EY756590

Overview
NameEY756590
Unique NameEY756590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_CHLCH (Triosephosphate isomerase OS=Chlorobium chlorochromatii (strain CaD3) GN=tpiA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.150e-22
Identity = 57/115 (49.57%), Postives = 75/115 (65.22%), Query Frame = 1 
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 357
            R +G T D+V+AQ +     VS  S +V+AYEPVWAIGTGK AT AQA+EVH  +R  +        A A RI YGGSV  +N  EL A P++DG L+GGASL   +F+ I+++A
Sbjct:  135 RESGVTGDIVSAQVREGLVGVSDISNVVIAYEPVWAIGTGKTATSAQAEEVHLMIRTLVTELYGEPAAQALRIQYGGSVKPSNAVELFAMPNIDGGLIGGASLNAADFVAIVQAA 249
[Close]
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_ALCBS (Triosephosphate isomerase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=tpiA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.150e-22
Identity = 58/118 (49.15%), Postives = 80/118 (67.80%), Query Frame = 1 
Query:   16 RPAGSTLDVVAAQTKAIADRV--SSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 360
            R +G+T  +V  Q +A+ D V  ++ +  ++AYEPVWAIGTGK A+P QAQ VH  LR++L A   P+IA + R++YGGSV   N   L AQ D+DG L+GGASL  + FI I ++AE
Sbjct:  131 RDSGNTDTIVCGQLRAVVDAVGVAAFANAIVAYEPVWAIGTGKTASPEQAQAVHACLRQFL-AKDDPDIAQSLRLLYGGSVKADNAALLFAQSDIDGGLIGGASLTADSFIAICQAAE 247
[Close]
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_SALTY (Triosephosphate isomerase OS=Salmonella typhimurium GN=tpiA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 9.338e-22
Identity = 62/116 (53.45%), Postives = 75/116 (64.66%), Query Frame = 1 
Query:   22 AGSTLDVVAAQTKAI--ADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 360
            AG T +V A Q  A+      ++    V+AYEPVWAIGTGK ATPAQAQ VH  +R  + A    +IA    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+AE
Sbjct:  136 AGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
[Close]
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_SALSV (Triosephosphate isomerase OS=Salmonella schwarzengrund (strain CVM19633) GN=tpiA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 9.338e-22
Identity = 62/116 (53.45%), Postives = 75/116 (64.66%), Query Frame = 1 
Query:   22 AGSTLDVVAAQTKAI--ADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 360
            AG T +V A Q  A+      ++    V+AYEPVWAIGTGK ATPAQAQ VH  +R  + A    +IA    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+AE
Sbjct:  136 AGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
[Close]
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_SALPK (Triosephosphate isomerase OS=Salmonella paratyphi A (strain AKU_12601) GN=tpiA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 9.338e-22
Identity = 62/116 (53.45%), Postives = 75/116 (64.66%), Query Frame = 1 
Query:   22 AGSTLDVVAAQTKAI--ADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 360
            AG T +V A Q  A+      ++    V+AYEPVWAIGTGK ATPAQAQ VH  +R  + A    +IA    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+AE
Sbjct:  136 AGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
[Close]
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_SALPB (Triosephosphate isomerase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=tpiA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 9.338e-22
Identity = 62/116 (53.45%), Postives = 75/116 (64.66%), Query Frame = 1 
Query:   22 AGSTLDVVAAQTKAI--ADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 360
            AG T +V A Q  A+      ++    V+AYEPVWAIGTGK ATPAQAQ VH  +R  + A    +IA    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+AE
Sbjct:  136 AGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
[Close]
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_SALPA (Triosephosphate isomerase OS=Salmonella paratyphi A GN=tpiA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 9.338e-22
Identity = 62/116 (53.45%), Postives = 75/116 (64.66%), Query Frame = 1 
Query:   22 AGSTLDVVAAQTKAI--ADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 360
            AG T +V A Q  A+      ++    V+AYEPVWAIGTGK ATPAQAQ VH  +R  + A    +IA    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+AE
Sbjct:  136 AGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
[Close]
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_SALNS (Triosephosphate isomerase OS=Salmonella newport (strain SL254) GN=tpiA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 9.338e-22
Identity = 62/116 (53.45%), Postives = 75/116 (64.66%), Query Frame = 1 
Query:   22 AGSTLDVVAAQTKAI--ADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 360
            AG T +V A Q  A+      ++    V+AYEPVWAIGTGK ATPAQAQ VH  +R  + A    +IA    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+AE
Sbjct:  136 AGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
[Close]
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_SALHS (Triosephosphate isomerase OS=Salmonella heidelberg (strain SL476) GN=tpiA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 9.338e-22
Identity = 62/116 (53.45%), Postives = 75/116 (64.66%), Query Frame = 1 
Query:   22 AGSTLDVVAAQTKAI--ADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 360
            AG T +V A Q  A+      ++    V+AYEPVWAIGTGK ATPAQAQ VH  +R  + A    +IA    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+AE
Sbjct:  136 AGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
[Close]
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_SALG2 (Triosephosphate isomerase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=tpiA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 9.338e-22
Identity = 62/116 (53.45%), Postives = 75/116 (64.66%), Query Frame = 1 
Query:   22 AGSTLDVVAAQTKAI--ADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 360
            AG T +V A Q  A+      ++    V+AYEPVWAIGTGK ATPAQAQ VH  +R  + A    +IA    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+AE
Sbjct:  136 AGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
The following BLAST results are available for this feature:
BLAST of EY756590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_CHLCH7.150e-2249.57Triosephosphate isomerase OS=Chlorobium chlorochro... [more]
TPIS_ALCBS7.150e-2249.15Triosephosphate isomerase OS=Alcanivorax borkumens... [more]
TPIS_SALTY9.338e-2253.45Triosephosphate isomerase OS=Salmonella typhimuriu... [more]
TPIS_SALSV9.338e-2253.45Triosephosphate isomerase OS=Salmonella schwarzeng... [more]
TPIS_SALPK9.338e-2253.45Triosephosphate isomerase OS=Salmonella paratyphi ... [more]
TPIS_SALPB9.338e-2253.45Triosephosphate isomerase OS=Salmonella paratyphi ... [more]
TPIS_SALPA9.338e-2253.45Triosephosphate isomerase OS=Salmonella paratyphi ... [more]
TPIS_SALNS9.338e-2253.45Triosephosphate isomerase OS=Salmonella newport (s... [more]
TPIS_SALHS9.338e-2253.45Triosephosphate isomerase OS=Salmonella heidelberg... [more]
TPIS_SALG29.338e-2253.45Triosephosphate isomerase OS=Salmonella gallinarum... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756590 ID=EY756590; Name=EY756590; organism=Citrus sinensis; type=EST; length=574bp
TTCCGTCGACCCACGCGTCCGGCAGGATCTACTCTGGATGTTGTTGCTGC
ACAAACTAAAGCAATCGCAGATCGAGTCTCAAGCTGTTCAACCATTGTTT
TGGCCTATGAACCTGTGTGGGCTATTGGAACTGGGAAGGTTGCCACTCCA
GCGCAGGCTCAAGAAGTACATTTTGAACTGAGGAAATGGCTTTTTGCAAA
CACCAGTCCTGAAATTGCTGCAGCAACACGGATCATCTACGGAGGATCCG
TAAATGGTGCAAACTGCAAGGAATTGGCTGCACAGCCTGATGTTGACGGA
TTTTTGGTTGGTGGTGCTTCGTTGAAGCCGGAGTTCATTGACATCATCAA
ATCTGCTGAGCTGAAGTAAAATTCTTGAGCTTTATTTCAAGGGCAGTTTG
CTGATGAAGTATTTACTGTTTGTGGATATATAGAATACGTTTGGTATAAT
TTCAGAATTACTTTTGTTTTTGATAAGCGCGACCAACTGAAACCTTTTTT
TAAACTTTTTTAATTATCTTTGTTTCCTAAGTGTTGGAGTTGAATAAGTC
TTATGTAGTGTTTACCTGCNNNNN
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