EY735088

Overview
NameEY735088
Unique NameEY735088
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDX1_STELP (Probable pyridoxal biosynthesis protein PDX1 (Fragment) OS=Stellaria longipes PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.176e-26
Identity = 55/78 (70.51%), Postives = 70/78 (89.74%), Query Frame = 1
Query:  400 NSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            ++GN+VE V+++RS+MG+IR+L NMD+DEVF +AKKI+A YDLV QTKQ+GRLPVV FAAGGV TPADAALMM +GC+
Sbjct:   92 STGNVVEAVRHIRSVMGEIRLLRNMDDDEVFAYAKKISAAYDLVMQTKQLGRLPVVNFAAGGVATPADAALMMQLGCD 169          
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_METVA (Pyridoxal biosynthesis lyase pdxS (Fragment) OS=Methanococcus vannielii GN=pdxS PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.756e-26
Identity = 51/107 (47.66%), Postives = 76/107 (71.03%), Query Frame = 1
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLM-GDIRILNNMD---EDEVFTFAK-KIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +NLGEALRRI EGAAMIR +G+   +GN+VE VK++R++  G  R++   +   E E+   A+ ++  P +++ +  ++ RLPVV FAAGG+ TPADAALMM +GC+
Sbjct:   68 RNLGEALRRIDEGAAMIRTKGEA-GTGNVVEAVKHMRAVNEGIARVVGYHEMGLEAELVQMARNELKVPMEIILEVAKLKRLPVVNFAAGGIATPADAALMMQMGCD 173          

HSP 2 Score: 49.2914 bits (116), Expect = 1.756e-26
Identity = 20/34 (58.82%), Postives = 28/34 (82.35%), Query Frame = 2
Query:  233 DPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            DP ++  +K AVS+PVM++ R+GHFVEAQ+LE I
Sbjct:    1 DPDMIFEIKDAVSIPVMAKARIGHFVEAQVLESI 34          
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_PICTO (Pyridoxal biosynthesis lyase pdxS OS=Picrophilus torridus GN=pdxS PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.165e-25
Identity = 46/135 (34.07%), Postives = 70/135 (51.85%), Query Frame = 1
Query:  340 EALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDL-------------------------------------VAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            EA+RRI EGAAMIR +G+   +GNI+E ++++R +   I +L  ++E ++   A+ IA+ Y +                                     + + K+  RLPVV FAAGGV TP+DAALMM +G +
Sbjct:  143 EAVRRIFEGAAMIRTKGEA-GTGNIIEAMRHIRKVNDGINVLLRLNESDMKKVAENIASSYFILRKETSKELFGYDNFPDMDDLYYGMDSDKIINGILKTLKEIKKYRRLPVVNFAAGGVATPSDAALMMKMGLD 276          

HSP 2 Score: 65.0846 bits (157), Expect = 3.165e-25
Identity = 33/75 (44.00%), Postives = 50/75 (66.67%), Query Frame = 2
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V++ EQA+IAE AGA ++M  E       +  G+ RM DP  +K +  AVS+PVM++VR+GH  EA +LE +
Sbjct:   31 IMDVTTAEQARIAEKAGAVAVMALERVPADIRANGGVARMADPLKIKEIIDAVSIPVMAKVRIGHISEAYVLESL 105          
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_ANOFW (Pyridoxal biosynthesis lyase pdxS OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=pdxS PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 6.042e-23
Identity = 58/124 (46.77%), Postives = 86/124 (69.35%), Query Frame = 1
Query:  262 RRFSPRYVTCSCWAFC*SADS*KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            R+F+  +V C C          ++LGEA RRI EGA+M+R +G+   +GNIVE V+++R +   +R + +M EDE+ T AK + AP++++ + K++GRLPVV FAAGGV TPADAALMM +G +
Sbjct:  119 RQFTVPFV-CGC----------RDLGEAARRIAEGASMLRTKGEP-GTGNIVEAVRHMRKVNAQVRKVVSMSEDELMTEAKNLGAPFEVLLEIKRLGRLPVVNFAAGGVATPADAALMMHLGAD 230          

HSP 2 Score: 72.7886 bits (177), Expect = 3.658e-12
Identity = 35/75 (46.67%), Postives = 55/75 (73.33%), Query Frame = 2
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQAKIAEAAGA ++M  E       +  G+ RM DP++++ V +AVS+PVM++ R+GH+VEA++LE +
Sbjct:   22 IMDVVNAEQAKIAEAAGAVAVMALERVPADIRAAGGVARMADPTVIEEVMKAVSIPVMAKARIGHYVEARVLEAL 96          
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_GEOKA (Pyridoxal biosynthesis lyase pdxS OS=Geobacillus kaustophilus GN=pdxS PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.346e-22
Identity = 59/124 (47.58%), Postives = 85/124 (68.55%), Query Frame = 1
Query:  262 RRFSPRYVTCSCWAFC*SADS*KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            R+F+  +V C C          ++LGEA RRI EGA+M+R +G+   +GNIVE V+++R +   IR + NM EDE+   AK++ AP +++ + K++GRLPVV FAAGGV TPADAALMM +G +
Sbjct:  119 RQFTVPFV-CGC----------RDLGEAARRIAEGASMLRTKGEP-GTGNIVEAVRHMRKVNAQIRKVVNMSEDELVAEAKQLGAPVEVLREIKRLGRLPVVNFAAGGVATPADAALMMHLGAD 230          

HSP 2 Score: 73.559 bits (179), Expect = 2.144e-12
Identity = 36/75 (48.00%), Postives = 55/75 (73.33%), Query Frame = 2
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQAKIAEAAGA ++M  E       +  G+ RM DP++++ V  AVS+PVM++VR+GH+VEA++LE +
Sbjct:   22 IMDVVNAEQAKIAEAAGAVAVMALERVPADIRAAGGVARMADPTVIEEVMNAVSIPVMAKVRIGHYVEARVLEAL 96          
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_GEOSW (Pyridoxal biosynthesis lyase pdxS OS=Geobacillus sp. (strain WCH70) GN=pdxS PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.999e-22
Identity = 58/124 (46.77%), Postives = 85/124 (68.55%), Query Frame = 1
Query:  262 RRFSPRYVTCSCWAFC*SADS*KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            R+F+  +V C C          ++LGEA RRI EGA+M+R +G+   +GNIVE V+++R +   IR + +M EDE+ T AK + AP +++ + K++GRLPVV FAAGG+ TPADAALMM +G +
Sbjct:  119 RQFTVPFV-CGC----------RDLGEASRRIAEGASMLRTKGEP-GTGNIVEAVRHMRKVNAQIRKVVSMSEDELVTEAKNLGAPVEVLREIKRLGRLPVVNFAAGGIATPADAALMMHLGAD 230          

HSP 2 Score: 72.7886 bits (177), Expect = 3.658e-12
Identity = 35/75 (46.67%), Postives = 55/75 (73.33%), Query Frame = 2
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQAKIAEAAGA ++M  E       +  G+ RM DP++++ V +AVS+PVM++ R+GH+VEA++LE +
Sbjct:   22 IMDVVNAEQAKIAEAAGAVAVMALERVPADIRAAGGVARMADPTVIEEVMKAVSIPVMAKARIGHYVEARVLEAL 96          
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_GEOTN (Pyridoxal biosynthesis lyase pdxS OS=Geobacillus thermodenitrificans (strain NG80-2) GN=pdxS PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 6.680e-22
Identity = 58/124 (46.77%), Postives = 85/124 (68.55%), Query Frame = 1
Query:  262 RRFSPRYVTCSCWAFC*SADS*KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            R+F+  +V C C          ++LGEA RRI EGA+M+R +G+   +GNIVE V+++R +   IR + +M EDE+   AK++ AP +++ + K++GRLPVV FAAGGV TPADAALMM +G +
Sbjct:  119 RQFTVPFV-CGC----------RDLGEAARRIAEGASMLRTKGEP-GTGNIVEAVRHMRKVNAQIRKVVSMSEDELVAEAKQLGAPVEVLREIKRIGRLPVVNFAAGGVATPADAALMMHLGAD 230          

HSP 2 Score: 73.9442 bits (180), Expect = 1.642e-12
Identity = 37/75 (49.33%), Postives = 55/75 (73.33%), Query Frame = 2
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQAKIAEAAGA ++M  E       +  G+ RM DP++V+ V  AVS+PVM++VR+GH+VEA++LE +
Sbjct:   22 IMDVVNAEQAKIAEAAGAVAVMALERVPADIRAAGGVARMADPTVVEEVMNAVSIPVMAKVRIGHYVEARVLEAL 96          
The following BLAST results are available for this feature:
BLAST of EY735088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
PDX1_STELP1.176e-2670.51Probable pyridoxal biosynthesis protein PDX1 (Frag... [more]
PDXS_METVA1.756e-2647.66Pyridoxal biosynthesis lyase pdxS (Fragment) OS=Me... [more]
PDXS_PICTO3.165e-2534.07Pyridoxal biosynthesis lyase pdxS OS=Picrophilus t... [more]
PDXS_ANOFW6.042e-2346.77Pyridoxal biosynthesis lyase pdxS OS=Anoxybacillus... [more]
PDXS_GEOKA1.346e-2247.58Pyridoxal biosynthesis lyase pdxS OS=Geobacillus k... [more]
PDXS_GEOSW2.999e-2246.77Pyridoxal biosynthesis lyase pdxS OS=Geobacillus s... [more]
PDXS_GEOTN6.680e-2246.77Pyridoxal biosynthesis lyase pdxS OS=Geobacillus t... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-082-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735088 ID=EY735088; Name=EY735088; organism=Citrus sinensis; type=EST; length=1026bp
ANAAGAAGGGACGAGGGGGGGGANTGAANNNNNCCCAAANNNNNAAAANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCCGACCCACGCGTCCGC
GGACGCGNNNTGGTCGGACGCGTGGGCATTGTTGAAGTCTCCAGTGTGGA
ACAAGCCAAGATCGCCGAAGCAGCTGGCGCCTGTTCTATCATGGTATCCG
AGCCCAGCCGGCCCGGCATTAAGCGCATGCCGGATCCTTCTCTTGTTAAA
AGCGTTAAACGCGCCGTTTCAGTCCCCGTTATGTCACGTGTTCGTGTTGG
GCATTTTGTTGAAGCGCAGATTCTTGAAAGAATCTTGGTGAAGCTTTGAG
GAGAATTAGAGAAGGAGCTGCTATGATAAGAATACAAGGGGATTTGTTAA
ATTCTGGTAATATTGTCGAGACTGTTAAAAATGTGAGGTCGTTAATGGGA
GATATTCGAATTTTGAATAACATGGATGAAGATGAGGTCTTCACGTTTGC
TAAGAAGATAGCGGCTCCGTATGATTTGGTGGCTCAAACTAAACAAATGG
GAAGGTTGCCCGTGGTGCAATTTGCTGCAGGAGGGGTTGTGACACCTGCT
GATGCCGCCCTGATGATGGCAGTGGGATGTGAATGGGGTGGTTGTGGGAA
TCGAGGTTTTTGAGTGCTCAAATCCGCACAAGGAAGTGGAGGGGGTATGG
GCGCCGCCTGTTAGGCCTAAAAACTGGACCCGCCGCGGCTCGGGGGGAAG
GGGCACGTGCGCGATAGCACGAACGCGCATTGCGGGGGAAGTCGCCGGGC
GGTGAGGAAGGAACCAGAAATGGAAGGTCGCAAAGAAGCGAGGTAACGGA
ATGAGCCCCCCATAAGGCCCCCTCCCGTCGCTCCTGCCCCCATCTCGCCC
CACNCTCGCCACCACAGGGCGGGCGCGGAGGCGCGGGCGGGCATGGCGTG
ACGCCGGGCCCCGGCGGTGCCGCCGTCGCGGGTGACCGGCCGCCGCGCCG
GACGCTCGCCTCGCGGTGGCGGAGGG
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