EY735088

Overview
NameEY735088
Unique NameEY735088
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_BACHD (Pyridoxal biosynthesis lyase pdxS OS=Bacillus halodurans GN=pdxS PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 2.674e-38
Identity = 57/102 (55.88%), Postives = 75/102 (73.53%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            ++LGEA RRI EGA+MIR +G+   +GNIVE V+++R +   IR ++NM  DE+ T AK I APY+L+   K+ G LPVV FAAGGV TPADAALMM +G +
Sbjct:  130 RDLGEAARRIGEGASMIRTKGEP-GTGNIVEAVRHMRMMQAQIRKVSNMSTDELMTEAKNIGAPYELLLSIKETGELPVVNFAAGGVATPADAALMMQLGAD 230

HSP 2 Score: 69.3218 bits (168), Expect = 2.674e-38
Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQAKIAE AGA ++M  E       +  G+ RM DP++V+ V  AVS+PVM++ R+GH VEA++LE +
Sbjct:   22 IMDVVNAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKCRIGHIVEARVLEAL 96
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_BACCN (Pyridoxal biosynthesis lyase pdxS OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=pdxS PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.674e-38
Identity = 54/102 (52.94%), Postives = 79/102 (77.45%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +++GEA RRI EGA+M+R +G+   +GNIVE V+++R +  +IR + N+ EDE+ T+AK   APY+++ + K++GRLPVV FAAGGV TPADAALMM +G +
Sbjct:  131 RDIGEAARRIAEGASMLRTKGEP-GTGNIVEAVRHMRQVNAEIRQVANLREDELMTYAKNTGAPYEVLLEIKRLGRLPVVNFAAGGVATPADAALMMQLGAD 231

HSP 2 Score: 68.5514 bits (166), Expect = 2.674e-38
Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQAKIAE AGA ++M  E       +  G+ RM DP++V+ V  AVS+PVM++ R+GH VEA++LE +
Sbjct:   23 IMDVVNAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMGAVSIPVMAKCRIGHLVEARVLESL 97
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_MYCTU (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium tuberculosis GN=pdxS PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.537e-38
Identity = 54/101 (53.47%), Postives = 75/101 (74.26%), Query Frame = 1 
Query:  331 NLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            NLGEALRRI EGAAMIR +G+   +G++     ++R++ G+IR L +M EDE+F  AK++ APY+LVA+  + G+LPV  F AGG+ TPADAA+MM +G E
Sbjct:  136 NLGEALRRISEGAAMIRSKGEA-GTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPYELVAEVARAGKLPVTLFTAGGIATPADAAMMMQLGAE 235

HSP 2 Score: 70.4774 bits (171), Expect = 4.537e-38
Identity = 34/75 (45.33%), Postives = 54/75 (72.00%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IAE AGA ++M  E       ++ G+ RM DP +++ +  AV++PVM++VR+GHFVEAQIL+ +
Sbjct:   27 IMDVVTPEQARIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIAAVTIPVMAKVRIGHFVEAQILQTL 101
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_MYCTA (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=pdxS PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.537e-38
Identity = 54/101 (53.47%), Postives = 75/101 (74.26%), Query Frame = 1 
Query:  331 NLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            NLGEALRRI EGAAMIR +G+   +G++     ++R++ G+IR L +M EDE+F  AK++ APY+LVA+  + G+LPV  F AGG+ TPADAA+MM +G E
Sbjct:  136 NLGEALRRISEGAAMIRSKGEA-GTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPYELVAEVARAGKLPVTLFTAGGIATPADAAMMMQLGAE 235

HSP 2 Score: 70.4774 bits (171), Expect = 4.537e-38
Identity = 34/75 (45.33%), Postives = 54/75 (72.00%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IAE AGA ++M  E       ++ G+ RM DP +++ +  AV++PVM++VR+GHFVEAQIL+ +
Sbjct:   27 IMDVVTPEQARIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIAAVTIPVMAKVRIGHFVEAQILQTL 101
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_MYCBT (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=pdxS PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.537e-38
Identity = 54/101 (53.47%), Postives = 75/101 (74.26%), Query Frame = 1 
Query:  331 NLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            NLGEALRRI EGAAMIR +G+   +G++     ++R++ G+IR L +M EDE+F  AK++ APY+LVA+  + G+LPV  F AGG+ TPADAA+MM +G E
Sbjct:  136 NLGEALRRISEGAAMIRSKGEA-GTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPYELVAEVARAGKLPVTLFTAGGIATPADAAMMMQLGAE 235

HSP 2 Score: 70.4774 bits (171), Expect = 4.537e-38
Identity = 34/75 (45.33%), Postives = 54/75 (72.00%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IAE AGA ++M  E       ++ G+ RM DP +++ +  AV++PVM++VR+GHFVEAQIL+ +
Sbjct:   27 IMDVVTPEQARIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIAAVTIPVMAKVRIGHFVEAQILQTL 101
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_MYCBP (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=pdxS PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.537e-38
Identity = 54/101 (53.47%), Postives = 75/101 (74.26%), Query Frame = 1 
Query:  331 NLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            NLGEALRRI EGAAMIR +G+   +G++     ++R++ G+IR L +M EDE+F  AK++ APY+LVA+  + G+LPV  F AGG+ TPADAA+MM +G E
Sbjct:  136 NLGEALRRISEGAAMIRSKGEA-GTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPYELVAEVARAGKLPVTLFTAGGIATPADAAMMMQLGAE 235

HSP 2 Score: 70.4774 bits (171), Expect = 4.537e-38
Identity = 34/75 (45.33%), Postives = 54/75 (72.00%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IAE AGA ++M  E       ++ G+ RM DP +++ +  AV++PVM++VR+GHFVEAQIL+ +
Sbjct:   27 IMDVVTPEQARIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIAAVTIPVMAKVRIGHFVEAQILQTL 101
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_MYCBO (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium bovis GN=pdxS PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.537e-38
Identity = 54/101 (53.47%), Postives = 75/101 (74.26%), Query Frame = 1 
Query:  331 NLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            NLGEALRRI EGAAMIR +G+   +G++     ++R++ G+IR L +M EDE+F  AK++ APY+LVA+  + G+LPV  F AGG+ TPADAA+MM +G E
Sbjct:  136 NLGEALRRISEGAAMIRSKGEA-GTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPYELVAEVARAGKLPVTLFTAGGIATPADAAMMMQLGAE 235

HSP 2 Score: 70.4774 bits (171), Expect = 4.537e-38
Identity = 34/75 (45.33%), Postives = 54/75 (72.00%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IAE AGA ++M  E       ++ G+ RM DP +++ +  AV++PVM++VR+GHFVEAQIL+ +
Sbjct:   27 IMDVVTPEQARIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIAAVTIPVMAKVRIGHFVEAQILQTL 101
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_METLZ (Pyridoxal biosynthesis lyase pdxS OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=pdxS PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 4.539e-38
Identity = 49/102 (48.04%), Postives = 73/102 (71.57%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            ++LGEALRR+ EGA MIR +G+   +G+IV+ V+++R++  +IR + ++ +DE++  AK +  P  L+      G+LPVV FAAGGV TPADAALMM +G E
Sbjct:  129 RDLGEALRRVAEGATMIRTKGEA-GTGDIVQAVRHMRTMNSEIRRVVSLRQDELYVAAKDMQVPISLLQFVHDNGKLPVVNFAAGGVATPADAALMMQLGAE 229

HSP 2 Score: 82.8037 bits (203), Expect = 4.539e-38
Identity = 41/75 (54.67%), Postives = 56/75 (74.67%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V+S EQAKIAE AGAC++M  E       +  G+ RM DP ++K ++ AVS+PVM++VR+GHFVEAQILE I
Sbjct:   21 IMDVTSPEQAKIAEDAGACAVMALERIPADIRAAGGVSRMSDPKMIKGIQNAVSIPVMAKVRIGHFVEAQILEAI 95
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_LISIN (Pyridoxal biosynthesis lyase pdxS OS=Listeria innocua GN=pdxS PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.913e-38
Identity = 56/102 (54.90%), Postives = 77/102 (75.49%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +++GEALRRI EGAAM+R +G+   +GNIVE V+++R + G IR + +M +DE+   AK   APY+LV + K +G+LPVV FAAGGV TPADAALMM +G +
Sbjct:  131 RDIGEALRRIGEGAAMLRTKGEP-GTGNIVEAVRHMRQVNGQIRQIASMTDDELMVAAKNFGAPYELVKEIKTLGKLPVVNFAAGGVATPADAALMMELGAD 231

HSP 2 Score: 67.3958 bits (163), Expect = 5.913e-38
Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILE 328
            I++V + EQAKIAE AGA ++M  E  PS      G+ RM DP +V+ V  AVS+PVM++ R+GH  EA++LE
Sbjct:   23 IMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVMAKARIGHITEARVLE 95
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_LISMO (Pyridoxal biosynthesis lyase pdxS OS=Listeria monocytogenes GN=pdxS PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.913e-38
Identity = 55/102 (53.92%), Postives = 76/102 (74.51%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +++GEALRRI EGAAM+R +G+   +GNIVE V+++R + G IR +  M +DE+   AK   APY+L+ + K +G+LPVV FAAGGV TPADAALMM +G +
Sbjct:  131 RDIGEALRRIGEGAAMLRTKGEP-GTGNIVEAVRHMRQVNGQIRQIAGMTDDELMVAAKNFGAPYELIKEIKTLGKLPVVNFAAGGVATPADAALMMELGAD 231

HSP 2 Score: 68.1662 bits (165), Expect = 5.913e-38
Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILE 328
            I++V + EQAKIAE AGA ++M  E  PS      G+ RM DP +V+ V +AVS+PVM++ R+GH  EA++LE
Sbjct:   23 IMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMKAVSIPVMAKARIGHITEARVLE 95
The following BLAST results are available for this feature:
BLAST of EY735088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
PDXS_BACHD2.674e-3855.88Pyridoxal biosynthesis lyase pdxS OS=Bacillus halo... [more]
PDXS_BACCN2.674e-3852.94Pyridoxal biosynthesis lyase pdxS OS=Bacillus cere... [more]
PDXS_MYCTU4.537e-3853.47Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium... [more]
PDXS_MYCTA4.537e-3853.47Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium... [more]
PDXS_MYCBT4.537e-3853.47Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium... [more]
PDXS_MYCBP4.537e-3853.47Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium... [more]
PDXS_MYCBO4.537e-3853.47Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium... [more]
PDXS_METLZ4.539e-3848.04Pyridoxal biosynthesis lyase pdxS OS=Methanocorpus... [more]
PDXS_LISIN5.913e-3854.90Pyridoxal biosynthesis lyase pdxS OS=Listeria inno... [more]
PDXS_LISMO5.913e-3853.92Pyridoxal biosynthesis lyase pdxS OS=Listeria mono... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-082-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735088 ID=EY735088; Name=EY735088; organism=Citrus sinensis; type=EST; length=1026bp
ANAAGAAGGGACGAGGGGGGGGANTGAANNNNNCCCAAANNNNNAAAANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCCGACCCACGCGTCCGC
GGACGCGNNNTGGTCGGACGCGTGGGCATTGTTGAAGTCTCCAGTGTGGA
ACAAGCCAAGATCGCCGAAGCAGCTGGCGCCTGTTCTATCATGGTATCCG
AGCCCAGCCGGCCCGGCATTAAGCGCATGCCGGATCCTTCTCTTGTTAAA
AGCGTTAAACGCGCCGTTTCAGTCCCCGTTATGTCACGTGTTCGTGTTGG
GCATTTTGTTGAAGCGCAGATTCTTGAAAGAATCTTGGTGAAGCTTTGAG
GAGAATTAGAGAAGGAGCTGCTATGATAAGAATACAAGGGGATTTGTTAA
ATTCTGGTAATATTGTCGAGACTGTTAAAAATGTGAGGTCGTTAATGGGA
GATATTCGAATTTTGAATAACATGGATGAAGATGAGGTCTTCACGTTTGC
TAAGAAGATAGCGGCTCCGTATGATTTGGTGGCTCAAACTAAACAAATGG
GAAGGTTGCCCGTGGTGCAATTTGCTGCAGGAGGGGTTGTGACACCTGCT
GATGCCGCCCTGATGATGGCAGTGGGATGTGAATGGGGTGGTTGTGGGAA
TCGAGGTTTTTGAGTGCTCAAATCCGCACAAGGAAGTGGAGGGGGTATGG
GCGCCGCCTGTTAGGCCTAAAAACTGGACCCGCCGCGGCTCGGGGGGAAG
GGGCACGTGCGCGATAGCACGAACGCGCATTGCGGGGGAAGTCGCCGGGC
GGTGAGGAAGGAACCAGAAATGGAAGGTCGCAAAGAAGCGAGGTAACGGA
ATGAGCCCCCCATAAGGCCCCCTCCCGTCGCTCCTGCCCCCATCTCGCCC
CACNCTCGCCACCACAGGGCGGGCGCGGAGGCGCGGGCGGGCATGGCGTG
ACGCCGGGCCCCGGCGGTGCCGCCGTCGCGGGTGACCGGCCGCCGCGCCG
GACGCTCGCCTCGCGGTGGCGGAGGG
back to top