EY735009

Overview
NameEY735009
Unique NameEY735009
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735009 vs. ExPASy Swiss-Prot
Match: POTA_DESVH (Spermidine/putrescine import ATP-binding protein potA OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=potA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.569e-14
Identity = 41/122 (33.61%), Postives = 71/122 (58.20%), Query Frame = -2
Query:   10 VLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHP---RVAVAFQDPSLLPWLSLEKNVAFGLDFARQQRLSPEERRNRVDPGIRTV 366
            ++  +G+   +     L+  DL+++ GE +++LGPSG GK+++LR+++G + P  G I L G+ ++   P   +V   FQ+ +L P +S+ +NV FGL   R QR   +E   RV   +R V
Sbjct:    7 IIELRGVTKNFEDTCALDNIDLEIRNGEFLTLLGPSGCGKTTILRLISGFEKPDAGVITLKGQRMDDAPPEARQVNTVFQNYALFPHMSVRENVGFGL---RMQRRPKDEIARRVHDALRMV 125          
BLAST of EY735009 vs. ExPASy Swiss-Prot
Match: TAUB1_BURXL (Taurine import ATP-binding protein tauB 1 OS=Burkholderia xenovorans (strain LB400) GN=tauB1 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.967e-14
Identity = 47/120 (39.17%), Postives = 64/120 (53.33%), Query Frame = -2
Query:   31 SGQSMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARQQRLSPEERRNRV 390
            SG  + Q  +  +G   G   +  L   DL+++PGE V  LG SG GK++LL  +AG   P  G + L GEP+ GP     V FQ  +L+PWL +  NVA GL F R     P+  R R+
Sbjct:    2 SGLEIRQLQVAYEG-ARGAAPHVALADVDLRIEPGEFVVALGASGCGKTTLLNCIAGFIQPTEGEVRLNGEPVLGPGADRGVVFQKYALMPWLDVLDNVALGLRFQR----VPKAERERI 116          
BLAST of EY735009 vs. ExPASy Swiss-Prot
Match: SSUB1_RHOSR (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Rhodococcus sp. (strain RHA1) GN=ssuB1 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.793e-14
Identity = 43/98 (43.88%), Postives = 57/98 (58.16%), Query Frame = -2
Query:   58 GICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARQQRL 351
            GI   Y   +VL   DL ++PGE VS LGPSGVGKS+LLR++AGL+ P  G +   G    G   R  + FQ+  LLPW ++  NV  G    R++ L
Sbjct:   13 GIGHRYRDTTVLHDIDLTVEPGEFVSFLGPSGVGKSTLLRIIAGLEQPTHGVVESTGGTSGGTMSR--MMFQEDRLLPWRNVLDNVQLGTRHQRERAL 108          
BLAST of EY735009 vs. ExPASy Swiss-Prot
Match: NRTC_SYNE7 (Nitrate transport ATP-binding protein nrtC OS=Synechococcus elongatus (strain PCC 7942) GN=nrtC PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.793e-14
Identity = 40/99 (40.40%), Postives = 56/99 (56.57%), Query Frame = -2
Query:   43 GYGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARQQRLSPEER 339
            G G    L+   L ++PGE +S++G SG GKS+LL ++AGL  P  G I L G  +  P P   V FQ+ SLLPW ++ +N+A  +D     R   E R
Sbjct:   18 GGGQYIALKDVSLNIRPGEFISLIGHSGCGKSTLLNLIAGLAQPSSGGIILEGRQVTEPGPDRMVVFQNYSLLPWRTVRQNIALAVDSVLHDRNRTERR 116          
BLAST of EY735009 vs. ExPASy Swiss-Prot
Match: FBPC_ACTPL (Fe(3+) ions import ATP-binding protein fbpC OS=Actinobacillus pleuropneumoniae GN=fbpC PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.793e-14
Identity = 44/126 (34.92%), Postives = 73/126 (57.94%), Query Frame = -2
Query:   10 MSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNG---PHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARQQRLSPEERRNRVDPGIRTV 378
            M+   L  + I   +G  +V++  DL ++ G +V++LGPSG GK+++LR++AGL+ P  G I + GE +      +  + + FQ  +L P +S+  NV +GL   R Q +S EER+ RV   +  V
Sbjct:    1 MNNDFLVLKNITKSFGKATVIDNLDLVIKRGTMVTLLGPSGCGKTTVLRLVAGLENPTSGQIFIDGEDVTKSSIQNRDICIVFQSYALFPHMSIGDNVGYGL---RMQGVSNEERKQRVKEALELV 123          
BLAST of EY735009 vs. ExPASy Swiss-Prot
Match: AGLK_RHIME (Alpha-glucoside transport ATP-binding protein aglK OS=Rhizobium meliloti GN=aglK PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 7.793e-14
Identity = 40/101 (39.60%), Postives = 62/101 (61.39%), Query Frame = -2
Query:   43 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPR---VAVAFQDPSLLPWLSLEKNVAFGLDFARQQRLSPEER 336
            YG   V+ G DL ++ GE V  +GPSG GKS+LLR++AGL+   GG + + GE +N   P    +A+ FQ  +L P +++  N+AFG+  AR+ +   + R
Sbjct:   13 YGAVDVIHGIDLDIKEGEFVVFVGPSGCGKSTLLRMIAGLEEITGGDMFIDGERVNDVPPSKRGIAMVFQSYALYPHMTVYDNMAFGMRIARESKEEIDRR 113          
BLAST of EY735009 vs. ExPASy Swiss-Prot
Match: Y4FO_RHISN (Uncharacterized ABC transporter ATP-binding protein y4fO OS=Rhizobium sp. (strain NGR234) GN=NGR_a03670 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.329e-13
Identity = 43/121 (35.54%), Postives = 69/121 (57.02%), Query Frame = -2
Query:   31 QSMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHP---RVAVAFQDPSLLPWLSLEKNVAFGLDFARQQRLSPEERRNRV 384
            ++M+ +VL    + +G+ G +V+   +L +  G  VS+LGPSG GKSS+LR +AGL    GG + L G+ +    P    V + FQ+ +L P +S  +N+AF L  A++ +   E R   V
Sbjct:    6 RAMADSVLSLNKLDVGFPGMTVVRDLNLDVADGAFVSLLGPSGSGKSSVLRTIAGLLPALGGRVLLEGQDITALPPERRNVGIVFQNYALFPTMSAFENIAFALRVAKKSKAEVERRVGEV 126          
BLAST of EY735009 vs. ExPASy Swiss-Prot
Match: UGPC_RALME (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=ugpC PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.329e-13
Identity = 39/100 (39.00%), Postives = 62/100 (62.00%), Query Frame = -2
Query:   43 GGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPR---VAVAFQDPSLLPWLSLEKNVAFGLDFARQQRLSPEER 333
            GG  V+ G D+++  GE + I+GPSG GKS+LLR++AGL+   GG IH+  + +N   P    +A+ FQ+ +L P +S+  N+A+GL      +   E+R
Sbjct:   15 GGTQVVHGIDMEIADGEFIVIVGPSGCGKSTLLRMVAGLETITGGEIHIGDKVVNDLEPAARDIAMVFQNYALYPHMSVYDNMAYGLKIRGMSKGEIEQR 114          
BLAST of EY735009 vs. ExPASy Swiss-Prot
Match: CMPD_SYNP6 (Bicarbonate transport ATP-binding protein cmpD OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=cmpD PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.329e-13
Identity = 37/97 (38.14%), Postives = 59/97 (60.82%), Query Frame = -2
Query:   43 GGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARQQRLSPEER 333
            G  +VL+G +L +Q GE + ++G SG GKS+LL +++G   P  GS+ L G+ ++ P P   V FQ+ +LLPW++  +NV   +D    Q    E+R
Sbjct:   35 GPYTVLDGVNLTVQEGEFICVIGHSGCGKSTLLNMVSGFNQPSHGSVRLKGKEIDRPGPDRMVVFQNYALLPWMTAYENVYLAVDCVNPQMREGEKR 131          
BLAST of EY735009 vs. ExPASy Swiss-Prot
Match: CMPD_SYNE7 (Bicarbonate transport ATP-binding protein cmpD OS=Synechococcus elongatus (strain PCC 7942) GN=cmpD PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.329e-13
Identity = 37/97 (38.14%), Postives = 59/97 (60.82%), Query Frame = -2
Query:   43 GGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARQQRLSPEER 333
            G  +VL+G +L +Q GE + ++G SG GKS+LL +++G   P  GS+ L G+ ++ P P   V FQ+ +LLPW++  +NV   +D    Q    E+R
Sbjct:   35 GPYTVLDGVNLTVQEGEFICVIGHSGCGKSTLLNMVSGFNQPSHGSVRLKGKEIDRPGPDRMVVFQNYALLPWMTAYENVYLAVDCVNPQMREGEKR 131          
The following BLAST results are available for this feature:
BLAST of EY735009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
POTA_DESVH4.569e-1433.61Spermidine/putrescine import ATP-binding protein p... [more]
TAUB1_BURXL5.967e-1439.17Taurine import ATP-binding protein tauB 1 OS=Burkh... [more]
SSUB1_RHOSR7.793e-1443.88Aliphatic sulfonates import ATP-binding protein ss... [more]
NRTC_SYNE77.793e-1440.40Nitrate transport ATP-binding protein nrtC OS=Syne... [more]
FBPC_ACTPL7.793e-1434.92Fe(3+) ions import ATP-binding protein fbpC OS=Act... [more]
AGLK_RHIME7.793e-1439.60Alpha-glucoside transport ATP-binding protein aglK... [more]
Y4FO_RHISN1.329e-1335.54Uncharacterized ABC transporter ATP-binding protei... [more]
UGPC_RALME1.329e-1339.00sn-glycerol-3-phosphate import ATP-binding protein... [more]
CMPD_SYNP61.329e-1338.14Bicarbonate transport ATP-binding protein cmpD OS=... [more]
CMPD_SYNE71.329e-1338.14Bicarbonate transport ATP-binding protein cmpD OS=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-075-C06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735009 ID=EY735009; Name=EY735009; organism=Citrus sinensis; type=EST; length=595bp
GACCTGCAGTACGGTCCGGATTCCCGGGTCGACCCGGTTGCGTCGTTCTT
CAGGACTGAGGCGCTGTTGGCGGGCAAAGTCCAGGCCGAAGGCGACGTTC
TTTTCCAGGCTCAACCACGGCAACAGGCTGGGGTCCTGGAACGCCACCGC
CACCCGCGGATGCGGGCCATTCAACGGCTCGCCCAGCAGGTGAATGCTGC
CGCCCTGGGGCGCCTGCAAACCGGCAAGCACCCGCAGCAGGCTGGACTTG
CCAACGCCGCTGGGGCCGAGGATCGACACCACTTCGCCGGGCTGCAATTG
CAGGTCGAACCCTTCCAGCACCGAGTTGCCCCCATAGCCCAGGCAAATTC
CCTGGGCATGCAGTACCGCCTGGCTCATAGATTGGCCTGACGGTTCAACT
CGGTGCGCAACTGCACCAAGCTCGGGGTCACGATCGGCACAAACGCCGAC
TCGCGCCAACGCCGGGCGAAACCGCTGCCGTGGGCAGTCAGGTAGGCCTT
GCCACCGCTGGCTTGCAGCTCCAGTTGGACGGCGCTGGCGGCAATTTCCG
CGAGAGCAATGCGCAGGCGGAACAACGGTAACGGCTCGGTCCCGA
back to top