EY735032
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735032 vs. ExPASy Swiss-Prot
Match: CNG_ICTPU (Cyclic nucleotide-gated cation channel OS=Ictalurus punctatus PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.081e-11 Identity = 43/177 (24.29%), Postives = 85/177 (48.02%), Query Frame = 2 Query: 14 FSHCFRWGLRNLSCFGQNLQTSSNAWENFFVILVTISGLVLMLFLIGNIQIYLQTKATRPKEMTLRMQEMNEHMPIQKLSRSVQQQLKIYQRYIWRKPDTIDVESSLSILPKELRRNIKRELCLDLLKNVKEFKTLDEEVLDALCDCVKPAFYFKHTHIVLEGDPIYEMLFIVQGKM 544 + +CF W L+ G+ + E FV+ + G+++ ++GN+ + E R+ + +M +K++R+++ ++ + Y+W T+D + L LP +LR I + LD LK V+ F+ + +L L ++P Y +I +GD EM I +G++ Sbjct: 317 YVYCFYWSTLTLTTIGE-MPPPVKDEEYVFVVFDFLVGVLIFATIVGNVGSMIANMNATRAEFQTRIDAIKHYMHFRKVNRTLETRVIKWFDYLWTNKKTVDEQEVLKNLPDKLRAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLRPQVYSPGDYICRKGDIGKEMYIIKEGQL 492
BLAST of EY735032 vs. ExPASy Swiss-Prot
Match: CNGA1_BOVIN (cGMP-gated cation channel alpha-1 OS=Bos taurus GN=CNGA1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.412e-11 Identity = 44/179 (24.58%), Postives = 85/179 (47.49%), Query Frame = 2 Query: 8 QKFSHCFRWGLRNLSCFGQNLQTSSNAWENFFVILVTISGLVLMLFLIGNIQIYLQTKATRPKEMTLRMQEMNEHMPIQKLSRSVQQQLKIYQRYIWRKPDTIDVESSLSILPKELRRNIKRELCLDLLKNVKEFKTLDEEVLDALCDCVKPAFYFKHTHIVLEGDPIYEMLFIVQGKM 544 +K+ + W L+ G+ ++ E FFV+ + G+++ ++GNI + E R+ + ++M + +S+ +++++ + Y+W T+D L LP +LR I + LD LK V+ F + +L L ++P Y +I +GD EM I +GK+ Sbjct: 345 RKYVYSLYWSTLTLTTIGETPPPVRDS-EYFFVVADFLIGVLIFATIVGNIGSMISNMNAARAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKTVDEREVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKL 522
BLAST of EY735032 vs. ExPASy Swiss-Prot
Match: CNG_DROME (Cyclic nucleotide-gated cation channel OS=Drosophila melanogaster GN=Cng PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.409e-11 Identity = 42/179 (23.46%), Postives = 87/179 (48.60%), Query Frame = 2 Query: 8 QKFSHCFRWGLRNLSCFGQNLQTSSNAWENFFVILVTISGLVLMLFLIGNIQIYLQTKATRPKEMTLRMQEMNEHMPIQKLSRSVQQQLKIYQRYIWRKPDTIDVESSLSILPKELRRNIKRELCLDLLKNVKEFKTLDEEVLDALCDCVKPAFYFKHTHIVLEGDPIYEMLFIVQGKM 544 +++ + F W L+ G+ T N E FV+ ++G+++ ++GNI + E RM + ++M +++ ++ ++ + Y W + +D E L+ LP +L+ I ++ +D LK V+ F + +L+AL +K + +I +GD EM + +GK+ Sbjct: 297 RQYIYSFYWSTLTLTTIGET-PTPENDVEYLFVVADFLAGVLIFATIVGNIGSMISNMNVARVEFQNRMDGVKQYMAFRRVGHELEARVIRWFAYTWSQSGALDEERVLAALPDKLKAEIAIQVHMDTLKQVRIFHDTEPGLLEALVLKLKLQVFSPGDYICRKGDVGKEMYIVKRGKL 474
BLAST of EY735032 vs. ExPASy Swiss-Prot
Match: CNGA1_HUMAN (cGMP-gated cation channel alpha-1 OS=Homo sapiens GN=CNGA1 PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 4.109e-11 Identity = 43/179 (24.02%), Postives = 86/179 (48.04%), Query Frame = 2 Query: 8 QKFSHCFRWGLRNLSCFGQNLQTSSNAWENFFVILVTISGLVLMLFLIGNIQIYLQTKATRPKEMTLRMQEMNEHMPIQKLSRSVQQQLKIYQRYIWRKPDTIDVESSLSILPKELRRNIKRELCLDLLKNVKEFKTLDEEVLDALCDCVKPAFYFKHTHIVLEGDPIYEMLFIVQGKM 544 +K+ + W L+ G+ ++ E FV++ + G+++ ++GNI + E R+ + ++M + +S+ +++++ + Y+W T+D + L LP +LR I + LD LK V+ F + +L L ++P Y +I +GD EM I +GK+ Sbjct: 347 RKYVYSLYWSTLTLTTIGETPPPVRDS-EYVFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKTVDEKEVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKL 524
BLAST of EY735032 vs. ExPASy Swiss-Prot
Match: CNGA1_CANFA (cGMP-gated cation channel alpha-1 OS=Canis familiaris GN=CNGA1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.109e-11 Identity = 43/179 (24.02%), Postives = 86/179 (48.04%), Query Frame = 2 Query: 8 QKFSHCFRWGLRNLSCFGQNLQTSSNAWENFFVILVTISGLVLMLFLIGNIQIYLQTKATRPKEMTLRMQEMNEHMPIQKLSRSVQQQLKIYQRYIWRKPDTIDVESSLSILPKELRRNIKRELCLDLLKNVKEFKTLDEEVLDALCDCVKPAFYFKHTHIVLEGDPIYEMLFIVQGKM 544 +K+ + W L+ G+ ++ E FV++ + G+++ ++GNI + E R+ + ++M + +S+ +++++ + Y+W T+D + L LP +LR I + LD LK V+ F + +L L ++P Y +I +GD EM I +GK+ Sbjct: 346 RKYVYSLYWSTLTLTTIGETPPPVRDS-EYVFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKTVDEKEVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKL 523
BLAST of EY735032 vs. ExPASy Swiss-Prot
Match: CNGA1_MOUSE (cGMP-gated cation channel alpha-1 OS=Mus musculus GN=Cnga1 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 9.153e-11 Identity = 43/179 (24.02%), Postives = 85/179 (47.49%), Query Frame = 2 Query: 8 QKFSHCFRWGLRNLSCFGQNLQTSSNAWENFFVILVTISGLVLMLFLIGNIQIYLQTKATRPKEMTLRMQEMNEHMPIQKLSRSVQQQLKIYQRYIWRKPDTIDVESSLSILPKELRRNIKRELCLDLLKNVKEFKTLDEEVLDALCDCVKPAFYFKHTHIVLEGDPIYEMLFIVQGKM 544 +K+ + W L+ G+ ++ E FV++ + G+++ ++GNI + E R+ + ++M + +S+ +++++ + Y+W T+D L LP +LR I + LD LK V+ F + +L L ++P Y +I +GD EM I +GK+ Sbjct: 339 RKYVYSLYWSTLTLTTIGETPPPVLDS-EYIFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQSRVDAIKQYMNFRNVSKDMEKRVIKWFDYLWTNKKTVDEREVLRYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKL 516 The following BLAST results are available for this feature:
BLAST of EY735032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY735032 ID=EY735032; Name=EY735032; organism=Citrus sinensis; type=EST; length=866bpback to top |