EY734859 | Citrus Genome Database

Overview


Name	EY734859
Unique Name	EY734859
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	920

Libraries


Library Name	Type
Sweet orange fruit, development stadium (5 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_FAGSY (Calmodulin OS=Fagus sylvatica GN=CAMF1 PE=2 SV=3)

HSP 1 Score: 119.783 bits (299), Expect = 1.561e-35
Identity = 60/80 (75.00%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LTD   S  +EAF LFDKDGDGCITT+ELGTVMRSLGQNPTEAEL D+I E D DGNGTIDFP+FL LMAR M DT
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDRDGNGTIDFPEFLNLMARKMKDT 80

HSP 2 Score: 52.373 bits (124), Expect = 1.561e-35
Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++EL+EAFRV   D+ GFISA E+R  MT +G +L D EV+++I E +  G
Sbjct:   81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD-EVDEMIREADVDG 132

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_METSE (Calmodulin OS=Metridium senile PE=1 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 1.561e-35
Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADGNGTIDFP+FL +MAR M DT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 80

HSP 2 Score: 57.7658 bits (138), Expect = 1.561e-35
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAFRV   D  GFISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_LUMRU (Calmodulin OS=Lumbricus rubellus PE=2 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 1.561e-35
Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADGNGTIDFP+FL +MAR M DT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 80

HSP 2 Score: 57.7658 bits (138), Expect = 1.561e-35
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAFRV   D  GFISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_LOCMI (Calmodulin OS=Locusta migratoria PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 1.561e-35
Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADGNGTIDFP+FL +MAR M DT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 80

HSP 2 Score: 57.7658 bits (138), Expect = 1.561e-35
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAFRV   D  GFISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_DROME (Calmodulin OS=Drosophila melanogaster GN=Cam PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 1.561e-35
Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADGNGTIDFP+FL +MAR M DT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 80

HSP 2 Score: 57.7658 bits (138), Expect = 1.561e-35
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAFRV   D  GFISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_CAEEL (Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 1.561e-35
Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADGNGTIDFP+FL +MAR M DT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 80

HSP 2 Score: 57.7658 bits (138), Expect = 1.561e-35
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAFRV   D  GFISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_APLCA (Calmodulin OS=Aplysia californica GN=CAM PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 1.561e-35
Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADGNGTIDFP+FL +MAR M DT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 80

HSP 2 Score: 57.7658 bits (138), Expect = 1.561e-35
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAFRV   D  GFISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALMA_HALRO (Calmodulin-A OS=Halocynthia roretzi PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 1.561e-35
Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADGNGTIDFP+FL +MAR M DT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 80

HSP 2 Score: 57.7658 bits (138), Expect = 1.561e-35
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAFRV   D  GFISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM1_BRALA (Calmodulin-1 OS=Branchiostoma lanceolatum PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 1.561e-35
Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADGNGTIDFP+FL +MAR M DT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 80

HSP 2 Score: 57.7658 bits (138), Expect = 1.561e-35
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAFRV   D  GFISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM1_BRAFL (Calmodulin-1 OS=Branchiostoma floridae PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 1.561e-35
Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADGNGTIDFP+FL +MAR M DT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 80

HSP 2 Score: 57.7658 bits (138), Expect = 1.561e-35
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAFRV   D  GFISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133

The following BLAST results are available for this feature:

BLAST of EY734859 vs. ExPASy Swiss-Prot

BLAST of EY734859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183


Match Name	E-value	Identity	Description
CALM_FAGSY	1.561e-35	75.00	Calmodulin OS=Fagus sylvatica GN=CAMF1 PE=2 SV=3	[more]
CALM_METSE	1.561e-35	71.25	Calmodulin OS=Metridium senile PE=1 SV=3	[more]
CALM_LUMRU	1.561e-35	71.25	Calmodulin OS=Lumbricus rubellus PE=2 SV=3	[more]
CALM_LOCMI	1.561e-35	71.25	Calmodulin OS=Locusta migratoria PE=1 SV=2	[more]
CALM_DROME	1.561e-35	71.25	Calmodulin OS=Drosophila melanogaster GN=Cam PE=1 ...	[more]
CALM_CAEEL	1.561e-35	71.25	Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1...	[more]
CALM_APLCA	1.561e-35	71.25	Calmodulin OS=Aplysia californica GN=CAM PE=2 SV=2	[more]
CALMA_HALRO	1.561e-35	71.25	Calmodulin-A OS=Halocynthia roretzi PE=1 SV=2	[more]
CALM1_BRALA	1.561e-35	71.25	Calmodulin-1 OS=Branchiostoma lanceolatum PE=2 SV=...	[more]
CALM1_BRAFL	1.561e-35	71.25	Calmodulin-1 OS=Branchiostoma floridae PE=2 SV=2	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-704-099-A05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY734859 ID=EY734859; Name=EY734859; organism=Citrus sinensis; type=EST; length=920bp
CCACGCGTCCGCTCTCTCTCCATTTGATTTTGCGGGGCCTTTATTTCCGA
CTTTATGGTGTCTGTCCCAAACAAGTTGGCCGTAGCTCTCACCGACTATA
TTAGCTCCTACATCAGGGAAGCCTTCGGCTTGTTCGACAAGGACGGCGAC
GGTTGCATTACCACCGAGGAGCTTGGCACTGTTATGAGGTCACTGGGTCA
GAACCCCACTGAGGCTGAGCTGGGGGACGTGATCTATGAGGCGGATGCTG
ATGGCAATGGAACTATTGATTTTCCTGATTTCCTAAAGCTCATGGCCAGG
AATATGGGGGATACCCGACTCTCAAGATGAGCTGAGGGAGGCCTTCCGGG
TTTCCCACCTGGATCGCATTGGTTTCATCTCCGCTGTAGAAGTGCGGCGT
GAGATGACAAAGGTTGGGGCGGAGCTTCCTGATGAGGAAGTCGAAGACCT
GATAGGGGAAGGGGAAGCCCCGGGTGCGCGCCCCATAGAGTAGACGGCCC
TGCGCCGACCCCCGGGGCGGGTCAGCACGTCGGCTGCCCCGCCGGCCCCT
CCTCCGCGGACCCCCCACCTAGATGCCGTGAAACGGCGAAAGACGGGCGG
CCCGCCCCCCCCCCCGCCCGACAGGCCAGCAGGCGGGCGGCGCCCCAAAA
GGCGGCCGGCCCCCGCGCGCCGGTAGGGAACGCCGCGTCAAGGGAAGGGC
GGCGCCGCGCGAGCAGGAAACGACCGACGGGAGACCACCCGTCGCGGGAG
CCGCACGGACGCGCGGGCGCGCGACGCGAGGCAGGGGATTCCTATCAGGA
AAGCGACAGTGCGCGACAGGGTGGGGGCGCACGGCACGGCACAGAGCGGG
AGGGGCATCGACGCGTCCAGGGAAGACGGCGCCCGCCGGCCGCGGGCGGG
CGCATCGCGCGCACTCGAGC