EY734859 | Citrus Genome Database

Overview


Name	EY734859
Unique Name	EY734859
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	920

Libraries


Library Name	Type
Sweet orange fruit, development stadium (5 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALMA_ARBPU (Calmodulin-alpha (Fragment) OS=Arbacia punctulata PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 3.458e-35
Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADGNGTIDFP+FL +MAR M DT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 80

HSP 2 Score: 56.6102 bits (135), Expect = 3.458e-35
Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAFRV   D  G+ISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133

[Close]

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALL3_RAT (Calmodulin-like protein 3 OS=Rattus norvegicus GN=Calml3 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.493e-35
Identity = 54/80 (67.50%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDGCITT+ELGTVMRSLGQNPTEAEL D++ E D DGNGT+DFP+FL +M+R M DT
Sbjct:    1 MANQLTEEQIAEFKEAFSLFDKDGDGCITTQELGTVMRSLGQNPTEAELQDMVNEIDKDGNGTVDFPEFLTMMSRKMKDT 80

HSP 2 Score: 56.225 bits (134), Expect = 4.493e-35
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAFRV   D  GF+SA E+R  MT++G +L DEEV+++I   +  G
Sbjct:   81 DSEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIQAADTDG 133

[Close]

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALMB_HALRO (Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 4.493e-35
Identity = 56/80 (70.00%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADGNGTIDFP+FL +MAR M +T
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKET 80

HSP 2 Score: 57.7658 bits (138), Expect = 4.493e-35
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAFRV   D  GFISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133

[Close]

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_RENRE (Calmodulin OS=Renilla reniformis PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 5.853e-35
Identity = 56/80 (70.00%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADG+GTIDFP+FL +MAR M DT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDT 80

HSP 2 Score: 57.7658 bits (138), Expect = 5.853e-35
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAFRV   D  GFISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133

[Close]

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_PYUSP (Calmodulin OS=Pyuridae sp. PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 5.853e-35
Identity = 56/80 (70.00%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADG+GTIDFP+FL +MAR M DT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDT 80

HSP 2 Score: 57.7658 bits (138), Expect = 5.853e-35
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAFRV   D  GFISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133

[Close]

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_PATSP (Calmodulin OS=Patinopecten sp. PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 5.853e-35
Identity = 56/80 (70.00%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADG+GTIDFP+FL +MAR M DT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDT 80

HSP 2 Score: 57.7658 bits (138), Expect = 5.853e-35
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAFRV   D  GFISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133

[Close]

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_PHYPO (Calmodulin OS=Physarum polycephalum PE=2 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 7.624e-35
Identity = 56/77 (72.73%), Postives = 64/77 (83.12%), Query Frame = 1

Query:   85 ALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADGNGTIDFP+FL +MAR M DT
Sbjct:    4 SLTEEQIAEFKEAFSLFDKDGDGNITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMADT 80

HSP 2 Score: 55.8398 bits (133), Expect = 7.624e-35
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            D+++E+REAF+V   D  GFISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DTEEEIREAFKVFDKDGNGFISAAELRHVMTNLGEKLSDEEVDEMIREADVDG 133

[Close]

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_ELEEL (Calmodulin OS=Electrophorus electricus GN=calm PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 7.624e-35
Identity = 56/80 (70.00%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADGNGTIDFP+FL +MA+ M DT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAKKMKDT 80

HSP 2 Score: 56.6102 bits (135), Expect = 7.624e-35
Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAFRV   D  G+ISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133

[Close]

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_HALOK (Calmodulin OS=Halichondria okadai PE=2 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 7.624e-35
Identity = 55/77 (71.43%), Postives = 64/77 (83.12%), Query Frame = 1

Query:   85 ALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            AL++   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADGNGTIDFP+FL +MAR M +T
Sbjct:    4 ALSEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKET 80

HSP 2 Score: 57.7658 bits (138), Expect = 7.624e-35
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAFRV   D  GFISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133

[Close]

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_MOUSC (Calmodulin OS=Mougeotia scalaris PE=2 SV=3)

HSP 1 Score: 115.546 bits (288), Expect = 9.931e-35
Identity = 58/80 (72.50%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADGNGTIDFP+FL LMAR M DT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT 80

HSP 2 Score: 53.9138 bits (128), Expect = 9.931e-35
Identity = 25/53 (47.17%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++EL+EAF+V   D+ G+ISA + R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DSEEELKEAFKVFDKDQNGYISAADWRHVMTNLGEKLTDEEVDEMIREADVDG 133

The following BLAST results are available for this feature:

BLAST of EY734859 vs. ExPASy Swiss-Prot

BLAST of EY734859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183


Match Name	E-value	Identity	Description
CALMA_ARBPU	3.458e-35	71.25	Calmodulin-alpha (Fragment) OS=Arbacia punctulata ...	[more]
CALL3_RAT	4.493e-35	67.50	Calmodulin-like protein 3 OS=Rattus norvegicus GN=...	[more]
CALMB_HALRO	4.493e-35	70.00	Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3	[more]
CALM_RENRE	5.853e-35	70.00	Calmodulin OS=Renilla reniformis PE=1 SV=2	[more]
CALM_PYUSP	5.853e-35	70.00	Calmodulin OS=Pyuridae sp. PE=1 SV=2	[more]
CALM_PATSP	5.853e-35	70.00	Calmodulin OS=Patinopecten sp. PE=1 SV=2	[more]
CALM_PHYPO	7.624e-35	72.73	Calmodulin OS=Physarum polycephalum PE=2 SV=3	[more]
CALM_ELEEL	7.624e-35	70.00	Calmodulin OS=Electrophorus electricus GN=calm PE=...	[more]
CALM_HALOK	7.624e-35	71.43	Calmodulin OS=Halichondria okadai PE=2 SV=3	[more]
CALM_MOUSC	9.931e-35	72.50	Calmodulin OS=Mougeotia scalaris PE=2 SV=3	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-704-099-A05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY734859 ID=EY734859; Name=EY734859; organism=Citrus sinensis; type=EST; length=920bp
CCACGCGTCCGCTCTCTCTCCATTTGATTTTGCGGGGCCTTTATTTCCGA
CTTTATGGTGTCTGTCCCAAACAAGTTGGCCGTAGCTCTCACCGACTATA
TTAGCTCCTACATCAGGGAAGCCTTCGGCTTGTTCGACAAGGACGGCGAC
GGTTGCATTACCACCGAGGAGCTTGGCACTGTTATGAGGTCACTGGGTCA
GAACCCCACTGAGGCTGAGCTGGGGGACGTGATCTATGAGGCGGATGCTG
ATGGCAATGGAACTATTGATTTTCCTGATTTCCTAAAGCTCATGGCCAGG
AATATGGGGGATACCCGACTCTCAAGATGAGCTGAGGGAGGCCTTCCGGG
TTTCCCACCTGGATCGCATTGGTTTCATCTCCGCTGTAGAAGTGCGGCGT
GAGATGACAAAGGTTGGGGCGGAGCTTCCTGATGAGGAAGTCGAAGACCT
GATAGGGGAAGGGGAAGCCCCGGGTGCGCGCCCCATAGAGTAGACGGCCC
TGCGCCGACCCCCGGGGCGGGTCAGCACGTCGGCTGCCCCGCCGGCCCCT
CCTCCGCGGACCCCCCACCTAGATGCCGTGAAACGGCGAAAGACGGGCGG
CCCGCCCCCCCCCCCGCCCGACAGGCCAGCAGGCGGGCGGCGCCCCAAAA
GGCGGCCGGCCCCCGCGCGCCGGTAGGGAACGCCGCGTCAAGGGAAGGGC
GGCGCCGCGCGAGCAGGAAACGACCGACGGGAGACCACCCGTCGCGGGAG
CCGCACGGACGCGCGGGCGCGCGACGCGAGGCAGGGGATTCCTATCAGGA
AAGCGACAGTGCGCGACAGGGTGGGGGCGCACGGCACGGCACAGAGCGGG
AGGGGCATCGACGCGTCCAGGGAAGACGGCGCCCGCCGGCCGCGGGCGGG
CGCATCGCGCGCACTCGAGC