EY734857

Overview
NameEY734857
Unique NameEY734857
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: LLDD_CITK8 (L-lactate dehydrogenase [cytochrome] OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=lldD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.089e-17
Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 3 
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHM 482
            +KG+L P+DAR A    A GI+VSNHG RQLD V ++  AL  +  A  G I +L D G++ G DV + +A  A  + +GR   Y+L +AG   +  +L +
Sbjct:  250 IKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATAGQAGVANLLDL 350

HSP 2 Score: 30.8018 bits (68), Expect = 4.089e-17
Identity = 16/50 (32.00%), Postives = 27/50 (54.00%), Query Frame = 2 
Query:   53 DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILSEG 187
            DLG +       +GL  Y+   A   D S+SWKD++W++     P++ +G
Sbjct:  203 DLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKG 252
[Close]
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: LLDD_ERWCT (L-lactate dehydrogenase [cytochrome] OS=Erwinia carotovora subsp. atroseptica GN=lldD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 4.092e-17
Identity = 45/125 (36.00%), Postives = 69/125 (55.20%), Query Frame = 3 
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHMHNRKYHLPTDLNMPSMIQPKTAIS 554
            +KG+L P+DA+ A    A GI+VSNHG RQLD V +T  AL  +  A  G I +L D G++ G DV + +A  A  + +GR   Y+L +AG   +  +L++  ++  +   L     I   T+ S
Sbjct:  250 IKGILDPEDAKEAVRFGADGIVVSNHGGRQLDGVLSTAHALPAIADAVKGDITILADSGIRSGLDVVRMIALGADGVMLGRAFVYALAAAGEAGVVNLLNLIEKEMRVAMTLTGAKSIADITSDS 374

HSP 2 Score: 30.0314 bits (66), Expect = 4.092e-17
Identity = 10/30 (33.33%), Postives = 20/30 (66.67%), Query Frame = 2 
Query:   98 YVAGQIDRSLSWKDVKWLQTITKLPILSEG 187
            ++A   D S+SW+D+ W++   K P++ +G
Sbjct:  223 WLAANFDPSISWQDLAWIREFWKGPMIIKG 252
[Close]
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: LLDD_YERPY (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=lldD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.093e-17
Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 3 
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAG 452
            +KG+L P+DA+ A    A GI+VSNHG RQLD V +T  AL  +  A  G I +L D G++ G DV + +A  A  + +GR   Y+L +AG
Sbjct:  250 IKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAG 340

HSP 2 Score: 30.8018 bits (68), Expect = 4.093e-17
Identity = 14/44 (31.82%), Postives = 25/44 (56.82%), Query Frame = 2 
Query:   56 LGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILSEG 187
            LGK     D     ++A   D S+SWKD++W++   + P++ +G
Sbjct:  211 LGKPTTLED--YMGWIATNFDPSISWKDLEWVREFWQGPMIIKG 252
[Close]
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: LLDD_YERPS (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis GN=lldD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.093e-17
Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 3 
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAG 452
            +KG+L P+DA+ A    A GI+VSNHG RQLD V +T  AL  +  A  G I +L D G++ G DV + +A  A  + +GR   Y+L +AG
Sbjct:  250 IKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAG 340

HSP 2 Score: 30.8018 bits (68), Expect = 4.093e-17
Identity = 14/44 (31.82%), Postives = 25/44 (56.82%), Query Frame = 2 
Query:   56 LGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILSEG 187
            LGK     D     ++A   D S+SWKD++W++   + P++ +G
Sbjct:  211 LGKPTTLED--YMGWIATNFDPSISWKDLEWVREFWQGPMIIKG 252
[Close]
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: LLDD_YERPP (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis (strain Pestoides F) GN=lldD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.093e-17
Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 3 
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAG 452
            +KG+L P+DA+ A    A GI+VSNHG RQLD V +T  AL  +  A  G I +L D G++ G DV + +A  A  + +GR   Y+L +AG
Sbjct:  250 IKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAG 340

HSP 2 Score: 30.8018 bits (68), Expect = 4.093e-17
Identity = 14/44 (31.82%), Postives = 25/44 (56.82%), Query Frame = 2 
Query:   56 LGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILSEG 187
            LGK     D     ++A   D S+SWKD++W++   + P++ +G
Sbjct:  211 LGKPTTLED--YMGWIATNFDPSISWKDLEWVREFWQGPMIIKG 252
[Close]
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: LLDD_YERPN (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=lldD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.093e-17
Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 3 
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAG 452
            +KG+L P+DA+ A    A GI+VSNHG RQLD V +T  AL  +  A  G I +L D G++ G DV + +A  A  + +GR   Y+L +AG
Sbjct:  250 IKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAG 340

HSP 2 Score: 30.8018 bits (68), Expect = 4.093e-17
Identity = 14/44 (31.82%), Postives = 25/44 (56.82%), Query Frame = 2 
Query:   56 LGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILSEG 187
            LGK     D     ++A   D S+SWKD++W++   + P++ +G
Sbjct:  211 LGKPTTLED--YMGWIATNFDPSISWKDLEWVREFWQGPMIIKG 252
[Close]
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: LLDD_YERPG (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Angola) GN=lldD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.093e-17
Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 3 
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAG 452
            +KG+L P+DA+ A    A GI+VSNHG RQLD V +T  AL  +  A  G I +L D G++ G DV + +A  A  + +GR   Y+L +AG
Sbjct:  250 IKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAG 340

HSP 2 Score: 30.8018 bits (68), Expect = 4.093e-17
Identity = 14/44 (31.82%), Postives = 25/44 (56.82%), Query Frame = 2 
Query:   56 LGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILSEG 187
            LGK     D     ++A   D S+SWKD++W++   + P++ +G
Sbjct:  211 LGKPTTLED--YMGWIATNFDPSISWKDLEWVREFWQGPMIIKG 252
[Close]
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: LLDD_YERPE (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis GN=lldD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.093e-17
Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 3 
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAG 452
            +KG+L P+DA+ A    A GI+VSNHG RQLD V +T  AL  +  A  G I +L D G++ G DV + +A  A  + +GR   Y+L +AG
Sbjct:  250 IKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAG 340

HSP 2 Score: 30.8018 bits (68), Expect = 4.093e-17
Identity = 14/44 (31.82%), Postives = 25/44 (56.82%), Query Frame = 2 
Query:   56 LGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILSEG 187
            LGK     D     ++A   D S+SWKD++W++   + P++ +G
Sbjct:  211 LGKPTTLED--YMGWIATNFDPSISWKDLEWVREFWQGPMIIKG 252
[Close]
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: LLDD_YERPB (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=lldD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.093e-17
Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 3 
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAG 452
            +KG+L P+DA+ A    A GI+VSNHG RQLD V +T  AL  +  A  G I +L D G++ G DV + +A  A  + +GR   Y+L +AG
Sbjct:  250 IKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAG 340

HSP 2 Score: 30.8018 bits (68), Expect = 4.093e-17
Identity = 14/44 (31.82%), Postives = 25/44 (56.82%), Query Frame = 2 
Query:   56 LGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILSEG 187
            LGK     D     ++A   D S+SWKD++W++   + P++ +G
Sbjct:  211 LGKPTTLED--YMGWIATNFDPSISWKDLEWVREFWQGPMIIKG 252
[Close]
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: LLDD_YERPA (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=lldD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.093e-17
Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 3 
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAG 452
            +KG+L P+DA+ A    A GI+VSNHG RQLD V +T  AL  +  A  G I +L D G++ G DV + +A  A  + +GR   Y+L +AG
Sbjct:  250 IKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAG 340

HSP 2 Score: 30.8018 bits (68), Expect = 4.093e-17
Identity = 14/44 (31.82%), Postives = 25/44 (56.82%), Query Frame = 2 
Query:   56 LGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILSEG 187
            LGK     D     ++A   D S+SWKD++W++   + P++ +G
Sbjct:  211 LGKPTTLED--YMGWIATNFDPSISWKDLEWVREFWQGPMIIKG 252
The following BLAST results are available for this feature:
BLAST of EY734857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
LLDD_CITK84.089e-1740.59L-lactate dehydrogenase [cytochrome] OS=Citrobacte... [more]
LLDD_ERWCT4.092e-1736.00L-lactate dehydrogenase [cytochrome] OS=Erwinia ca... [more]
LLDD_YERPY4.093e-1743.96L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPS4.093e-1743.96L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPP4.093e-1743.96L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPN4.093e-1743.96L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPG4.093e-1743.96L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPE4.093e-1743.96L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPB4.093e-1743.96L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPA4.093e-1743.96L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-103-H12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY734857 ID=EY734857; Name=EY734857; organism=Citrus sinensis; type=EST; length=820bp
CCACGCGTCCGCTCTACCACCATTTTTGACATTAAAGAATTTTCATGGTT
TGGACCTTGGCAAGATGGACGAGGCAAATGACTCTGGGCTTGCTGCCTAT
GTTGCTGGTCAAATTGATCGTTCTCTGAGCTGGAAGGACGTGAAGTGGCT
TCAAACAATCACCAAATTGCCAATTCTGAGTGAAGGGTGTACTCACACCA
CAGGATGCGCGGATTGCATGATCGGCTGAAGCAACTGGCATTATTGTATC
CAATCATGGACCTCGTCAACTTGACTATGTCCCTGCCACTATCATGGCCC
TGGAAGAGGTTGTGAAAGCTACTCATGGGCGTATTCCTGTGCTCTTGGAT
GGTGGTGTTAAGCGAGGAACTGATGTCTTCAAAACATTGGCACCTGAAGC
CTCTGATATATTTATTGGACGACCAGCGGCGTACTCATTGACATCTGCCG
GACACATATGCCTAAAAACAGTACTCCACATGCATAACAGAAAATACCAT
CTACCCACGGATCTAAATATGCCATCAATGATCCAACCTAAAACTGCCAT
ATCACCTAACCTTGTGTACGCGCCACCATCTCCTCTCCACCCCCTGTCTT
CACACTGCAGGATACCGACATCTACCAAACCACTCAATCTCAACAATTCC
ATTAACCCACTCTGTACTAACATATACCGTGCAAGGCATCAAACATCCAT
TACATATGCACGCACCTATATGCCACCCTCCCCCCACCTACTCCACACAT
CTACCTACCTCCCGGCCAACATACCAGATACCGCAACCAACGCTATATTG
CCGCTCATACCAGCCACTCA
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