EY734946

Overview
NameEY734946
Unique NameEY734946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY734946 vs. ExPASy Swiss-Prot
Match: UBIQ_ARATH (Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.180e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3 
Query:  204 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 431
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 128.257 bits (321), Expect = 6.271e-29
Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 3 
Query:    6 RPITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 203
            + ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY734946 vs. ExPASy Swiss-Prot
Match: UBIQ_COPCO (Ubiquitin OS=Coprinus congregatus PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.628e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 3 
Query:  204 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 431
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 127.102 bits (318), Expect = 1.397e-28
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 3 
Query:    6 RPITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 203
            + ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY734946 vs. ExPASy Swiss-Prot
Match: UBIQ_CHLRE (Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.433e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 3 
Query:  204 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 431
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 126.716 bits (317), Expect = 1.824e-28
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 3 
Query:    6 RPITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 203
            + ITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   11 KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY734946 vs. ExPASy Swiss-Prot
Match: UBIQ_YEAST (Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.856e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3 
Query:  204 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 431
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 125.946 bits (315), Expect = 3.112e-28
Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 3 
Query:    6 RPITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 203
            + ITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   11 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY734946 vs. ExPASy Swiss-Prot
Match: UBIQ_SCHPO (Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.856e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3 
Query:  204 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 431
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 125.946 bits (315), Expect = 3.112e-28
Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 3 
Query:    6 RPITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 203
            + ITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   11 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY734946 vs. ExPASy Swiss-Prot
Match: UBIQ_KLULA (Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.856e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3 
Query:  204 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 431
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 125.946 bits (315), Expect = 3.112e-28
Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 3 
Query:    6 RPITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 203
            + ITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   11 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY734946 vs. ExPASy Swiss-Prot
Match: UBIQ_CRYNE (Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.856e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3 
Query:  204 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 431
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 125.946 bits (315), Expect = 3.112e-28
Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 3 
Query:    6 RPITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 203
            + ITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   11 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY734946 vs. ExPASy Swiss-Prot
Match: UBIQ_CANAL (Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.856e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3 
Query:  204 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 431
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 125.946 bits (315), Expect = 3.112e-28
Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 3 
Query:    6 RPITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 203
            + ITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   11 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY734946 vs. ExPASy Swiss-Prot
Match: UBL1_ORYSJ (Ubiquitin-like protein 1 OS=Oryza sativa subsp. japonica GN=UBL1 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.648e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3 
Query:  204 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 431
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 125.561 bits (314), Expect = 4.065e-28
Identity = 62/66 (93.94%), Postives = 64/66 (96.97%), Query Frame = 3 
Query:    6 RPITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 203
            + ITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   11 KTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY734946 vs. ExPASy Swiss-Prot
Match: UBIQ_NEUCR (Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.988e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3 
Query:  204 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 431
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 125.176 bits (313), Expect = 5.308e-28
Identity = 62/66 (93.94%), Postives = 64/66 (96.97%), Query Frame = 3 
Query:    6 RPITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 203
            + ITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   11 KTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
The following BLAST results are available for this feature:
BLAST of EY734946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
UBIQ_ARATH1.180e-35100.00Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=... [more]
UBIQ_COPCO2.628e-3598.68Ubiquitin OS=Coprinus congregatus PE=1 SV=1[more]
UBIQ_CHLRE3.433e-3598.68Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=... [more]
UBIQ_YEAST5.856e-3597.37Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1... [more]
UBIQ_SCHPO5.856e-3597.37Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=... [more]
UBIQ_KLULA5.856e-3597.37Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=... [more]
UBIQ_CRYNE5.856e-3597.37Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 ... [more]
UBIQ_CANAL5.856e-3597.37Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1[more]
UBL1_ORYSJ7.648e-3597.37Ubiquitin-like protein 1 OS=Oryza sativa subsp. ja... [more]
UBIQ_NEUCR9.988e-3597.37Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-108-D02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY734946 ID=EY734946; Name=EY734946; organism=Citrus sinensis; type=EST; length=917bp
CCACGCGTCCGATTACTCTTGAGGTTGAAAGTTCTGACACCATTGACAAC
GTGAAAGCAAAAATTCAAGACAAGGAGGGTATCCCACCAGATCAGCAGAG
GCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGAAGGACTCTTGCAGACT
ATAACATCCAGAAAGAATCCACTCTTCACTTGGTTCTTCGCCTCCGTGGT
GGTATGCAGATTTTTGTGAAGACACTCACTGGGAAAACCATCACGTTGGA
GGTTGAGAGTTCGGACACAATTGACAATGTGAAGGCTAAGATCCAGGATA
AGGAGGGGATTCCCCCAGACCAGCAGAGGTTGATCTTTGCTGGAAAACAA
CTTGAGGATGGAAGGACTCTTGCTGATTACAACATCCAGAAGGAGTCCAC
TCTGCATCTTGTGCTCCGACTCCGTGGAGGTTTCTGAGTTTGGTCATCTG
GGTGTGTGTGTGTCTTATTTGCTTCGGTTTGTCTTGGTTAATGTTTGCTG
GCTATTGGTGAAATAGCTTANATAACTATTTGAAGTTTATTTTGGTTTGT
GGTAGTTGAACTCTGTTTCTAAGATATTGATATGGGCCCACTAACGTCCC
ATTATTATATCTTAGAATCTTTTTCCTGGAAAAATACGTGGTTAATGGGC
GAGACTTAAAGAAAAAAACAAAAAAAAAGGGGCGGCCGCTCTGAAAGATC
CCAGGCTTACTAACGCGGGGAGGGCACGGCATAAGCTCCTCATGAGGGGG
CCCCTAAATACAATTTCGCTGGGCCGCCGGTTTAAAAGCTACCGGAACTG
GGAAAAACCCTCGGCGGTGGCGCGAGGTAAAACGCGGTTGGCAAGAGGAC
CCCGCCTTTCCGCCGAGGCGGGCGGAGAAAAGGGAAGAGGAGGGCCCGAC
GGGGGGTGCCGCCTTCC
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