EY735088

Overview
NameEY735088
Unique NameEY735088
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_STRP2 (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=pdxS PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.473e-39
Identity = 54/102 (52.94%), Postives = 75/102 (73.53%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            K+LGEALRRI EGA+MIR +G+   +G+IV+ V+++R +  +IR + N+ EDE++  AK +  P +LV    + G+LPVV FAAGGV TPADAALMM +G E
Sbjct:  129 KDLGEALRRIAEGASMIRTKGEP-GTGDIVQAVRHMRMMNQEIRRIQNLREDELYVAAKDLQVPVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAE 229

HSP 2 Score: 78.9518 bits (193), Expect = 2.473e-39
Identity = 39/75 (52.00%), Postives = 55/75 (73.33%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IAEAAGA ++M  E       +  G+ RM DP ++K ++ AVS+PVM++VR+GHFVEAQILE I
Sbjct:   21 IMDVQNPEQARIAEAAGAAAVMALERIPADIRAAGGVSRMSDPKMIKEIQEAVSIPVMAKVRIGHFVEAQILEAI 95
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_BIFAA (Pyridoxal biosynthesis lyase pdxS OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=pdxS PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.222e-39
Identity = 55/102 (53.92%), Postives = 76/102 (74.51%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            KNLGEALRR+ EGA+MIR +G+   +G++++ V+++R++   IR L ++ +DEV+  AK++A PYDL       GRLPVV FAAGGV TPADAALMM +G E
Sbjct:  129 KNLGEALRRVAEGASMIRTKGEP-GTGDVIQAVRHMRTMNKQIRELVSLRDDEVYEAAKQLAVPYDLAKYVHDNGRLPVVNFAAGGVATPADAALMMELGAE 229

HSP 2 Score: 74.3294 bits (181), Expect = 3.222e-39
Identity = 35/75 (46.67%), Postives = 55/75 (73.33%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V++ EQAKIA+ AGAC++M  E       +  G+ RM DP+++K ++ AVS+PVM++VR+GH  EA+IL+ I
Sbjct:   21 IMDVTTPEQAKIAQDAGACAVMALERIPADIRAAGGVSRMSDPAMIKGIQEAVSIPVMAKVRIGHIAEARILQAI 95
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_BIFA0 (Pyridoxal biosynthesis lyase pdxS OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=pdxS PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.222e-39
Identity = 55/102 (53.92%), Postives = 76/102 (74.51%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            KNLGEALRRI EGA+MIR +G+   +G++++ V+++R++   IR L ++ +DEV+  AK++A PY+L       GRLPVV FAAGGV TPADAALMM +G E
Sbjct:  129 KNLGEALRRIEEGASMIRTKGEP-GTGDVIQAVRHMRTMTKQIRELASLRDDEVYEAAKQLAVPYELAKYVHDNGRLPVVNFAAGGVATPADAALMMELGAE 229

HSP 2 Score: 74.3294 bits (181), Expect = 3.222e-39
Identity = 35/75 (46.67%), Postives = 55/75 (73.33%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V++ EQA+IAE AGAC++M  E       +  G+ RM DP+++K ++ AVS+PVM++VR+GH  EA+IL+ I
Sbjct:   21 IMDVTTPEQARIAEDAGACAVMALERIPADIRAAGGVSRMSDPAMIKGIQEAVSIPVMAKVRIGHIAEARILQAI 95
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_CLOBL (Pyridoxal biosynthesis lyase pdxS OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=pdxS PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.198e-39
Identity = 51/102 (50.00%), Postives = 78/102 (76.47%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +NLGEALRRI EGA+MIR +G+   +GN+VE V+++R++  ++R L    ++E+ T AK++ AP++L+    + G+LPV+ FAAGG+ TPADAALMM +GC+
Sbjct:  128 RNLGEALRRIGEGASMIRTKGEA-GTGNVVEAVRHMRTISSEMRKLQLTPKEELMTVAKEMGAPFNLIEYVAEKGKLPVINFAAGGIATPADAALMMQLGCD 228

HSP 2 Score: 73.9442 bits (180), Expect = 4.198e-39
Identity = 40/75 (53.33%), Postives = 54/75 (72.00%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQAKIAE AGA ++M  E  PS    + G+ R  DP ++K +  AVS+PVM++VR+GHFVEAQILE I
Sbjct:   20 IMDVVNPEQAKIAEEAGAIAVMALERVPSDIRKQGGVARTSDPKMIKEIINAVSIPVMAKVRIGHFVEAQILEAI 94
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_DEIRA (Pyridoxal biosynthesis lyase pdxS OS=Deinococcus radiodurans GN=pdxS PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.465e-39
Identity = 56/102 (54.90%), Postives = 76/102 (74.51%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            KNLGEALRR+ EGA+MIR +G+   +GN+VE V++ R+++GDIR + +   +E+ T A+ + APYDLV      G+LPVV FAAGGV TPADAALMM +G +
Sbjct:  143 KNLGEALRRVGEGASMIRTKGEA-GTGNVVEAVRHARAVLGDIRAVQSRPAEELMTVARDLQAPYDLVQYVHAHGQLPVVNFAAGGVATPADAALMMQLGLD 243

HSP 2 Score: 70.0922 bits (170), Expect = 5.465e-39
Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + +QA+IAEAAGA ++M  E          G+ RM DP +++ +  AVS+PVM++VR+GH VEAQIL+ I
Sbjct:   35 IMDVVTADQARIAEAAGATAVMALERVPADIRKDGGVARMSDPKMIREIMAAVSIPVMAKVRIGHVVEAQILQAI 109
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_PROAC (Pyridoxal biosynthesis lyase pdxS OS=Propionibacterium acnes GN=pdxS PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.121e-39
Identity = 53/101 (52.48%), Postives = 76/101 (75.25%), Query Frame = 1 
Query:  331 NLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            NLGEALRRI EGAAMIR +G+   +G++ E V+++R++  ++  L++M  DE++  AK++ APYDLVA+  + G LPVV F AGGV TPADAAL+M +G +
Sbjct:  141 NLGEALRRITEGAAMIRSKGEA-GTGDVSEAVRHLRTIRAEMARLSSMSPDELYVAAKELQAPYDLVAEVARTGELPVVLFVAGGVATPADAALVMQMGAQ 240

HSP 2 Score: 75.8702 bits (185), Expect = 7.121e-39
Identity = 37/75 (49.33%), Postives = 54/75 (72.00%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQAKIAE AGAC++M  E       ++ G+ RM DP L++ +  AVS+PVM++ R+GHFVEAQ+LE +
Sbjct:   32 IMDVVTPEQAKIAEDAGACAVMALERVPADIRAQGGVARMSDPDLIEGIIEAVSIPVMAKARIGHFVEAQVLESL 106
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_HAEIN (Pyridoxal biosynthesis lyase pdxS OS=Haemophilus influenzae GN=pdxS PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 9.284e-39
Identity = 53/102 (51.96%), Postives = 75/102 (73.53%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            K+LGEALRRI EGA+MIR +G+   +G+IV+ V+++R +  +IR + N+ EDE++  AK +  P +LV    + G+LPVV FAAGG+ TPADAALMM +G E
Sbjct:  129 KDLGEALRRIAEGASMIRTKGEP-GTGDIVQAVRHMRMMSQEIRRIQNLREDELYVAAKDLQVPVELVQYVHKHGKLPVVNFAAGGIATPADAALMMQLGAE 229

HSP 2 Score: 77.411 bits (189), Expect = 9.284e-39
Identity = 39/75 (52.00%), Postives = 55/75 (73.33%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IAEAAGA ++M  E       +  G+ RM DP ++K ++ AVS+PVM++VR+GHFVEAQILE I
Sbjct:   21 IMDVQNPEQARIAEAAGAAAVMALERIPADIRAVGGVSRMSDPKMIKEIQGAVSIPVMAKVRIGHFVEAQILEAI 95
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_HAEIG (Pyridoxal biosynthesis lyase pdxS OS=Haemophilus influenzae (strain PittGG) GN=pdxS PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 9.284e-39
Identity = 53/102 (51.96%), Postives = 75/102 (73.53%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            K+LGEALRRI EGA+MIR +G+   +G+IV+ V+++R +  +IR + N+ EDE++  AK +  P +LV    + G+LPVV FAAGG+ TPADAALMM +G E
Sbjct:  129 KDLGEALRRIAEGASMIRTKGEP-GTGDIVQAVRHMRMMSQEIRRIQNLREDELYVAAKDLQVPVELVQYVHKNGKLPVVNFAAGGIATPADAALMMQLGAE 229

HSP 2 Score: 77.411 bits (189), Expect = 9.284e-39
Identity = 39/75 (52.00%), Postives = 55/75 (73.33%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IAEAAGA ++M  E       +  G+ RM DP ++K ++ AVS+PVM++VR+GHFVEAQILE I
Sbjct:   21 IMDVQNPEQARIAEAAGAAAVMALERIPADIRAVGGVSRMSDPKMIKEIQGAVSIPVMAKVRIGHFVEAQILEAI 95
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_HAEIE (Pyridoxal biosynthesis lyase pdxS OS=Haemophilus influenzae (strain PittEE) GN=pdxS PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 9.284e-39
Identity = 53/102 (51.96%), Postives = 75/102 (73.53%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            K+LGEALRRI EGA+MIR +G+   +G+IV+ V+++R +  +IR + N+ EDE++  AK +  P +LV    + G+LPVV FAAGG+ TPADAALMM +G E
Sbjct:  129 KDLGEALRRIAEGASMIRTKGEP-GTGDIVQAVRHMRMMSQEIRRIQNLREDELYVAAKDLQVPVELVQYVHKHGKLPVVNFAAGGIATPADAALMMQLGAE 229

HSP 2 Score: 77.411 bits (189), Expect = 9.284e-39
Identity = 39/75 (52.00%), Postives = 55/75 (73.33%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IAEAAGA ++M  E       +  G+ RM DP ++K ++ AVS+PVM++VR+GHFVEAQILE I
Sbjct:   21 IMDVQNPEQARIAEAAGAAAVMALERIPADIRAVGGVSRMSDPKMIKEIQGAVSIPVMAKVRIGHFVEAQILEAI 95
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_HAEI8 (Pyridoxal biosynthesis lyase pdxS OS=Haemophilus influenzae (strain 86-028NP) GN=pdxS PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 9.284e-39
Identity = 53/102 (51.96%), Postives = 75/102 (73.53%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            K+LGEALRRI EGA+MIR +G+   +G+IV+ V+++R +  +IR + N+ EDE++  AK +  P +LV    + G+LPVV FAAGG+ TPADAALMM +G E
Sbjct:  129 KDLGEALRRIAEGASMIRTKGEP-GTGDIVQAVRHMRMMSQEIRRIQNLREDELYVAAKDLQVPVELVQYVHKHGKLPVVNFAAGGIATPADAALMMQLGAE 229

HSP 2 Score: 77.411 bits (189), Expect = 9.284e-39
Identity = 39/75 (52.00%), Postives = 55/75 (73.33%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IAEAAGA ++M  E       +  G+ RM DP ++K ++ AVS+PVM++VR+GHFVEAQILE I
Sbjct:   21 IMDVQNPEQARIAEAAGAAAVMALERIPADIRAVGGVSRMSDPKMIKEIQGAVSIPVMAKVRIGHFVEAQILEAI 95
The following BLAST results are available for this feature:
BLAST of EY735088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
PDXS_STRP22.473e-3952.94Pyridoxal biosynthesis lyase pdxS OS=Streptococcus... [more]
PDXS_BIFAA3.222e-3953.92Pyridoxal biosynthesis lyase pdxS OS=Bifidobacteri... [more]
PDXS_BIFA03.222e-3953.92Pyridoxal biosynthesis lyase pdxS OS=Bifidobacteri... [more]
PDXS_CLOBL4.198e-3950.00Pyridoxal biosynthesis lyase pdxS OS=Clostridium b... [more]
PDXS_DEIRA5.465e-3954.90Pyridoxal biosynthesis lyase pdxS OS=Deinococcus r... [more]
PDXS_PROAC7.121e-3952.48Pyridoxal biosynthesis lyase pdxS OS=Propionibacte... [more]
PDXS_HAEIN9.284e-3951.96Pyridoxal biosynthesis lyase pdxS OS=Haemophilus i... [more]
PDXS_HAEIG9.284e-3951.96Pyridoxal biosynthesis lyase pdxS OS=Haemophilus i... [more]
PDXS_HAEIE9.284e-3951.96Pyridoxal biosynthesis lyase pdxS OS=Haemophilus i... [more]
PDXS_HAEI89.284e-3951.96Pyridoxal biosynthesis lyase pdxS OS=Haemophilus i... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-082-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735088 ID=EY735088; Name=EY735088; organism=Citrus sinensis; type=EST; length=1026bp
ANAAGAAGGGACGAGGGGGGGGANTGAANNNNNCCCAAANNNNNAAAANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCCGACCCACGCGTCCGC
GGACGCGNNNTGGTCGGACGCGTGGGCATTGTTGAAGTCTCCAGTGTGGA
ACAAGCCAAGATCGCCGAAGCAGCTGGCGCCTGTTCTATCATGGTATCCG
AGCCCAGCCGGCCCGGCATTAAGCGCATGCCGGATCCTTCTCTTGTTAAA
AGCGTTAAACGCGCCGTTTCAGTCCCCGTTATGTCACGTGTTCGTGTTGG
GCATTTTGTTGAAGCGCAGATTCTTGAAAGAATCTTGGTGAAGCTTTGAG
GAGAATTAGAGAAGGAGCTGCTATGATAAGAATACAAGGGGATTTGTTAA
ATTCTGGTAATATTGTCGAGACTGTTAAAAATGTGAGGTCGTTAATGGGA
GATATTCGAATTTTGAATAACATGGATGAAGATGAGGTCTTCACGTTTGC
TAAGAAGATAGCGGCTCCGTATGATTTGGTGGCTCAAACTAAACAAATGG
GAAGGTTGCCCGTGGTGCAATTTGCTGCAGGAGGGGTTGTGACACCTGCT
GATGCCGCCCTGATGATGGCAGTGGGATGTGAATGGGGTGGTTGTGGGAA
TCGAGGTTTTTGAGTGCTCAAATCCGCACAAGGAAGTGGAGGGGGTATGG
GCGCCGCCTGTTAGGCCTAAAAACTGGACCCGCCGCGGCTCGGGGGGAAG
GGGCACGTGCGCGATAGCACGAACGCGCATTGCGGGGGAAGTCGCCGGGC
GGTGAGGAAGGAACCAGAAATGGAAGGTCGCAAAGAAGCGAGGTAACGGA
ATGAGCCCCCCATAAGGCCCCCTCCCGTCGCTCCTGCCCCCATCTCGCCC
CACNCTCGCCACCACAGGGCGGGCGCGGAGGCGCGGGCGGGCATGGCGTG
ACGCCGGGCCCCGGCGGTGCCGCCGTCGCGGGTGACCGGCCGCCGCGCCG
GACGCTCGCCTCGCGGTGGCGGAGGG
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