EY735088

Overview
NameEY735088
Unique NameEY735088
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_BACC3 (Pyridoxal biosynthesis lyase pdxS OS=Bacillus cereus (strain 03BB102) GN=pdxS PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.703e-38
Identity = 53/102 (51.96%), Postives = 79/102 (77.45%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +++GEA RRI EGA+M+R +G+   +GNIVE V+++R +  +IR + ++ EDE+ T+AK   APY+++ + K++GRLPVV FAAGGV TPADAALMM +G +
Sbjct:  131 RDIGEAARRIAEGASMLRTKGEP-GTGNIVEAVRHMRQVNAEIRQVASLREDELMTYAKNTGAPYEVLLEIKRLGRLPVVNFAAGGVATPADAALMMQLGAD 231

HSP 2 Score: 68.9366 bits (167), Expect = 7.703e-38
Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQAKIAE AGA ++M  E       +  G+ RM DP++V+ V  AVS+PVM++ R+GH VEA++LE +
Sbjct:   23 IMDVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVSRMADPTIVEEVMGAVSIPVMAKCRIGHLVEARVLESL 97
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_BACC2 (Pyridoxal biosynthesis lyase pdxS OS=Bacillus cereus (strain G9842) GN=pdxS PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.703e-38
Identity = 53/102 (51.96%), Postives = 79/102 (77.45%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +++GEA RRI EGA+M+R +G+   +GNIVE V+++R +  +IR + ++ EDE+ T+AK   APY+++ + K++GRLPVV FAAGGV TPADAALMM +G +
Sbjct:  131 RDIGEAARRIAEGASMLRTKGEP-GTGNIVEAVRHMRQVNAEIRQVASLREDELMTYAKNTGAPYEVLLEIKRLGRLPVVNFAAGGVATPADAALMMQLGAD 231

HSP 2 Score: 68.9366 bits (167), Expect = 7.703e-38
Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQAKIAE AGA ++M  E       +  G+ RM DP++V+ V  AVS+PVM++ R+GH VEA++LE +
Sbjct:   23 IMDVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVSRMADPTIVEEVMGAVSIPVMAKCRIGHLVEARVLESL 97
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_BACC1 (Pyridoxal biosynthesis lyase pdxS OS=Bacillus cereus (strain ATCC 10987) GN=pdxS PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.703e-38
Identity = 53/102 (51.96%), Postives = 79/102 (77.45%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +++GEA RRI EGA+M+R +G+   +GNIVE V+++R +  +IR + ++ EDE+ T+AK   APY+++ + K++GRLPVV FAAGGV TPADAALMM +G +
Sbjct:  131 RDIGEAARRIAEGASMLRTKGEP-GTGNIVEAVRHMRQVNAEIRQVASLREDELMTYAKNTGAPYEVLLEIKRLGRLPVVNFAAGGVATPADAALMMQLGAD 231

HSP 2 Score: 68.9366 bits (167), Expect = 7.703e-38
Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQAKIAE AGA ++M  E       +  G+ RM DP++V+ V  AVS+PVM++ R+GH VEA++LE +
Sbjct:   23 IMDVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVSRMADPTIVEEVMGAVSIPVMAKCRIGHLVEARVLESL 97
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_BACC0 (Pyridoxal biosynthesis lyase pdxS OS=Bacillus cereus (strain AH820) GN=pdxS PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.703e-38
Identity = 53/102 (51.96%), Postives = 79/102 (77.45%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +++GEA RRI EGA+M+R +G+   +GNIVE V+++R +  +IR + ++ EDE+ T+AK   APY+++ + K++GRLPVV FAAGGV TPADAALMM +G +
Sbjct:  131 RDIGEAARRIAEGASMLRTKGEP-GTGNIVEAVRHMRQVNAEIRQVASLREDELMTYAKNTGAPYEVLLEIKRLGRLPVVNFAAGGVATPADAALMMQLGAD 231

HSP 2 Score: 68.9366 bits (167), Expect = 7.703e-38
Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQAKIAE AGA ++M  E       +  G+ RM DP++V+ V  AVS+PVM++ R+GH VEA++LE +
Sbjct:   23 IMDVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVSRMADPTIVEEVMGAVSIPVMAKCRIGHLVEARVLESL 97
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_LISMH (Pyridoxal biosynthesis lyase pdxS OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=pdxS PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.004e-37
Identity = 55/102 (53.92%), Postives = 76/102 (74.51%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +++GEALRRI EGAAM+R +G+   +GNIVE V+++R + G IR +  M +DE+   AK   APY+L+ + K +G+LPVV FAAGGV TPADAALMM +G +
Sbjct:  131 RDIGEALRRIGEGAAMLRTKGEP-GTGNIVEAVRHMRQVNGQIRQIAGMTDDELMVAAKNFGAPYELIKEIKTLGKLPVVNFAAGGVATPADAALMMELGAD 231

HSP 2 Score: 67.3958 bits (163), Expect = 1.004e-37
Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILE 328
            I++V + EQAKIAE AGA ++M  E  PS      G+ RM DP +V+ V  AVS+PVM++ R+GH  EA++LE
Sbjct:   23 IMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVMAKARIGHITEARVLE 95
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_LISMF (Pyridoxal biosynthesis lyase pdxS OS=Listeria monocytogenes serotype 4b (strain F2365) GN=pdxS PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.004e-37
Identity = 55/102 (53.92%), Postives = 76/102 (74.51%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +++GEALRRI EGAAM+R +G+   +GNIVE V+++R + G IR +  M +DE+   AK   APY+L+ + K +G+LPVV FAAGGV TPADAALMM +G +
Sbjct:  131 RDIGEALRRIGEGAAMLRTKGEP-GTGNIVEAVRHMRQVNGQIRQIAGMTDDELMVAAKNFGAPYELIKEIKTLGKLPVVNFAAGGVATPADAALMMELGAD 231

HSP 2 Score: 67.3958 bits (163), Expect = 1.004e-37
Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILE 328
            I++V + EQAKIAE AGA ++M  E  PS      G+ RM DP +V+ V  AVS+PVM++ R+GH  EA++LE
Sbjct:   23 IMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVMAKARIGHITEARVLE 95
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_LISMC (Pyridoxal biosynthesis lyase pdxS OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=pdxS PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.004e-37
Identity = 55/102 (53.92%), Postives = 76/102 (74.51%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +++GEALRRI EGAAM+R +G+   +GNIVE V+++R + G IR +  M +DE+   AK   APY+L+ + K +G+LPVV FAAGGV TPADAALMM +G +
Sbjct:  131 RDIGEALRRIGEGAAMLRTKGEP-GTGNIVEAVRHMRQVNGQIRQIAGMTDDELMVAAKNFGAPYELIKEIKTLGKLPVVNFAAGGVATPADAALMMELGAD 231

HSP 2 Score: 67.3958 bits (163), Expect = 1.004e-37
Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILE 328
            I++V + EQAKIAE AGA ++M  E  PS      G+ RM DP +V+ V  AVS+PVM++ R+GH  EA++LE
Sbjct:   23 IMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVMAKARIGHITEARVLE 95
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_THEP1 (Pyridoxal biosynthesis lyase pdxS OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=pdxS PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.307e-37
Identity = 55/102 (53.92%), Postives = 79/102 (77.45%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            ++LGEALRRI EGAAMIR +G+   +GN+VE VK++R +M  I+ +  M+++E+  + K+I AP +L+ + K++GRLPVV FAAGGV TPADAALMM +G +
Sbjct:  131 RDLGEALRRIAEGAAMIRTKGEA-GTGNVVEAVKHMRRMMEQIKQVTKMEDEELVAYGKEIGAPVELLREVKRLGRLPVVNFAAGGVATPADAALMMMLGAD 231

HSP 2 Score: 64.6994 bits (156), Expect = 1.307e-37
Identity = 33/75 (44.00%), Postives = 49/75 (65.33%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V+S EQAKIAE AGA ++M  E          G+ RM   + ++ +  AVS+PVM++VR+GH  EA+ILE +
Sbjct:   23 IMDVTSAEQAKIAEEAGAVAVMALERVPADIRKEGGVARMASIAKIREIMEAVSIPVMAKVRIGHIAEAKILEEL 97
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_STAAW (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus aureus (strain MW2) GN=pdxS PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.307e-37
Identity = 57/102 (55.88%), Postives = 76/102 (74.51%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +NLGEA RRI EGAAM+R +G+   +GNIVE V+++R +  ++  L  M++DE+ TFAK I APY+++ Q K  GRLPVV FAAGGV TP DAALMM +G +
Sbjct:  131 RNLGEAARRIGEGAAMLRTKGEP-GTGNIVEAVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPYEILKQIKDNGRLPVVNFAAGGVATPQDAALMMELGAD 231

HSP 2 Score: 64.6994 bits (156), Expect = 1.307e-37
Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILE 328
            I++V + EQA+IAE AGA ++M  E  PS      G+ RM +P +V+ V  AVS+PVM++ R+GH  EA++LE
Sbjct:   23 IMDVVNAEQARIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVMAKARIGHITEARVLE 95
[Close]
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_STAAT (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=pdxS PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.307e-37
Identity = 57/102 (55.88%), Postives = 76/102 (74.51%), Query Frame = 1 
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +NLGEA RRI EGAAM+R +G+   +GNIVE V+++R +  ++  L  M++DE+ TFAK I APY+++ Q K  GRLPVV FAAGGV TP DAALMM +G +
Sbjct:  131 RNLGEAARRIGEGAAMLRTKGEP-GTGNIVEAVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPYEILKQIKDNGRLPVVNFAAGGVATPQDAALMMELGAD 231

HSP 2 Score: 64.6994 bits (156), Expect = 1.307e-37
Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 2 
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILE 328
            I++V + EQA+IAE AGA ++M  E  PS      G+ RM +P +V+ V  AVS+PVM++ R+GH  EA++LE
Sbjct:   23 IMDVVNAEQARIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVMAKARIGHITEARVLE 95
The following BLAST results are available for this feature:
BLAST of EY735088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
PDXS_BACC37.703e-3851.96Pyridoxal biosynthesis lyase pdxS OS=Bacillus cere... [more]
PDXS_BACC27.703e-3851.96Pyridoxal biosynthesis lyase pdxS OS=Bacillus cere... [more]
PDXS_BACC17.703e-3851.96Pyridoxal biosynthesis lyase pdxS OS=Bacillus cere... [more]
PDXS_BACC07.703e-3851.96Pyridoxal biosynthesis lyase pdxS OS=Bacillus cere... [more]
PDXS_LISMH1.004e-3753.92Pyridoxal biosynthesis lyase pdxS OS=Listeria mono... [more]
PDXS_LISMF1.004e-3753.92Pyridoxal biosynthesis lyase pdxS OS=Listeria mono... [more]
PDXS_LISMC1.004e-3753.92Pyridoxal biosynthesis lyase pdxS OS=Listeria mono... [more]
PDXS_THEP11.307e-3753.92Pyridoxal biosynthesis lyase pdxS OS=Thermotoga pe... [more]
PDXS_STAAW1.307e-3755.88Pyridoxal biosynthesis lyase pdxS OS=Staphylococcu... [more]
PDXS_STAAT1.307e-3755.88Pyridoxal biosynthesis lyase pdxS OS=Staphylococcu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-082-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735088 ID=EY735088; Name=EY735088; organism=Citrus sinensis; type=EST; length=1026bp
ANAAGAAGGGACGAGGGGGGGGANTGAANNNNNCCCAAANNNNNAAAANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCCGACCCACGCGTCCGC
GGACGCGNNNTGGTCGGACGCGTGGGCATTGTTGAAGTCTCCAGTGTGGA
ACAAGCCAAGATCGCCGAAGCAGCTGGCGCCTGTTCTATCATGGTATCCG
AGCCCAGCCGGCCCGGCATTAAGCGCATGCCGGATCCTTCTCTTGTTAAA
AGCGTTAAACGCGCCGTTTCAGTCCCCGTTATGTCACGTGTTCGTGTTGG
GCATTTTGTTGAAGCGCAGATTCTTGAAAGAATCTTGGTGAAGCTTTGAG
GAGAATTAGAGAAGGAGCTGCTATGATAAGAATACAAGGGGATTTGTTAA
ATTCTGGTAATATTGTCGAGACTGTTAAAAATGTGAGGTCGTTAATGGGA
GATATTCGAATTTTGAATAACATGGATGAAGATGAGGTCTTCACGTTTGC
TAAGAAGATAGCGGCTCCGTATGATTTGGTGGCTCAAACTAAACAAATGG
GAAGGTTGCCCGTGGTGCAATTTGCTGCAGGAGGGGTTGTGACACCTGCT
GATGCCGCCCTGATGATGGCAGTGGGATGTGAATGGGGTGGTTGTGGGAA
TCGAGGTTTTTGAGTGCTCAAATCCGCACAAGGAAGTGGAGGGGGTATGG
GCGCCGCCTGTTAGGCCTAAAAACTGGACCCGCCGCGGCTCGGGGGGAAG
GGGCACGTGCGCGATAGCACGAACGCGCATTGCGGGGGAAGTCGCCGGGC
GGTGAGGAAGGAACCAGAAATGGAAGGTCGCAAAGAAGCGAGGTAACGGA
ATGAGCCCCCCATAAGGCCCCCTCCCGTCGCTCCTGCCCCCATCTCGCCC
CACNCTCGCCACCACAGGGCGGGCGCGGAGGCGCGGGCGGGCATGGCGTG
ACGCCGGGCCCCGGCGGTGCCGCCGTCGCGGGTGACCGGCCGCCGCGCCG
GACGCTCGCCTCGCGGTGGCGGAGGG
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