EY734857

Overview
NameEY734857
Unique NameEY734857
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: LLDD_YERP3 (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=lldD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.093e-17
Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 3 
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAG 452
            +KG+L P+DA+ A    A GI+VSNHG RQLD V +T  AL  +  A  G I +L D G++ G DV + +A  A  + +GR   Y+L +AG
Sbjct:  250 IKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAG 340

HSP 2 Score: 30.8018 bits (68), Expect = 4.093e-17
Identity = 14/44 (31.82%), Postives = 25/44 (56.82%), Query Frame = 2 
Query:   56 LGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILSEG 187
            LGK     D     ++A   D S+SWKD++W++   + P++ +G
Sbjct:  211 LGKPTTLED--YMGWIATNFDPSISWKDLEWVREFWQGPMIIKG 252
[Close]
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: LLDD_AGRVS (L-lactate dehydrogenase [cytochrome] OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=lldD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 4.093e-17
Identity = 42/112 (37.50%), Postives = 65/112 (58.04%), Query Frame = 3 
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHMHNRKYHLPTDL 515
            +KG+L P+DA+ A    A GIIVSNHG RQLD V ++  AL  +  A  G + +L D G++ G DV + +A  A  + IGR   Y+L +AG   ++ +L +  ++  +   L
Sbjct:  250 IKGILDPEDAKDAVRFGADGIIVSNHGGRQLDGVLSSARALPAIAAAVKGDLTILADSGIRSGLDVVRMIAQGADGVLIGRAFVYALAAAGQAGVENLLDLFAKEMRVAMTL 361

HSP 2 Score: 30.0314 bits (66), Expect = 4.093e-17
Identity = 10/42 (23.81%), Postives = 23/42 (54.76%), Query Frame = 2 
Query:   62 KMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILSEG 187
            +  + N +    ++    D S+ WKD++W++   K P++ +G
Sbjct:  211 RQQKTNLADYVGWLGENFDPSIGWKDLEWIRDFWKGPMIIKG 252
[Close]
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: LLDD_ECO81 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O81 (strain ED1a) GN=lldD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 6.910e-17
Identity = 42/101 (41.58%), Postives = 61/101 (60.40%), Query Frame = 3 
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHM 482
            +KG+L P+DAR A    A GI+VSNHG RQLD V ++  AL  +  A  G I +L D G++ G DV + +A  A  I +GR   Y+L +AG   +  +L++
Sbjct:  250 IKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTILLGRAFLYALATAGQAGVANLLNL 350

HSP 2 Score: 29.261 bits (64), Expect = 6.910e-17
Identity = 15/50 (30.00%), Postives = 26/50 (52.00%), Query Frame = 2 
Query:   53 DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILSEG 187
            DLG +       +GL  Y+       D S+SWKD++W++     P++ +G
Sbjct:  203 DLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKG 252
[Close]
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: LLDD_SALTY (L-lactate dehydrogenase [cytochrome] OS=Salmonella typhimurium GN=lldD PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.910e-17
Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 3 
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHM 482
            +KG+L P+DAR A    A GI+VSNHG RQLD V ++  AL  +  A  G I +L D G++ G DV + +A  A  + +GR   Y+L +AG   +  +L +
Sbjct:  250 IKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDL 350

HSP 2 Score: 30.8018 bits (68), Expect = 6.910e-17
Identity = 16/50 (32.00%), Postives = 27/50 (54.00%), Query Frame = 2 
Query:   53 DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILSEG 187
            DLG +       +GL  Y+   A   D S+SWKD++W++     P++ +G
Sbjct:  203 DLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKG 252
[Close]
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: LLDD_SALTI (L-lactate dehydrogenase [cytochrome] OS=Salmonella typhi GN=lldD PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.910e-17
Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 3 
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHM 482
            +KG+L P+DAR A    A GI+VSNHG RQLD V ++  AL  +  A  G I +L D G++ G DV + +A  A  + +GR   Y+L +AG   +  +L +
Sbjct:  250 IKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKTGVANLLDL 350

HSP 2 Score: 30.8018 bits (68), Expect = 6.910e-17
Identity = 16/50 (32.00%), Postives = 27/50 (54.00%), Query Frame = 2 
Query:   53 DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILSEG 187
            DLG +       +GL  Y+   A   D S+SWKD++W++     P++ +G
Sbjct:  203 DLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKG 252
[Close]
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: LLDD_SALSV (L-lactate dehydrogenase [cytochrome] OS=Salmonella schwarzengrund (strain CVM19633) GN=lldD PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.910e-17
Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 3 
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHM 482
            +KG+L P+DAR A    A GI+VSNHG RQLD V ++  AL  +  A  G I +L D G++ G DV + +A  A  + +GR   Y+L +AG   +  +L +
Sbjct:  250 IKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDL 350

HSP 2 Score: 30.8018 bits (68), Expect = 6.910e-17
Identity = 16/50 (32.00%), Postives = 27/50 (54.00%), Query Frame = 2 
Query:   53 DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILSEG 187
            DLG +       +GL  Y+   A   D S+SWKD++W++     P++ +G
Sbjct:  203 DLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKG 252
[Close]
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: LLDD_SALPK (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi A (strain AKU_12601) GN=lldD PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.910e-17
Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 3 
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHM 482
            +KG+L P+DAR A    A GI+VSNHG RQLD V ++  AL  +  A  G I +L D G++ G DV + +A  A  + +GR   Y+L +AG   +  +L +
Sbjct:  250 IKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDL 350

HSP 2 Score: 30.8018 bits (68), Expect = 6.910e-17
Identity = 16/50 (32.00%), Postives = 27/50 (54.00%), Query Frame = 2 
Query:   53 DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILSEG 187
            DLG +       +GL  Y+   A   D S+SWKD++W++     P++ +G
Sbjct:  203 DLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKG 252
[Close]
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: LLDD_SALPB (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=lldD PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.910e-17
Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 3 
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHM 482
            +KG+L P+DAR A    A GI+VSNHG RQLD V ++  AL  +  A  G I +L D G++ G DV + +A  A  + +GR   Y+L +AG   +  +L +
Sbjct:  250 IKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDL 350

HSP 2 Score: 30.8018 bits (68), Expect = 6.910e-17
Identity = 16/50 (32.00%), Postives = 27/50 (54.00%), Query Frame = 2 
Query:   53 DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILSEG 187
            DLG +       +GL  Y+   A   D S+SWKD++W++     P++ +G
Sbjct:  203 DLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKG 252
[Close]
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: LLDD_SALPA (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi A GN=lldD PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.910e-17
Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 3 
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHM 482
            +KG+L P+DAR A    A GI+VSNHG RQLD V ++  AL  +  A  G I +L D G++ G DV + +A  A  + +GR   Y+L +AG   +  +L +
Sbjct:  250 IKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDL 350

HSP 2 Score: 30.8018 bits (68), Expect = 6.910e-17
Identity = 16/50 (32.00%), Postives = 27/50 (54.00%), Query Frame = 2 
Query:   53 DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILSEG 187
            DLG +       +GL  Y+   A   D S+SWKD++W++     P++ +G
Sbjct:  203 DLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKG 252
[Close]
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: LLDD_SALNS (L-lactate dehydrogenase [cytochrome] OS=Salmonella newport (strain SL254) GN=lldD PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.910e-17
Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 3 
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHM 482
            +KG+L P+DAR A    A GI+VSNHG RQLD V ++  AL  +  A  G I +L D G++ G DV + +A  A  + +GR   Y+L +AG   +  +L +
Sbjct:  250 IKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDL 350

HSP 2 Score: 30.8018 bits (68), Expect = 6.910e-17
Identity = 16/50 (32.00%), Postives = 27/50 (54.00%), Query Frame = 2 
Query:   53 DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILSEG 187
            DLG +       +GL  Y+   A   D S+SWKD++W++     P++ +G
Sbjct:  203 DLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKG 252
The following BLAST results are available for this feature:
BLAST of EY734857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
LLDD_YERP34.093e-1743.96L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_AGRVS4.093e-1737.50L-lactate dehydrogenase [cytochrome] OS=Agrobacter... [more]
LLDD_ECO816.910e-1741.58L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_SALTY6.910e-1740.59L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALTI6.910e-1740.59L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALSV6.910e-1740.59L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALPK6.910e-1740.59L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALPB6.910e-1740.59L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALPA6.910e-1740.59L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALNS6.910e-1740.59L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-103-H12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY734857 ID=EY734857; Name=EY734857; organism=Citrus sinensis; type=EST; length=820bp
CCACGCGTCCGCTCTACCACCATTTTTGACATTAAAGAATTTTCATGGTT
TGGACCTTGGCAAGATGGACGAGGCAAATGACTCTGGGCTTGCTGCCTAT
GTTGCTGGTCAAATTGATCGTTCTCTGAGCTGGAAGGACGTGAAGTGGCT
TCAAACAATCACCAAATTGCCAATTCTGAGTGAAGGGTGTACTCACACCA
CAGGATGCGCGGATTGCATGATCGGCTGAAGCAACTGGCATTATTGTATC
CAATCATGGACCTCGTCAACTTGACTATGTCCCTGCCACTATCATGGCCC
TGGAAGAGGTTGTGAAAGCTACTCATGGGCGTATTCCTGTGCTCTTGGAT
GGTGGTGTTAAGCGAGGAACTGATGTCTTCAAAACATTGGCACCTGAAGC
CTCTGATATATTTATTGGACGACCAGCGGCGTACTCATTGACATCTGCCG
GACACATATGCCTAAAAACAGTACTCCACATGCATAACAGAAAATACCAT
CTACCCACGGATCTAAATATGCCATCAATGATCCAACCTAAAACTGCCAT
ATCACCTAACCTTGTGTACGCGCCACCATCTCCTCTCCACCCCCTGTCTT
CACACTGCAGGATACCGACATCTACCAAACCACTCAATCTCAACAATTCC
ATTAACCCACTCTGTACTAACATATACCGTGCAAGGCATCAAACATCCAT
TACATATGCACGCACCTATATGCCACCCTCCCCCCACCTACTCCACACAT
CTACCTACCTCCCGGCCAACATACCAGATACCGCAACCAACGCTATATTG
CCGCTCATACCAGCCACTCA
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