EY734859 | Citrus Genome Database

Overview


Name	EY734859
Unique Name	EY734859
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	920

Libraries


Library Name	Type
Sweet orange fruit, development stadium (5 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALL3_HUMAN (Calmodulin-like protein 3 OS=Homo sapiens GN=CALML3 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.685e-34
Identity = 55/80 (68.75%), Postives = 64/80 (80.00%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDGCITT ELGTVMRSLGQNPTEAEL D++ E D DGNGT+DFP+FL +MAR M DT
Sbjct:    1 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDT 80

HSP 2 Score: 55.0694 bits (131), Expect = 1.685e-34
Identity = 25/53 (47.17%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            D+++E+REAFRV   D  GF+SA E+R  MT++G +L DEEV+++I   +  G
Sbjct:   81 DNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDG 133

[Close]

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALMB_ARBPU (Calmodulin-beta (Fragment) OS=Arbacia punctulata PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.692e-34
Identity = 53/67 (79.10%), Postives = 59/67 (88.06%), Query Frame = 1

Query:  115 REAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADGNGTIDFP+FL +MAR M +T
Sbjct:    3 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKET 69

HSP 2 Score: 57.7658 bits (138), Expect = 1.692e-34
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAFRV   D  GFISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   70 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 122

[Close]

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_PYTSP (Calmodulin OS=Pythium splendens PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.859e-34
Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADGNGTIDFP+FL +MAR M DT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 80

HSP 2 Score: 53.5286 bits (127), Expect = 2.859e-34
Identity = 26/53 (49.06%), Postives = 37/53 (69.81%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+ EAF+V   D  GFISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDG 133

[Close]

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_PHYIN (Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 2.859e-34
Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADGNGTIDFP+FL +MAR M DT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 80

HSP 2 Score: 53.5286 bits (127), Expect = 2.859e-34
Identity = 26/53 (49.06%), Postives = 37/53 (69.81%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+ EAF+V   D  GFISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDG 133

[Close]

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_OREMO (Calmodulin OS=Oreochromis mossambicus GN=calm PE=2 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 2.859e-34
Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADGNGTIDFP+FL +MAR M DT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 80

HSP 2 Score: 53.5286 bits (127), Expect = 2.859e-34
Identity = 26/53 (49.06%), Postives = 37/53 (69.81%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAFRV   D  G+ISA E+R  MT +G +L DE V+++I E +  G
Sbjct:   81 DSEEEIREAFRVFDKDGNGYISAAELRYVMTNLGEKLTDEXVDEMIREADIDG 133

[Close]

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_HETTR (Calmodulin OS=Heterocapsa triquetra PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.859e-34
Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E D+DGNGTIDFP+FL LMAR M DT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDSDGNGTIDFPEFLSLMARKMKDT 80

HSP 2 Score: 53.5286 bits (127), Expect = 2.859e-34
Identity = 26/53 (49.06%), Postives = 37/53 (69.81%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            D+++EL EAF+V   D  GFISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG 133

[Close]

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_MACPY (Calmodulin OS=Macrocystis pyrifera PE=2 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 3.724e-34
Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A  LT+   +  +EAF LFDKDGDG ITT+ELGTVMRSLGQNPTEAEL D+I E DADGNGTIDFP+FL +MAR M DT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 80

HSP 2 Score: 53.1434 bits (126), Expect = 3.724e-34
Identity = 26/53 (49.06%), Postives = 37/53 (69.81%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+ EAF+V   D  GFISA E+R  MT +G +L DEEV+++I E +  G
Sbjct:   81 DSEEEIIEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDG 133

[Close]

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_NEUCR (Calmodulin OS=Neurospora crassa GN=cmd-1 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 3.724e-34
Identity = 55/80 (68.75%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A +LT+   S  +EAF LFDKDGDG ITT+ELGTVMRSLGQNP+E+EL D+I E DAD NGTIDFP+FL +MAR M DT
Sbjct:    1 MADSLTEEQVSEFKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDT 80

HSP 2 Score: 56.9954 bits (136), Expect = 3.724e-34
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAF+V   D  GFISA E+R  MT +G +L D+EV+++I E +  G
Sbjct:   81 DSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDG 133

[Close]

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_MAGGR (Calmodulin OS=Magnaporthe grisea GN=CMD1 PE=3 SV=4)

HSP 1 Score: 110.538 bits (275), Expect = 3.724e-34
Identity = 55/80 (68.75%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A +LT+   S  +EAF LFDKDGDG ITT+ELGTVMRSLGQNP+E+EL D+I E DAD NGTIDFP+FL +MAR M DT
Sbjct:    1 MADSLTEEQVSEFKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDT 80

HSP 2 Score: 56.9954 bits (136), Expect = 3.724e-34
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAF+V   D  GFISA E+R  MT +G +L D+EV+++I E +  G
Sbjct:   81 DSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDG 133

[Close]

BLAST of EY734859 vs. ExPASy Swiss-Prot
Match: CALM_COLTR (Calmodulin OS=Colletotrichum trifolii PE=3 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 3.724e-34
Identity = 55/80 (68.75%), Postives = 65/80 (81.25%), Query Frame = 1

Query:   76 LAVALTDYISSYIREAFGLFDKDGDGCITTEELGTVMRSLGQNPTEAELGDVIYEADADGNGTIDFPDFLKLMARNMGDT 315
            +A +LT+   S  +EAF LFDKDGDG ITT+ELGTVMRSLGQNP+E+EL D+I E DAD NGTIDFP+FL +MAR M DT
Sbjct:    1 MADSLTEEQVSEFKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDT 80

HSP 2 Score: 56.9954 bits (136), Expect = 3.724e-34
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 2

Query:  317 DSQDELREAFRVSHLDRIGFISAVEVRREMTKVGAELPDEEVEDLIGEGEAPG 475
            DS++E+REAF+V   D  GFISA E+R  MT +G +L D+EV+++I E +  G
Sbjct:   81 DSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDG 133

The following BLAST results are available for this feature:

BLAST of EY734859 vs. ExPASy Swiss-Prot

BLAST of EY734859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183


Match Name	E-value	Identity	Description
CALL3_HUMAN	1.685e-34	68.75	Calmodulin-like protein 3 OS=Homo sapiens GN=CALML...	[more]
CALMB_ARBPU	1.692e-34	79.10	Calmodulin-beta (Fragment) OS=Arbacia punctulata P...	[more]
CALM_PYTSP	2.859e-34	71.25	Calmodulin OS=Pythium splendens PE=2 SV=1	[more]
CALM_PHYIN	2.859e-34	71.25	Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 ...	[more]
CALM_OREMO	2.859e-34	71.25	Calmodulin OS=Oreochromis mossambicus GN=calm PE=2...	[more]
CALM_HETTR	2.859e-34	71.25	Calmodulin OS=Heterocapsa triquetra PE=2 SV=1	[more]
CALM_MACPY	3.724e-34	71.25	Calmodulin OS=Macrocystis pyrifera PE=2 SV=3	[more]
CALM_NEUCR	3.724e-34	68.75	Calmodulin OS=Neurospora crassa GN=cmd-1 PE=1 SV=2	[more]
CALM_MAGGR	3.724e-34	68.75	Calmodulin OS=Magnaporthe grisea GN=CMD1 PE=3 SV=4	[more]
CALM_COLTR	3.724e-34	68.75	Calmodulin OS=Colletotrichum trifolii PE=3 SV=2	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-704-099-A05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY734859 ID=EY734859; Name=EY734859; organism=Citrus sinensis; type=EST; length=920bp
CCACGCGTCCGCTCTCTCTCCATTTGATTTTGCGGGGCCTTTATTTCCGA
CTTTATGGTGTCTGTCCCAAACAAGTTGGCCGTAGCTCTCACCGACTATA
TTAGCTCCTACATCAGGGAAGCCTTCGGCTTGTTCGACAAGGACGGCGAC
GGTTGCATTACCACCGAGGAGCTTGGCACTGTTATGAGGTCACTGGGTCA
GAACCCCACTGAGGCTGAGCTGGGGGACGTGATCTATGAGGCGGATGCTG
ATGGCAATGGAACTATTGATTTTCCTGATTTCCTAAAGCTCATGGCCAGG
AATATGGGGGATACCCGACTCTCAAGATGAGCTGAGGGAGGCCTTCCGGG
TTTCCCACCTGGATCGCATTGGTTTCATCTCCGCTGTAGAAGTGCGGCGT
GAGATGACAAAGGTTGGGGCGGAGCTTCCTGATGAGGAAGTCGAAGACCT
GATAGGGGAAGGGGAAGCCCCGGGTGCGCGCCCCATAGAGTAGACGGCCC
TGCGCCGACCCCCGGGGCGGGTCAGCACGTCGGCTGCCCCGCCGGCCCCT
CCTCCGCGGACCCCCCACCTAGATGCCGTGAAACGGCGAAAGACGGGCGG
CCCGCCCCCCCCCCCGCCCGACAGGCCAGCAGGCGGGCGGCGCCCCAAAA
GGCGGCCGGCCCCCGCGCGCCGGTAGGGAACGCCGCGTCAAGGGAAGGGC
GGCGCCGCGCGAGCAGGAAACGACCGACGGGAGACCACCCGTCGCGGGAG
CCGCACGGACGCGCGGGCGCGCGACGCGAGGCAGGGGATTCCTATCAGGA
AAGCGACAGTGCGCGACAGGGTGGGGGCGCACGGCACGGCACAGAGCGGG
AGGGGCATCGACGCGTCCAGGGAAGACGGCGCCCGCCGGCCGCGGGCGGG
CGCATCGCGCGCACTCGAGC