EY756590

Overview
NameEY756590
Unique NameEY756590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4526 contig Csv1_Contig4526:459..1031. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_BOVIN (Triosephosphate isomerase OS=Bos taurus GN=TPI1 PE=2 SV=3)

HSP 1 Score: 159.458 bits (402), Expect = 1.098e-38
Identity = 80/115 (69.57%), Postives = 89/115 (77.39%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAE 360
            R AG T  VV  QTK IAD V   S +VLAYEPVWAIGTGK ATP QAQEVH +LR WL +N S  +A + RIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII + +
Sbjct:  135 REAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSARIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINAKQ 249          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_CHICK (Triosephosphate isomerase OS=Gallus gallus GN=TPI1 PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 3.194e-38
Identity = 80/113 (70.80%), Postives = 89/113 (78.76%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 354
            R AG T  VV  QTKAIAD V   S +VLAYEPVWAIGTGK ATP QAQEVH +LR WL ++ S  +A +TRIIYGGSV G NCKELA+Q DVDGFLVGGASLKPEF+DII +
Sbjct:  134 REAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPEFVDIINA 246          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_ORYLA (Triosephosphate isomerase OS=Oryzias latipes GN=tpi1 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.585e-37
Identity = 77/113 (68.14%), Postives = 89/113 (78.76%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 354
            R AG+T DV+ AQT+ IA+ V     +VLAYEPVWAIGTGK ATP QAQEVH +LR W  AN S E++ + RIIYGGSV  ANC+ELA+Q DVDGFLVGGASLKPEFIDII +
Sbjct:  134 REAGTTEDVIFAQTQVIAENVMDWEKVVLAYEPVWAIGTGKTATPEQAQEVHEKLRAWFRANISEEVSDSLRIIYGGSVTAANCRELASQTDVDGFLVGGASLKPEFIDIINA 246          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_XENLA (Triosephosphate isomerase OS=Xenopus laevis GN=tpi1 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.071e-37
Identity = 77/113 (68.14%), Postives = 87/113 (76.99%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 354
            R AG T  VV  QTKAIAD V   S +VLAYEPVWAIGTGK ATP QAQEVH +LR+W+  N S  +A + RIIYGGSV G  C+ELA QPD+DGFLVGGASLKPEFI+II +
Sbjct:  134 REAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPEQAQEVHKKLREWVKTNVSEGVAQSVRIIYGGSVTGGTCRELAGQPDIDGFLVGGASLKPEFIEIINA 246          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_CULTA (Triosephosphate isomerase OS=Culex tarsalis GN=Tpi PE=1 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 3.532e-37
Identity = 75/115 (65.22%), Postives = 88/115 (76.52%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAE 360
            R AG T  V   QTKAIAD+V   S +V+AYEPVWAIGTGK A+P QAQEVH  LRKW   N S +++AA RI YGGSV  ANC+ELAA+PD+DGFLVGGASLKPEFI I+ + +
Sbjct:  133 REAGQTEAVCFRQTKAIADKVKDWSNVVIAYEPVWAIGTGKTASPEQAQEVHAALRKWFTENVSADVSAAIRIQYGGSVTAANCRELAAKPDIDGFLVGGASLKPEFIQIVNARQ 247          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPISB_DANRE (Triosephosphate isomerase B OS=Danio rerio GN=tpi1b PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.024e-37
Identity = 78/113 (69.03%), Postives = 87/113 (76.99%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 354
            R AG T  VV AQTK IAD V   S +VLAYEPVWAIGTGK A+P QAQEVH +LR+WL  N S  +A + RIIYGGSV G  CKELA+Q D+DGFLVGGASLKPEFIDII +
Sbjct:  134 REAGITEKVVFAQTKFIADNVKDWSKVVLAYEPVWAIGTGKTASPQQAQEVHDKLRQWLKTNVSEAVANSVRIIYGGSVTGGTCKELASQKDLDGFLVGGASLKPEFIDIINA 246          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_PIG (Triosephosphate isomerase OS=Sus scrofa GN=TPI1 PE=2 SV=4)

HSP 1 Score: 150.599 bits (379), Expect = 5.100e-36
Identity = 76/113 (67.26%), Postives = 85/113 (75.22%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 354
            R AG T  VV  QTK IAD V   + +VLAYEPVWAIGTGK ATP QAQEVH +LR WL  +    +A +TRIIYGGSV GA CKELA+QPDVDGF V GASLKPEF+DII +
Sbjct:  135 REAGITEKVVFEQTKVIADNVKDWNKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKTHVPEAVAHSTRIIYGGSVTGATCKELASQPDVDGFRVSGASLKPEFVDIINA 247          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIC_SPIOL (Triosephosphate isomerase, chloroplastic OS=Spinacia oleracea GN=TPIP1 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.938e-35
Identity = 76/118 (64.41%), Postives = 85/118 (72.03%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSAELK 366
            R AG T DV   Q KA AD + S   +V+AYEPVWAIGTGKVA+P QAQEVH  +R WL  N S E+A+ TRIIYGGSVNG NC ELA Q D+DGFLVGGASLK PEF  I+ S   K
Sbjct:  201 REAGKTFDVCYQQLKAFADALPSWDNVVVAYEPVWAIGTGKVASPDQAQEVHVAVRDWLKKNVSEEVASKTRIIYGGSVNGGNCAELAKQEDIDGFLVGGASLKGPEFATIVNSVTAK 318          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_PARBA (Triosephosphate isomerase OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=TPI1 PE=1 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 5.639e-35
Identity = 73/115 (63.48%), Postives = 86/115 (74.78%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSC--STIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 354
            R AG T+DVV  Q  A+A+ VS    + +V+AYEP+WAIGTGKVAT  QAQEVH  +RKWL    SPE A   R+IYGGSV   NC++LAAQPDVDGFLVGGASLKP F+DII +
Sbjct:  133 REAGKTIDVVTRQLDAVAEEVSPAEWNKVVIAYEPIWAIGTGKVATTEQAQEVHASIRKWLNEKISPEAAENIRVIYGGSVTENNCRDLAAQPDVDGFLVGGASLKPAFVDIINA 247          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_GRAVE (Triosephosphate isomerase, cytosolic (Fragment) OS=Gracilaria verrucosa GN=TPI1 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.639e-35
Identity = 67/113 (59.29%), Postives = 90/113 (79.65%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 354
            R +G T+ V   Q +A++D +S  S +V+AYEPVWAIGTGKVATP QA++VH  +R WL  N SP++AA+TRI+YGGSV+ ANC+ LA QP++DGFLVGGAS+KP F++I+ S
Sbjct:  129 RESGQTIAVCERQLQALSDAISDWSDVVIAYEPVWAIGTGKVATPEQAEQVHEAVRAWLANNVSPQVAASTRILYGGSVSPANCESLAKQPNIDGFLVGGASMKPTFLEIVDS 241          
The following BLAST results are available for this feature:
BLAST of EY756590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_BOVIN1.098e-3869.57Triosephosphate isomerase OS=Bos taurus GN=TPI1 PE... [more]
TPIS_CHICK3.194e-3870.80Triosephosphate isomerase OS=Gallus gallus GN=TPI1... [more]
TPIS_ORYLA1.585e-3768.14Triosephosphate isomerase OS=Oryzias latipes GN=tp... [more]
TPIS_XENLA2.071e-3768.14Triosephosphate isomerase OS=Xenopus laevis GN=tpi... [more]
TPIS_CULTA3.532e-3765.22Triosephosphate isomerase OS=Culex tarsalis GN=Tpi... [more]
TPISB_DANRE6.024e-3769.03Triosephosphate isomerase B OS=Danio rerio GN=tpi1... [more]
TPIS_PIG5.100e-3667.26Triosephosphate isomerase OS=Sus scrofa GN=TPI1 PE... [more]
TPIC_SPIOL1.938e-3564.41Triosephosphate isomerase, chloroplastic OS=Spinac... [more]
TPIS_PARBA5.639e-3563.48Triosephosphate isomerase OS=Paracoccidioides bras... [more]
TPIS_GRAVE5.639e-3559.29Triosephosphate isomerase, cytosolic (Fragment) OS... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756590 ID=EY756590; Name=EY756590; organism=Citrus sinensis; type=EST; length=574bp
TTCCGTCGACCCACGCGTCCGGCAGGATCTACTCTGGATGTTGTTGCTGC
ACAAACTAAAGCAATCGCAGATCGAGTCTCAAGCTGTTCAACCATTGTTT
TGGCCTATGAACCTGTGTGGGCTATTGGAACTGGGAAGGTTGCCACTCCA
GCGCAGGCTCAAGAAGTACATTTTGAACTGAGGAAATGGCTTTTTGCAAA
CACCAGTCCTGAAATTGCTGCAGCAACACGGATCATCTACGGAGGATCCG
TAAATGGTGCAAACTGCAAGGAATTGGCTGCACAGCCTGATGTTGACGGA
TTTTTGGTTGGTGGTGCTTCGTTGAAGCCGGAGTTCATTGACATCATCAA
ATCTGCTGAGCTGAAGTAAAATTCTTGAGCTTTATTTCAAGGGCAGTTTG
CTGATGAAGTATTTACTGTTTGTGGATATATAGAATACGTTTGGTATAAT
TTCAGAATTACTTTTGTTTTTGATAAGCGCGACCAACTGAAACCTTTTTT
TAAACTTTTTTAATTATCTTTGTTTCCTAAGTGTTGGAGTTGAATAAGTC
TTATGTAGTGTTTACCTGCNNNNN
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