EY735088 | Citrus Genome Database

Overview


Name	EY735088
Unique Name	EY735088
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	1026

Libraries


Library Name	Type
Sweet orange fruit, development stadium (5 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_FRAT1 (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=pdxS PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.915e-38
Identity = 56/101 (55.45%), Postives = 71/101 (70.30%), Query Frame = 1

Query:  331 NLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            NLGEALRRI EGAA+IR +G+   +GNIVE V+ +R +  DI  + N D+ E+   AK + APYDLV    + G+LPV  F+AGGV TPADAALMM +G E
Sbjct:  128 NLGEALRRIGEGAALIRTKGEA-GTGNIVEAVRQLRQVNKDINYIKNADKSELMAIAKNLQAPYDLVTYVHKNGKLPVPNFSAGGVATPADAALMMQLGAE 227

HSP 2 Score: 70.0922 bits (170), Expect = 5.915e-38
Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = 2

Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IA+ AGA ++M  E          GI RM DP L+K +   VS+PVM++ R+GHFVEAQILE +
Sbjct:   19 IMDVVNAEQAEIAQQAGAVAVMALERVPADIRKDGGIARMSDPKLIKEIMSVVSIPVMAKARIGHFVEAQILESL 93

[Close]

BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_FRATU (Pyridoxal biosynthesis lyase pdxS (Fragment) OS=Francisella tularensis GN=pdxS PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.933e-38
Identity = 56/101 (55.45%), Postives = 71/101 (70.30%), Query Frame = 1

Query:  331 NLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            NLGEALRRI EGAA+IR +G+   +GNIVE V+ +R +  DI  + N D+ E+   AK + APYDLV    + G+LPV  F+AGGV TPADAALMM +G E
Sbjct:  128 NLGEALRRIGEGAALIRTKGEA-GTGNIVEAVRQLRQVNKDINYIKNADKSELMAIAKNLQAPYDLVTYVHKNGKLPVPNFSAGGVATPADAALMMQLGAE 227

HSP 2 Score: 70.0922 bits (170), Expect = 5.933e-38
Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = 2

Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IA+ AGA ++M  E          GI RM DP L+K +   VS+PVM++ R+GHFVEAQILE +
Sbjct:   19 IMDVVNAEQAEIAQQAGAVAVMALERVPADIRKDGGIARMSDPKLIKEIMSVVSIPVMAKARIGHFVEAQILESL 93

[Close]

BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_HAEDU (Pyridoxal biosynthesis lyase pdxS OS=Haemophilus ducreyi GN=pdxS PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.703e-38
Identity = 56/102 (54.90%), Postives = 78/102 (76.47%), Query Frame = 1

Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            ++LGEALRRI EGA+M+R +G+   +GNIVE V+++R +   +R + NM  DE+ T AK + AP++L+ Q KQ+G+LPVV FAAGGV TPADAALMM +G +
Sbjct:  131 RDLGEALRRIGEGASMLRTKGEP-GTGNIVEAVRHMRKVNSQVRKVVNMSTDELMTEAKILGAPFELLLQIKQLGKLPVVNFAAGGVATPADAALMMELGAD 231

HSP 2 Score: 67.781 bits (164), Expect = 7.703e-38
Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = 2

Query:  128 IVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILE 328
            I++V + EQA+IAEAAGA ++M  E  PS      G+ RM +P +VK V  AVS+PVM++ R+GH  EA++LE
Sbjct:   23 IMDVVNAEQARIAEAAGAVAVMALERVPSDIRAAGGVARMANPRIVKEVMEAVSIPVMAKARIGHITEARVLE 95

[Close]

BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_BACWK (Pyridoxal biosynthesis lyase pdxS OS=Bacillus weihenstephanensis (strain KBAB4) GN=pdxS PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.703e-38
Identity = 54/102 (52.94%), Postives = 79/102 (77.45%), Query Frame = 1

Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +++GEA RRI EGAAM+R +G+   +GNIVE V+++R +  +IR + ++ EDE+ T+AK   APY+++ + K++GRLPVV FAAGGV TPADAALMM +G +
Sbjct:  131 RDIGEAARRIAEGAAMLRTKGEP-GTGNIVEAVRHMRQVNAEIRQVASLREDELMTYAKNTGAPYEVLLEIKRLGRLPVVNFAAGGVATPADAALMMQLGAD 231

HSP 2 Score: 67.781 bits (164), Expect = 7.703e-38
Identity = 34/75 (45.33%), Postives = 52/75 (69.33%), Query Frame = 2

Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IAE AGA ++M  E       +  G+ RM DP++V+ V  AVS+PVM++ R+GH VEA++LE +
Sbjct:   23 IMDVVNAEQARIAEEAGAVAVMALERVPADIRAAGGVSRMADPTIVEEVMGAVSIPVMAKCRIGHLVEARVLESL 97

[Close]

BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_BACHK (Pyridoxal biosynthesis lyase pdxS OS=Bacillus thuringiensis subsp. konkukian GN=pdxS PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.703e-38
Identity = 53/102 (51.96%), Postives = 79/102 (77.45%), Query Frame = 1

Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +++GEA RRI EGA+M+R +G+   +GNIVE V+++R +  +IR + ++ EDE+ T+AK   APY+++ + K++GRLPVV FAAGGV TPADAALMM +G +
Sbjct:  131 RDIGEAARRIAEGASMLRTKGEP-GTGNIVEAVRHMRQVNAEIRQVASLREDELMTYAKNTGAPYEVLLEIKRLGRLPVVNFAAGGVATPADAALMMQLGAD 231