EY734962

Overview
NameEY734962
Unique NameEY734962
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY734962 vs. ExPASy Swiss-Prot
Match: PSBO_CHLRE (Oxygen-evolving enhancer protein 1, chloroplastic OS=Chlamydomonas reinhardtii GN=PSBO PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.864e-16
Identity = 43/113 (38.05%), Postives = 65/113 (57.52%), Query Frame = 2 
Query:  269 ATSALLYAGAIAEGGPERLTYDEIQSQTCMEVKGTGTANHCPTIDGGGDSFA-FTPGKDQVKKLCLQPTSFTVNADGANENAPPDFQNTELMTRLTYTLGESDGPFELSPNGT 604
            A +A   A A+  G    LT+DEIQ  T ++VKG+G AN CP ++ G  +      G  +++  C++PTSFTV  +   +    +F  T+LMTRLTYTL    G F++  +G+
Sbjct:   34 AAAAAALATAMVAGSANALTFDEIQGLTYLQVKGSGIANTCPVLESGTTNLKELKAGSYKLENFCIEPTSFTVKEESQFKGGETEFVKTKLMTRLTYTLDAMSGSFKVGSDGS 146
[Close]
BLAST of EY734962 vs. ExPASy Swiss-Prot
Match: PSBO_EUGGR (Oxygen-evolving enhancer protein 1, chloroplastic OS=Euglena gracilis GN=PSBO PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.222e-13
Identity = 39/111 (35.14%), Postives = 58/111 (52.25%), Query Frame = 2 
Query:  275 SALLYAGAIAEGGPERLTYDEIQSQTCMEVKGTGTANHCPTI-DGGGDSFAFTPGKDQVKKLCLQPTSFTVNADGANENAPPDFQNTELMTRLTYTLGESDGPFELSPNGT 604
            +AL+ A          LTYDE+QS + +EVK +G A  CP + DG     +   GK ++   CL+P+SF V      +    +F+ T+LMTRLTYTL        +  +G+
Sbjct:   80 AALIGAAVAGSANAASLTYDELQSLSYLEVKSSGIAGTCPVLADGVSSKLSLKAGKYEINNWCLEPSSFQVKLPPTEKQQVTEFERTKLMTRLTYTLDAISADLNVGGDGS 190
The following BLAST results are available for this feature:
BLAST of EY734962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
PSBO_CHLRE3.864e-1638.05Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_EUGGR5.222e-1335.14Oxygen-evolving enhancer protein 1, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-108-F06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY734962 ID=EY734962; Name=EY734962; organism=Citrus sinensis; type=EST; length=815bp
CCCGCCTGGCCCTGGGCGGCGTCGCCCACAAACCCTGGCGTGATCGATCG
GTGGAAGCCGCGCTGATCGGCCTATCCTGCTGCCGCCAAACCTTGAGCAT
GGGCGCCCAACTCTTGCTGCAAGACTGCGAGTCTTTGGAACACAAAGGCT
TCCAGATGATACTGGCGCGCCGCGCGATCGTGCTCGGACTGATTGATGCC
TCTGTTGCGAGATGCACGACTTGACTCCGATCTGTGTTGATGCGGACCGG
ATCGATGGCTTTCTCCTCGCCACTTCTGCTCTCCTATATGCCGGAGCAAT
TGCTGAAGGAGGTCCTGAGAGGCTAACCTATGATGAAATCCAGAGTCAGA
CATGCATGGAAGTGAAGGGAACCGGAACTGCTAACCATTGCCCTACCATT
GATGGCGGAGGTGACTCTTTTGCCTTCACACCTGGCAAAGACCAGGTTAA
AAAACTCTGCCTACAACCCACTTCCTTCACTGTGAACGCTGATGGTGCCA
ACGAGAATGCCCCACCAGATTTCCAGAACACCGAGCTCATGACCCGCCTT
ACGTACACCCTTGGCGAGAGTGACGGACCTTTTGAACTGTCCCCCAATGG
AACCATTAAGGCTGGGGGGAGGAAGGAACTGCTGGGCTTGCGGGACAAGT
CGGGCGTGGGAAGGCACGGGGGGCGGGTCCTGTTAAAATCGGACAAGGGG
AGGGACAAGGGCACCGGAAAAGTTGGGAGCGAGAATGGGAGAGCCACGAA
GACACAAACACAGATCTAGGCCTCGACGGACGGGAGGCGTTCCGCGCGGA
GGGCCCGGTGTGTGC
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