EY735093

Overview
NameEY735093
Unique NameEY735093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_NOSCE (Probable phenylalanyl-tRNA synthetase alpha chain OS=Nosema ceranae (strain BRL01) GN=NCER_100038 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.426e-33
Identity = 60/148 (40.54%), Postives = 86/148 (58.11%), Query Frame = 2
Query:   41 DELQKKLDPAVFKIGCSQAGKNKWVE-MGKQVSRKVQNVEDKVKDLLLQVQNGHALSKEEIGSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            D   + L+   + +G   A KNKW++ +G +V +   NVED VK++L  V N     KEEI  LK RKLI       Y ++KGP Y      + T+L  + +  G++K L FK YNFN KG+    G L PL+KVR++++ IFL+MGF
Sbjct:   77 DNGMELLEVDKYNLGKVNAFKNKWIKKVGDKVYKSADNVEDNVKNMLNNVTN-KIYQKEEISLLKKRKLIYQAKEVVYFIKKGPLYGKDSDNI-TELISKMVISGEYKHLNFKPYNFNTKGNIQSQGALHPLMKVREEIRKIFLEMGF 222          

HSP 2 Score: 60.077 bits (144), Expect = 4.426e-33
Identity = 26/43 (60.47%), Postives = 29/43 (67.44%), Query Frame = 3
Query:  456 RTYFSRWVFEEMATNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            R  F    F EM TN FVE +FWNFD LFQPQ HP+RD+ D F
Sbjct:  214 RKIFLEMGFNEMTTNKFVESSFWNFDTLFQPQNHPSRDAHDTF 256          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_ENCCU (Probable phenylalanyl-tRNA synthetase alpha chain OS=Encephalitozoon cuniculi GN=ECU07_1660 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.134e-30
Identity = 48/135 (35.56%), Postives = 85/135 (62.96%), Query Frame = 2
Query:   80 IGCSQAGKNKWVEM-GKQVSRKVQNVEDKVKDLLLQVQNGHALSKEEIGSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            +G   A +NKW+   G +V R V+++ED V+++++ ++ G A S EE+ +L+ RKL+  +    +   KGP +      V T+LT E +  G +++L FK YNFNA+G+  + G + PL+K+R+  + IF+++GF
Sbjct:   91 LGKMNAFRNKWIRREGNRVFRNVESIEDTVRNMVISMKRGTA-SAEEVEALRKRKLVSRRKKIVFIATKGPMFFDNTSYV-TELTSEMVLDGSYRDLSFKHYNFNAEGNAPQCGSIHPLMKIREDFRRIFIELGF 223          

HSP 2 Score: 61.6178 bits (148), Expect = 1.134e-30
Identity = 27/43 (62.79%), Postives = 31/43 (72.09%), Query Frame = 3
Query:  456 RTYFSRWVFEEMATNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            R  F    F EMATN +VE +FWNFDALFQPQ HP+RD+ D F
Sbjct:  215 RRIFIELGFSEMATNQYVESSFWNFDALFQPQNHPSRDAHDTF 257          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_SCHPO (Phenylalanyl-tRNA synthetase alpha chain OS=Schizosaccharomyces pombe GN=SPAC3G9.06 PE=2 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 1.475e-30
Identity = 51/148 (34.46%), Postives = 87/148 (58.78%), Query Frame = 2
Query:   44 ELQKKLDPAVFKIGCSQAGKNKWVEM-GKQVSRKVQNVEDKVKDLLLQV-QNGHALSKEEIGSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            EL+KKL  +   IG  +A K  W++  G ++ +   ++ D+   +L ++ ++G     + +  LK RKL+       +S+RKGPN++ + +K+ TDLT E +    W+  +FK YNF A+G P  GG L PL+KVR++ +  F ++GF
Sbjct:   96 ELKKKLGNSA-GIGQGRAFKLGWIKKDGDKLVKNTDSITDETPKVLSEIKEHGTISDSKTLTDLKKRKLVERNKIMYFSLRKGPNFSLQIEKLNTDLTAEMITSRSWESAKFKSYNFAAEGIPPAGGCLHPLMKVREEFRKFFFELGF 242          

HSP 2 Score: 62.3882 bits (150), Expect = 1.475e-30
Identity = 28/43 (65.12%), Postives = 31/43 (72.09%), Query Frame = 3
Query:  456 RTYFSRWVFEEMATNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            R +F    FEEM TNNFVE  FWNFDALF PQ+H ARD+ D F
Sbjct:  234 RKFFFELGFEEMPTNNFVESGFWNFDALFVPQQHSARDAQDTF 276          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_YEAST (Phenylalanyl-tRNA synthetase alpha chain OS=Saccharomyces cerevisiae GN=FRS2 PE=1 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 2.066e-29
Identity = 55/158 (34.81%), Postives = 87/158 (55.06%), Query Frame = 2
Query:   44 ELQKKLDPAVFKIGCSQAGKNKWVEMGK----QVSRKVQNVE-----DKVKDLLLQVQNGHALSKEE---IGSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            ++  KL P V K+G ++A KN W+        ++S K+QN +     D+ + +L Q++N   L   +   +  LK RKLI       ++V KGP ++    K+ TDLT + +    +K+L+FK YNFN++G     G L PL KVR++ + IF  MGF
Sbjct:   89 DVMSKLGPQVGKVGQARAFKNGWIAKNASNELELSAKLQNTDLNELTDETQSILAQIKNNSHLDSIDAKILNDLKKRKLIAQGKITDFNVTKGPEFSTDLTKLETDLTSDMVSTNAYKDLKFKPYNFNSQGVQISSGALHPLNKVREEFRQIFFSMGF 246          

HSP 2 Score: 54.299 bits (129), Expect = 2.066e-29
Identity = 24/43 (55.81%), Postives = 28/43 (65.12%), Query Frame = 3
Query:  456 RTYFSRWVFEEMATNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            R  F    F EM +N +VE  FWNFDAL+ PQ+HPARD  D F
Sbjct:  238 RQIFFSMGFTEMPSNQYVETGFWNFDALYVPQQHPARDLQDTF 280          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_DICDI (Phenylalanyl-tRNA synthetase alpha chain OS=Dictyostelium discoideum GN=pheSA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.984e-22
Identity = 47/131 (35.88%), Postives = 69/131 (52.67%), Query Frame = 2
Query:   95 AGKNK-WVEM-GKQVSRKVQNVEDKVKDLLLQVQNGHALSKEEIGSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            + KNK W+E+   ++ +KV+++ D VK  L  + +   L  + +   K  + I  +    Y V KG  Y  KR K  +DLT E L+   W++  FK  N NA G   E G+  PL KV+ + K IFL MGF
Sbjct:  106 SAKNKGWIEVKAGKIFKKVESINDIVKSDL-SIPDLSKLDSKTLEQYKKSRFIEEKKLSYYRVTKGEQYN-KRSKELSDLTIEMLKDDSWEKESFK-VNINAMGVVPEQGYRHPLNKVKNEFKQIFLDMGF 233          

HSP 2 Score: 60.077 bits (144), Expect = 1.984e-22
Identity = 26/35 (74.29%), Postives = 28/35 (80.00%), Query Frame = 3
Query:  480 FEEMATNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            FEEM T NFVE  FWNFDALFQPQ+HPAR+  D F
Sbjct:  233 FEEMPTFNFVENGFWNFDALFQPQQHPARELQDTF 267          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_ARCFU (Phenylalanyl-tRNA synthetase alpha chain OS=Archaeoglobus fulgidus GN=pheS PE=3 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 2.341e-15
Identity = 27/52 (51.92%), Postives = 31/52 (59.62%), Query Frame = 3
Query:  471 RWVFEEMA----TNNFVERNFWNFDALFQPQKHPARDSLDNFLSGRTFPLQG 614
            R VF EM       ++V+  FWNFDALFQPQ HPARD  D F   R   L+G
Sbjct:  226 RKVFLEMGFTEIKGHYVQPAFWNFDALFQPQDHPARDMQDTFYLDRYIDLEG 277          

HSP 2 Score: 51.6026 bits (122), Expect = 2.341e-15
Identity = 35/149 (23.49%), Postives = 71/149 (47.65%), Query Frame = 2
Query:   41 DELQKKLDPAVFKIGCSQAGKNKWVEM--GKQVSRKVQNVEDKVKDLLLQVQNGHALSKEEIGSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            DEL+K++    F+I      +   VE+   K V ++  + +++    L  ++ G  + +  + +L  RKL+     K   +        + + + TDLT E L +G W+  +F +Y+         GG + P  ++ ++ + +FL+MGF
Sbjct:   89 DELRKRMGRE-FQIALGWLRRKGAVEVEGDKVVPKREPSFDERAA--LQAIKEGRGVDEGTLKTLMKRKLVTKSETKQVYIEVMKKPEIELEDIITDLTPEMLLEGTWRGKQFLKYDITIPAKEIYGGKIHPYERIIEECRKVFLEMGF 234          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_METMA (Phenylalanyl-tRNA synthetase alpha chain OS=Methanosarcina mazei GN=pheS PE=3 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 1.126e-14
Identity = 25/54 (46.30%), Postives = 30/54 (55.56%), Query Frame = 3
Query:  471 RWVFEEMA----TNNFVERNFWNFDALFQPQKHPARDSLDNFLSGRTFPLQGTY 620
            R +F EM         ++ +FWNFDALFQPQ HPARD  D F  G T  +   Y
Sbjct:  247 RQIFLEMGFTEIKGGIIQSSFWNFDALFQPQDHPARDMQDTFHLGSTCQIPAEY 300          

HSP 2 Score: 50.0618 bits (118), Expect = 1.126e-14
Identity = 41/160 (25.62%), Postives = 67/160 (41.88%), Query Frame = 2
Query:   41 DELQKKLDPAVFKIGCSQAGKNKWVEMGKQVSRKVQNVEDKVKDLLLQVQNGHALSKEEIGS-------LKARKLIVPQTWKGYSVR---KGPNYAPKR---KKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            +EL+    P    I      K  W ++   +        +   +  L    G A + EE+G+       L  RKL+V    K  +V     G   A +    ++    LT E L+ G WKE +F+ Y  +    P  G  + P  ++ +Q++ IFL+MGF
Sbjct:   96 EELRSCFSPQTVGIATGWLVKKGWAKVENGIMVPSGEASEGKDEKALSAFAGKAKTLEELGADEGTVKDLLKRKLVVKHEEKFRTVSITDAGSELASQGLVLEEEIAQLTPELLKSGAWKEKKFRPYRLDITPKPLYGTKIHPYRRLIEQMRQIFLEMGF 255          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_METBF (Phenylalanyl-tRNA synthetase alpha chain OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=pheS PE=3 SV=1)

HSP 1 Score: 49.6766 bits (117), Expect = 7.033e-14
Identity = 41/160 (25.62%), Postives = 68/160 (42.50%), Query Frame = 2
Query:   41 DELQKKLDPAVFKIGCSQAGKNKWVEMGKQVSRKVQNVEDKVKDLLLQVQNGHALSKEEIGS-------LKARKLIVP--QTWKGYSVRKGPNYAPKRKKVATD----LTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            +EL+    P +  I      K  W ++   V      V     +  L    G A + EEIGS       L  RKL++   + ++  S+    N    +  V  +    LT E L+ G WK+ +F+ Y  +       G  + P  ++ +Q++ IFL+MGF
Sbjct:   93 EELRGHFSPKMVGIATGWLVKKGWAKIENGVMVPSGKVNAGKDEETLAAFTGKAKTLEEIGSDQGTIKDLLKRKLVIKHEEKFRTVSITDAGNALATQGLVLEEEIAQLTPELLKSGAWKDKKFRPYRLDITPKSLYGAKIHPYRRLIEQMRQIFLEMGF 252          

HSP 2 Score: 48.9062 bits (115), Expect = 7.033e-14
Identity = 25/54 (46.30%), Postives = 29/54 (53.70%), Query Frame = 3
Query:  471 RWVFEEMA----TNNFVERNFWNFDALFQPQKHPARDSLDNFLSGRTFPLQGTY 620
            R +F EM         ++ +FWNFDALFQPQ HPARD  D F    T  L   Y
Sbjct:  244 RQIFLEMGFAEIKGGIIQSSFWNFDALFQPQDHPARDMQDTFHLNSTCELPTEY 297          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_METKA (Phenylalanyl-tRNA synthetase alpha chain OS=Methanopyrus kandleri GN=pheS PE=3 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 9.122e-14
Identity = 39/122 (31.97%), Postives = 66/122 (54.10%), Query Frame = 2
Query:  125 KQVSRKVQNVEDKVKDLLLQV-QNGHALSKEEIGSLKARKLIVPQTWKGYSVRKGPNYAPK--RKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            ++++RK++  E++V+  L ++ + G  L   E    K R      T +G  V +   +AP+   +   T+L  E+L++G WKE EFK Y+  A   P   G   PL +V  +++ IFL+MGF
Sbjct:  163 EELARKLEMDEEEVEKALKRLSERGDVLRAREETVKKVRL-----TERGEEVAE---HAPEVLERDWITELKPEHLREGTWKEKEFKPYDVKAPTSPTFPGKRHPLKEVINEIRRIFLEMGF 276          

HSP 2 Score: 44.2838 bits (103), Expect = 9.122e-14
Identity = 22/42 (52.38%), Postives = 26/42 (61.90%), Query Frame = 3
Query:  471 RWVFEEMA----TNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            R +F EM     +   VE +FWNFDALFQPQ H AR+  D F
Sbjct:  268 RRIFLEMGFVEVSGPLVESSFWNFDALFQPQDHAAREMQDTF 309          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_METMJ (Phenylalanyl-tRNA synthetase alpha chain OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pheS PE=3 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 9.142e-14
Identity = 27/50 (54.00%), Postives = 33/50 (66.00%), Query Frame = 3
Query:  480 FEEMATNNFVERNFWNFDALFQPQKHPARDSLDNFLSGRTFPLQGTYQRL 629
            FEEM+    V+ +FWNFDALFQPQ HPAR+  D F  G   PL   Y+R+
Sbjct:  240 FEEMS-GGIVQSSFWNFDALFQPQDHPAREMQDTFFLGERRPLPAGYERV 288          

HSP 2 Score: 40.0466 bits (92), Expect = 9.142e-14
Identity = 25/104 (24.04%), Postives = 43/104 (41.35%), Query Frame = 2
Query:  188 QNGHALSKEEIGSLKARKLIVPQTWKGYSVRKGP------NYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            + G     E +  L  R L + +    Y+V   P      +     ++ A  LTRE +  G+WK L  + Y+       A  G + P  ++  +++ I   MGF
Sbjct:  137 EKGEIADGEGVADLAKRGLAIEEETVAYTVSITPRGRELLSQGLDLREEAGTLTREQILSGEWKSLPLRRYDVTKLPKRAYPGKVHPYQRIIDEMRRILFDMGF 240          
The following BLAST results are available for this feature:
BLAST of EY735093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
SYFA_NOSCE4.426e-3340.54Probable phenylalanyl-tRNA synthetase alpha chain ... [more]
SYFA_ENCCU1.134e-3035.56Probable phenylalanyl-tRNA synthetase alpha chain ... [more]
SYFA_SCHPO1.475e-3034.46Phenylalanyl-tRNA synthetase alpha chain OS=Schizo... [more]
SYFA_YEAST2.066e-2934.81Phenylalanyl-tRNA synthetase alpha chain OS=Saccha... [more]
SYFA_DICDI1.984e-2235.88Phenylalanyl-tRNA synthetase alpha chain OS=Dictyo... [more]
SYFA_ARCFU2.341e-1551.92Phenylalanyl-tRNA synthetase alpha chain OS=Archae... [more]
SYFA_METMA1.126e-1446.30Phenylalanyl-tRNA synthetase alpha chain OS=Methan... [more]
SYFA_METBF7.033e-1425.63Phenylalanyl-tRNA synthetase alpha chain OS=Methan... [more]
SYFA_METKA9.122e-1431.97Phenylalanyl-tRNA synthetase alpha chain OS=Methan... [more]
SYFA_METMJ9.142e-1454.00Phenylalanyl-tRNA synthetase alpha chain OS=Methan... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-082-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735093 ID=EY735093; Name=EY735093; organism=Citrus sinensis; type=EST; length=914bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGAAAGACGAATTGC
AGAAAAAGCTTGATCCTGCAGTTTTCAAAATAGGTTGCTCCCAGGCTGGT
AAAAATAAGTGGGTGGAGATGGGGAAGCAAGTTTCGAGGAAGGTTCAAAA
TGTGGAAGACAAAGTCAAAGATTTGCTTCTACAAGTACAAAATGGACATG
CACTTAGCAAAGAGGAGATTGGCAGTCTCAAAGCACGGAAGCTTATTGTT
CCCCAGACATGGAAGGGGTACTCAGTGAGAAAAGGTCCTAATTATGCTCC
CAAAAGGAAGAAAGTTGCTACAGATTTGACTCGAGAGAACCTTCAGAAGG
GTGATTGGAAGGAATTGGAGTTCAAAGAGTACAACTTCAATGCTAAAGGA
CACCCTGCGGAAGGTGGCCATCTTCAACCACTGCTCAAGGTGCGGAAGCA
ATTGAAGGACATATTTCTCCAGATGGGTTTTTGAGGAGATGGCGACAAAC
AATTTTGTTGAAAGAAACTTCTGGAACTTTGATGCCTTGTTCCAGCCCCA
AAAACACCCTGCCCGGGATTCTCTTGATAACTTCTTATCTGGAAGAACCT
TTCCTCTACAAGGAACTTACCAAAGATTATGTTGAGGGGGTGGAACCGGG
GGCCCGAATTTGGGGGGTATTGGGTCCCAAGGAATAGGGTTTAGCGGAAA
AAAAAAGGAAACAAAAAAAGACCTTTTGGGGATTACAAGAATGGGTGGTA
CCTTTCCGAAAGGTTAGAGGCGTGGATTGAAAAACCTTTTACCCAAGAAG
GATGTTCCCGAAGAAACCGGGGCTTAGCAATGAGTATTGGTGGATTAAGA
CAAACCTGGGGGATATCAACAAGAATAAAGAGGGTGCAGGATGGGAAATG
GGATAATCCTCGGT
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