDLLKFGLIPELVGR-----------------LPVIASLRELSEDDLVRILREPKNALTRQFEKLFQFEGVKLTFTEGSLAAVAKKAIARKSGARGLRSVLEEAML 379
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_ACISJ (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acidovorax sp. (strain JS42) GN=clpX PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.692e-32 Identity = 95/232 (40.95%), Postives = 129/232 (55.60%), Query Frame = 1 Query: 1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDA--------LVTSSLL-ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666 + ++D AQRGIVYIDE KI K+++P+ RDVSGEGVQQALLK++EGT+ +VP G RKHP D + IDT +ILFICGGAF GLEK I R + S IGFGA VR+ + LT+ L+ L+ E GR + L+ED LVQ+LT+P NAL KQY K+ M V+ L +K +K G ++ +++ ++ Sbjct: 171 SCNYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVP--PQGGRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVRSK-KQRSLTEVFQDIEPEDLIKFGLIPELVGR-----------------MPVVTALAELSEDALVQILTEPKNALVKQYSKLLAMEGVELEIRPAALKSIARKAIARKTGARGLRSILEQALI 382 The following BLAST results are available for this feature:
BLAST of EY735204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY735204 ID=EY735204; Name=EY735204; organism=Citrus sinensis; type=EST; length=770bpback to top |