EY735093

Overview
NameEY735093
Unique NameEY735093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_METAC (Phenylalanyl-tRNA synthetase alpha chain OS=Methanosarcina acetivorans GN=pheS PE=3 SV=1)

HSP 1 Score: 49.6766 bits (117), Expect = 1.187e-13
Identity = 25/54 (46.30%), Postives = 29/54 (53.70%), Query Frame = 3
Query:  471 RWVFEEMA----TNNFVERNFWNFDALFQPQKHPARDSLDNFLSGRTFPLQGTY 620
            R +F EM         ++ +FWNFDALFQPQ HPARD  D F  G    L   Y
Sbjct:  244 RQIFLEMGFTEIKGGIIQSSFWNFDALFQPQDHPARDMQDTFHLGSICQLPAEY 297          

HSP 2 Score: 48.1358 bits (113), Expect = 1.187e-13
Identity = 40/160 (25.00%), Postives = 68/160 (42.50%), Query Frame = 2
Query:   41 DELQKKLDPAVFKIGCSQAGKNKWVEMGKQVSRKVQNVEDKVKDLLLQVQNGHALSKEEIGS-------LKARKLIVPQTWKGYSVR-KGPNYAPKRKKVATD-----LTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            +EL+ +  P    I      K  W ++   V     N      + +L    G A + EE+ +       L  RKL++    K  +V   G   A   + +  +     LT E L+ G WK  +F+ Y  +   +P  G  + P  ++ +Q++ IFL+MGF
Sbjct:   93 EELRSRFSPKTVGIATGWLIKKGWAKVENGVMVPSGNAPAGRDEEVLAAFAGKAKTLEELAADEGTVKELLKRKLVIKHEEKSRTVSVTGAGSALAAEGIVLEEEIAQLTPELLKSGAWKGKKFRPYRLDIAPNPLYGVKIHPYRRLIEQMRQIFLEMGF 252          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_PYRFU (Phenylalanyl-tRNA synthetase alpha chain OS=Pyrococcus furiosus GN=pheS PE=3 SV=1)

HSP 1 Score: 48.9062 bits (115), Expect = 1.248e-12
Identity = 19/35 (54.29%), Postives = 25/35 (71.43%), Query Frame = 3
Query:  480 FEEMATNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            F E+  ++ +E  FWNFDALFQPQ HPAR+  D +
Sbjct:  256 FIEITVDSLIETQFWNFDALFQPQNHPAREWTDTY 290          

HSP 2 Score: 45.4394 bits (106), Expect = 1.248e-12
Identity = 47/171 (27.49%), Postives = 74/171 (43.27%), Query Frame = 2
Query:   41 DELQKKLDPAVFKIGCSQAGKNKWVEMGK-------QVSRKVQNVEDKVKDLLLQV--QNGHALSKE-----EIGSLKARKL---------IVPQTWKGYS-VRKGPNYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            DEL+  L     K       K  WV++ K       +++ + +N E++  D  L++  +  +A S+E      I  LK RK+         I   T KG   V+KG       K+  T LT E +  G W+E+EFK +N  A       G  QP      +++   ++MGF
Sbjct:   90 DELRGVLTEDELKPIVGILRKEGWVKVEKTPEGLVLEITERGENPEERPIDKALKILSEKEYATSEEISKIVPINELKRRKVAQEEEVVERIAEITEKGVELVKKGIEL----KREVTSLTPELIASGKWREVEFKPFNIKAPVKKIYPGKKQPYRVFLDKIRRKLIEMGF 256          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_PYRHO (Phenylalanyl-tRNA synthetase alpha chain OS=Pyrococcus horikoshii GN=pheS PE=3 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 1.620e-12
Identity = 20/35 (57.14%), Postives = 25/35 (71.43%), Query Frame = 3
Query:  480 FEEMATNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            F EM  ++ +E  FWNFDALFQPQ HPAR+  D +
Sbjct:  256 FIEMTVDSLIETQFWNFDALFQPQNHPAREWTDTY 290          

HSP 2 Score: 43.5134 bits (101), Expect = 1.620e-12
Identity = 43/150 (28.67%), Postives = 64/150 (42.67%), Query Frame = 2
Query:  101 KNKWVEMGK-------QVSRKVQNVEDKVKDLLLQVQNGHALSKEEIGS------LKARKLI---------VPQTWKGYS-VRKGPNYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            K  W E+ K       ++S K +  E +  D+ L+V +   +S EEI        LK RK+          V  T KG   V KG       K+  + LT E +  G W+E+EFK +N  A       G  QP      +++   ++MGF
Sbjct:  111 KEGWAEVSKTKEGLTLKLSEKGKKAEKRAIDIALEVLSKGEVSVEEIEKIISVKELKRRKIAEEEEKVIRNVEITDKGLELVEKGIEL----KREVSILTPELIVTGKWREVEFKPFNIKAPVKKIYPGKKQPYRVFLDKIRRRLIEMGF 256          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_METLZ (Phenylalanyl-tRNA synthetase alpha chain OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=pheS PE=3 SV=1)

HSP 1 Score: 47.7506 bits (112), Expect = 1.622e-12
Identity = 18/43 (41.86%), Postives = 28/43 (65.12%), Query Frame = 3
Query:  501 NFVERNFWNFDALFQPQKHPARDSLDNFLSGRTFPLQGTYQRL 629
            + V+ +FWNFD+L+QPQ HPAR+  D F      PL   ++++
Sbjct:  241 SIVQNSFWNFDSLYQPQDHPAREMQDTFHLAEELPLPNGWEKI 283          

HSP 2 Score: 46.2098 bits (108), Expect = 1.622e-12
Identity = 33/139 (23.74%), Postives = 61/139 (43.88%), Query Frame = 2
Query:   77 KIGCSQAGKNKWVEMGKQVSRKVQNVEDKVKDLLLQVQNGHALSKEEIGSLKARKLIVPQTWKGYSVRKGPNYAPK----RKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            KI      K  WV +   +    +N      +L L+       + +E+      +++   +WK      G   A      R++VAT LTRE +  G+WK L  ++Y+ +       GG + P  ++  +++D+  +MGF
Sbjct:   98 KIAIGWLRKKNWVTIKDGIVFVNENTAVGEDELALKNPVPGTPACKELAKRGLVEVVEKTSWKIALTTDGEKIAKDGLDLREEVAT-LTREQILSGEWKSLPLRKYSIDKLPKKIYGGRVHPNQQILDEIRDLLFEMGF 235          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_ENTBH (Probable phenylalanyl-tRNA synthetase alpha chain OS=Enterocytozoon bieneusi (strain H348) GN=EBI_22775 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.543e-11
Identity = 45/130 (34.62%), Postives = 69/130 (53.08%), Query Frame = 2
Query:   95 AGKNKWVEM-GKQVSRKVQNVEDKVKDLLLQVQNGHALSKEEIGSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            A KNKW++M   Q+      ++D  + LL   +N  ++SK+E   LK RKL+       Y + +G N+  ++K +  +LT +NL       L  K+YNFN        G L PL K++ + K IFL+MGF
Sbjct:   93 AFKNKWIKMENNQIVLSGTTIQDITQKLL---RNLDSISKDEFEELKKRKLVDINKKNIYKITRGENFNIEQKDIINELTTQNLFNISDTSL-LKKYNFNLSKVSRFFGSLHPLTKIKSEFKRIFLEMGF 218          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_METTH (Phenylalanyl-tRNA synthetase alpha chain OS=Methanobacterium thermoautotrophicum GN=pheS PE=1 SV=1)

HSP 1 Score: 46.9802 bits (110), Expect = 6.255e-11
Identity = 19/55 (34.55%), Postives = 36/55 (65.45%), Query Frame = 2
Query:  317 ATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            AT +T E+L+ G W++L ++ YN +A+      G + PL ++  +++ IFL++GF
Sbjct:  212 ATQVTHEHLKSGAWRKLHYRGYNIDAEYPLVYPGKMHPLRRIIDEIRSIFLKLGF 266          

HSP 2 Score: 41.5874 bits (96), Expect = 6.255e-11
Identity = 21/43 (48.84%), Postives = 25/43 (58.14%), Query Frame = 3
Query:  456 RTYFSRWVFEEMATNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            R+ F +  F E +    VE  FWNFD LFQPQ H AR+  D F
Sbjct:  258 RSIFLKLGFTE-SRGPIVESAFWNFDCLFQPQDHAAREMQDTF 299          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_PYRKO (Phenylalanyl-tRNA synthetase alpha chain OS=Pyrococcus kodakaraensis GN=pheS PE=1 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 6.258e-11
Identity = 20/35 (57.14%), Postives = 25/35 (71.43%), Query Frame = 3
Query:  480 FEEMATNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            F EM  ++ +E  FWNFDALFQPQ HPAR+  D +
Sbjct:  257 FIEMTVDSLIETQFWNFDALFQPQNHPAREWTDTY 291          

HSP 2 Score: 38.1206 bits (87), Expect = 6.258e-11
Identity = 40/171 (23.39%), Postives = 69/171 (40.35%), Query Frame = 2
Query:   41 DELQKKLDPAVFKIGCSQAGKNKWVEMGKQVSRKVQNVEDKVKD---------LLLQVQNGHALSKE-----EIGSLKARKL---------IVPQTWKGYS-VRKGPNYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            D+L+  L     K       +  W  + K+  + V  + +K ++         L L  + G    KE      +  LK RK+         +   T KG   V+KG       KK  + LT E ++ G W+E+EF++++  A       G  QP      +++   ++MGF
Sbjct:   91 DDLKDVLSEDELKPIVGLLRREGWANVRKEDGKLVLEITEKGREASERPIDKALKLLAERGEVPVKEIEKLVPVNELKRRKIGEEDVITERVAEITEKGEELVKKGLEL----KKEVSVLTPELIKSGKWREVEFRKFDIKAPVRRIYPGKKQPYRAFLDKIRRRLIEMGF 257          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_THEON (Phenylalanyl-tRNA synthetase alpha chain OS=Thermococcus onnurineus (strain NA1) GN=pheS PE=3 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 6.259e-11
Identity = 20/35 (57.14%), Postives = 25/35 (71.43%), Query Frame = 3
Query:  480 FEEMATNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            F EM  ++ +E  FWNFDALFQPQ HPAR+  D +
Sbjct:  257 FIEMTVDSLIETQFWNFDALFQPQNHPAREWTDTY 291          

HSP 2 Score: 38.1206 bits (87), Expect = 6.259e-11
Identity = 25/95 (26.32%), Postives = 42/95 (44.21%), Query Frame = 2
Query:  215 EIGSLKARKLIVPQTWKGYSVRKGP------NYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            ++  LK RK+         +V   P      N   + K+  + LT E ++ G W+E+EFK +N  A       G  QP      +++   ++MGF
Sbjct:  163 KVNDLKRRKIAEEDIVTERTVEITPEGEELANKGLELKEEVSTLTPELIKSGKWREVEFKRFNIQAPVRRIYPGKKQPYRAFLDKIRRRLIEMGF 257          
The following BLAST results are available for this feature:
BLAST of EY735093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
SYFA_METAC1.187e-1346.30Phenylalanyl-tRNA synthetase alpha chain OS=Methan... [more]
SYFA_PYRFU1.248e-1254.29Phenylalanyl-tRNA synthetase alpha chain OS=Pyroco... [more]
SYFA_PYRHO1.620e-1257.14Phenylalanyl-tRNA synthetase alpha chain OS=Pyroco... [more]
SYFA_METLZ1.622e-1241.86Phenylalanyl-tRNA synthetase alpha chain OS=Methan... [more]
SYFA_ENTBH1.543e-1134.62Probable phenylalanyl-tRNA synthetase alpha chain ... [more]
SYFA_METTH6.255e-1134.55Phenylalanyl-tRNA synthetase alpha chain OS=Methan... [more]
SYFA_PYRKO6.258e-1157.14Phenylalanyl-tRNA synthetase alpha chain OS=Pyroco... [more]
SYFA_THEON6.259e-1157.14Phenylalanyl-tRNA synthetase alpha chain OS=Thermo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-082-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735093 ID=EY735093; Name=EY735093; organism=Citrus sinensis; type=EST; length=914bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGAAAGACGAATTGC
AGAAAAAGCTTGATCCTGCAGTTTTCAAAATAGGTTGCTCCCAGGCTGGT
AAAAATAAGTGGGTGGAGATGGGGAAGCAAGTTTCGAGGAAGGTTCAAAA
TGTGGAAGACAAAGTCAAAGATTTGCTTCTACAAGTACAAAATGGACATG
CACTTAGCAAAGAGGAGATTGGCAGTCTCAAAGCACGGAAGCTTATTGTT
CCCCAGACATGGAAGGGGTACTCAGTGAGAAAAGGTCCTAATTATGCTCC
CAAAAGGAAGAAAGTTGCTACAGATTTGACTCGAGAGAACCTTCAGAAGG
GTGATTGGAAGGAATTGGAGTTCAAAGAGTACAACTTCAATGCTAAAGGA
CACCCTGCGGAAGGTGGCCATCTTCAACCACTGCTCAAGGTGCGGAAGCA
ATTGAAGGACATATTTCTCCAGATGGGTTTTTGAGGAGATGGCGACAAAC
AATTTTGTTGAAAGAAACTTCTGGAACTTTGATGCCTTGTTCCAGCCCCA
AAAACACCCTGCCCGGGATTCTCTTGATAACTTCTTATCTGGAAGAACCT
TTCCTCTACAAGGAACTTACCAAAGATTATGTTGAGGGGGTGGAACCGGG
GGCCCGAATTTGGGGGGTATTGGGTCCCAAGGAATAGGGTTTAGCGGAAA
AAAAAAGGAAACAAAAAAAGACCTTTTGGGGATTACAAGAATGGGTGGTA
CCTTTCCGAAAGGTTAGAGGCGTGGATTGAAAAACCTTTTACCCAAGAAG
GATGTTCCCGAAGAAACCGGGGCTTAGCAATGAGTATTGGTGGATTAAGA
CAAACCTGGGGGATATCAACAAGAATAAAGAGGGTGCAGGATGGGAAATG
GGATAATCCTCGGT
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