EY735009

Overview
NameEY735009
Unique NameEY735009
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735009 vs. ExPASy Swiss-Prot
Match: UGPC2_RHIEC (sn-glycerol-3-phosphate import ATP-binding protein ugpC 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ugpC2 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.736e-13
Identity = 42/105 (40.00%), Postives = 65/105 (61.90%), Query Frame = -2
Query:   31 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPR---VAVAFQDPSLLPWLSLEKNVAFGLDFARQQRLSPEERRNRV 336
            YG + V+ G DL++Q GE + ILGPSG GKS+LLR++AGL+   GG I + G  +N   PR    A+ FQ+ +L P +++ +N+ + L  A    ++  ER  R+
Sbjct:   13 YGKHPVVHGVDLEIQSGEFIVILGPSGCGKSTLLRMIAGLEEITGGEIAIDGRVVNQMEPRERGCAMVFQNYALYPHMTVAENIGYALKVA---GVAKTERSRRI 114          
BLAST of EY735009 vs. ExPASy Swiss-Prot
Match: POTA_VIBF1 (Spermidine/putrescine import ATP-binding protein potA OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=potA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.736e-13
Identity = 45/128 (35.16%), Postives = 70/128 (54.69%), Query Frame = -2
Query:   10 QSMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLN---GPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARQQRLSPEERRNRVDPGIRTV 384
            QS  +AV+   GI   + G  V+  FDL +  GE ++ILGPSG GK+++LR++AG +    G+I L    +         V   FQ  +L P +++ +NVAFGL   R Q+++  E   RV   ++ V
Sbjct:    6 QSEKEAVIKLTGISKSFDGKEVISNFDLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADAGTILLDSTDVTSVPAEQRHVNTVFQSYALFPHMTVFENVAFGL---RMQKVAESEIEPRVTEALQMV 130          
BLAST of EY735009 vs. ExPASy Swiss-Prot
Match: CYSA_METCA (Sulfate/thiosulfate import ATP-binding protein cysA OS=Methylococcus capsulatus GN=cysA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.736e-13
Identity = 47/115 (40.87%), Postives = 65/115 (56.52%), Query Frame = -2
Query:   31 LHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPH---PRVAVAFQDPSLLPWLSLEKNVAFGLDF-ARQQRLSPEERRNRV 363
            +  + I   +G    L+G DL +  GE+V++LGPSG GK++LLR++AGL+A   G I L GE     H    RV   FQ  +L   +S+ +N+AFGL    R QR    E R RV
Sbjct:    3 IEIRNITKSFGSFQALKGIDLTIGSGELVALLGPSGCGKTTLLRIIAGLEAADSGQILLHGEDTTHRHVRERRVGFVFQHYALFRHMSVFENIAFGLRVRPRGQRPPEAEIRRRV 117          
BLAST of EY735009 vs. ExPASy Swiss-Prot
Match: UGPC_RALEJ (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Ralstonia eutropha (strain JMP134) GN=ugpC PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.267e-13
Identity = 42/113 (37.17%), Postives = 66/113 (58.41%), Query Frame = -2
Query:   43 AVLHAQGICLGYGGN-SVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPR---VAVAFQDPSLLPWLSLEKNVAFGLDFARQQRLSPEER 369
            A L  + +   Y GN  V+ G D+++  GE + I+GPSG GKS+LLR++AGL+   GG IH+    +N   P    +A+ FQ+ +L P +S+  N+A+GL      +   E+R
Sbjct:    2 AKLSLRNVQKTYAGNVKVVHGIDMEIADGEFIVIVGPSGCGKSTLLRMVAGLETITGGDIHIGDRVVNNLEPAERDIAMVFQNYALYPHMSVYDNMAYGLKIRGMAKAEIEQR 114          
BLAST of EY735009 vs. ExPASy Swiss-Prot
Match: TAUB_JANSC (Taurine import ATP-binding protein tauB OS=Jannaschia sp. (strain CCS1) GN=tauB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.267e-13
Identity = 34/83 (40.96%), Postives = 53/83 (63.86%), Query Frame = -2
Query:   85 GGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFG 333
            G    L+   L ++ GE++S+LGPSG GK++LL ++AG  AP  G I L G  ++GP+    + FQ  +L  W+S+ +NV+FG
Sbjct:   19 GSVQALQDVSLDIKQGEIMSVLGPSGCGKTTLLNIVAGFLAPTDGVIELNGHEVHGPNAERGMVFQKGALFEWMSVRENVSFG 101          
BLAST of EY735009 vs. ExPASy Swiss-Prot
Match: TAUB_BURCH (Taurine import ATP-binding protein tauB OS=Burkholderia cenocepacia (strain HI2424) GN=tauB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.267e-13
Identity = 44/115 (38.26%), Postives = 59/115 (51.30%), Query Frame = -2
Query:   43 AVLHAQGICLGYGGN------SVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARQQRLSPEER 369
            + L  + + + Y G         L   DL++  GE V  LG SG GK++LL  +AG  AP  G + + G P+ GP     V FQ  +LLPWL +  NVA GL FAR  +   E R
Sbjct:    2 STLEVRQVSVAYPGERGRPTTQALAQVDLRIDAGEFVVALGASGCGKTTLLNCMAGFVAPTTGDVRVDGVPIAGPGADRGVVFQKYALLPWLDVLDNVALGLRFARVSKAEREAR 116          
BLAST of EY735009 vs. ExPASy Swiss-Prot
Match: TAUB_BURCA (Taurine import ATP-binding protein tauB OS=Burkholderia cenocepacia (strain AU 1054) GN=tauB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.267e-13
Identity = 44/115 (38.26%), Postives = 59/115 (51.30%), Query Frame = -2
Query:   43 AVLHAQGICLGYGGN------SVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARQQRLSPEER 369
            + L  + + + Y G         L   DL++  GE V  LG SG GK++LL  +AG  AP  G + + G P+ GP     V FQ  +LLPWL +  NVA GL FAR  +   E R
Sbjct:    2 STLEVRQVSVAYPGERGRPTTQALAQVDLRIDAGEFVVALGASGCGKTTLLNCMAGFVAPTTGDVRVDGVPIAGPGADRGVVFQKYALLPWLDVLDNVALGLRFARVSKAEREAR 116          
BLAST of EY735009 vs. ExPASy Swiss-Prot
Match: SSUB_RHOP5 (Aliphatic sulfonates import ATP-binding protein ssuB OS=Rhodopseudomonas palustris (strain BisA53) GN=ssuB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.267e-13
Identity = 41/85 (48.24%), Postives = 53/85 (62.35%), Query Frame = -2
Query:   82 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL 336
            +G NSVL G DL +  G+ V+I+G SG GKS+LLR++AGL  P  G+I    + L G    V V FQ+P LLPW  +  NV  GL
Sbjct:   49 FGDNSVLRGIDLHIPAGQFVTIVGRSGCGKSTLLRLIAGLDQPTAGNIGFGDDRLPGD---VRVMFQEPRLLPWARVLANVEVGL 130          
BLAST of EY735009 vs. ExPASy Swiss-Prot
Match: SSUB1_BURXL (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Burkholderia xenovorans (strain LB400) GN=ssuB1 PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 2.961e-13
Identity = 45/118 (38.14%), Postives = 63/118 (53.39%), Query Frame = -2
Query:   82 DRDPELGAVAHRVEPSGQSMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL 435
            D  P  GA+A      G+  +   +  +G+   YG   VL GFDL ++ G  V+I+G SG GKS+LLR++AGL+    G +    E   G      + FQD  LLPW S+ +NV  GL
Sbjct:   59 DAQPPAGALAR---DDGRRAADYSVQLRGVGKRYGEREVLSGFDLSIERGSFVAIVGRSGCGKSTLLRLVAGLEKATSGVLEKRNE--EGGPLDTRIMFQDARLLPWKSVLQNVMLGL 171          
BLAST of EY735009 vs. ExPASy Swiss-Prot
Match: POTA_MARAV (Spermidine/putrescine import ATP-binding protein potA OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=potA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.961e-13
Identity = 43/126 (34.13%), Postives = 70/126 (55.56%), Query Frame = -2
Query:   10 MSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPR---VAVAFQDPSLLPWLSLEKNVAFGLDFARQQRLSPEERRNRVDPGIRTV 378
            M Q +L    +   + G  VL+  DL +  GE +++LGPSG GK++LLR++AG + P  G+I L  + L    P    +   FQ+ +L P +S+  NVA+GL   + ++   +E R RV+  +  V
Sbjct:    1 MKQTLLSLSNLTKQFDGKKVLDSLDLDIFDGEFITLLGPSGCGKTTLLRMMAGFEHPDDGTIALGDQDLTHTPPEHRPLNTVFQNYALFPHMSVFDNVAYGL---KMEKRPKQEIRERVEDALAMV 123          
The following BLAST results are available for this feature:
BLAST of EY735009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
UGPC2_RHIEC1.736e-1340.00sn-glycerol-3-phosphate import ATP-binding protein... [more]
POTA_VIBF11.736e-1335.16Spermidine/putrescine import ATP-binding protein p... [more]
CYSA_METCA1.736e-1340.87Sulfate/thiosulfate import ATP-binding protein cys... [more]
UGPC_RALEJ2.267e-1337.17sn-glycerol-3-phosphate import ATP-binding protein... [more]
TAUB_JANSC2.267e-1340.96Taurine import ATP-binding protein tauB OS=Jannasc... [more]
TAUB_BURCH2.267e-1338.26Taurine import ATP-binding protein tauB OS=Burkhol... [more]
TAUB_BURCA2.267e-1338.26Taurine import ATP-binding protein tauB OS=Burkhol... [more]
SSUB_RHOP52.267e-1348.24Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB1_BURXL2.961e-1338.14Aliphatic sulfonates import ATP-binding protein ss... [more]
POTA_MARAV2.961e-1334.13Spermidine/putrescine import ATP-binding protein p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-075-C06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735009 ID=EY735009; Name=EY735009; organism=Citrus sinensis; type=EST; length=595bp
GACCTGCAGTACGGTCCGGATTCCCGGGTCGACCCGGTTGCGTCGTTCTT
CAGGACTGAGGCGCTGTTGGCGGGCAAAGTCCAGGCCGAAGGCGACGTTC
TTTTCCAGGCTCAACCACGGCAACAGGCTGGGGTCCTGGAACGCCACCGC
CACCCGCGGATGCGGGCCATTCAACGGCTCGCCCAGCAGGTGAATGCTGC
CGCCCTGGGGCGCCTGCAAACCGGCAAGCACCCGCAGCAGGCTGGACTTG
CCAACGCCGCTGGGGCCGAGGATCGACACCACTTCGCCGGGCTGCAATTG
CAGGTCGAACCCTTCCAGCACCGAGTTGCCCCCATAGCCCAGGCAAATTC
CCTGGGCATGCAGTACCGCCTGGCTCATAGATTGGCCTGACGGTTCAACT
CGGTGCGCAACTGCACCAAGCTCGGGGTCACGATCGGCACAAACGCCGAC
TCGCGCCAACGCCGGGCGAAACCGCTGCCGTGGGCAGTCAGGTAGGCCTT
GCCACCGCTGGCTTGCAGCTCCAGTTGGACGGCGCTGGCGGCAATTTCCG
CGAGAGCAATGCGCAGGCGGAACAACGGTAACGGCTCGGTCCCGA
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