EY756590

Overview
NameEY756590
Unique NameEY756590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIC_ARATH (Triosephosphate isomerase, chloroplastic OS=Arabidopsis thaliana GN=TIM PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 7.364e-35
Identity = 77/118 (65.25%), Postives = 85/118 (72.03%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSAELK 366
            R AG T DV  AQ KA AD V S   IV+AYEPVWAIGTGKVA+P QAQEVH  +R WL  N S E+A+ TRIIYGGSVNG N  ELA + D+DGFLVGGASLK PEF  I+ S   K
Sbjct:  194 REAGKTFDVCFAQLKAFADAVPSWDNIVVAYEPVWAIGTGKVASPQQAQEVHVAVRGWLKKNVSEEVASKTRIIYGGSVNGGNSAELAKEEDIDGFLVGGASLKGPEFATIVNSVTSK 311          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_DROYA (Triosephosphate isomerase OS=Drosophila yakuba GN=Tpi PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.256e-34
Identity = 72/115 (62.61%), Postives = 86/115 (74.78%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAE 360
            R AG T +VVA Q  A A ++     +V+AYEPVWAIGTGK ATP QAQEVH  LR+WL  N S E++A+ RI YGGSV  AN KELA +PD+DGFLVGGASLKPEF+DII + +
Sbjct:  133 REAGKTNEVVARQMCAYAQKIKDWKNVVVAYEPVWAIGTGKTATPDQAQEVHAFLRQWLSDNISKEVSASLRIQYGGSVTAANAKELAKKPDIDGFLVGGASLKPEFVDIINARQ 247          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_DROSI (Triosephosphate isomerase OS=Drosophila simulans GN=Tpi PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.256e-34
Identity = 72/115 (62.61%), Postives = 86/115 (74.78%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAE 360
            R AG T +VVA Q  A A ++     +V+AYEPVWAIGTGK ATP QAQEVH  LR+WL  N S E++A+ RI YGGSV  AN KELA +PD+DGFLVGGASLKPEF+DII + +
Sbjct:  133 REAGKTNEVVARQMCAYAQKIKDWKNVVVAYEPVWAIGTGKTATPDQAQEVHAFLRQWLSDNISKEVSASLRIQYGGSVTAANAKELAKKPDIDGFLVGGASLKPEFVDIINARQ 247          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_LATCH (Triosephosphate isomerase OS=Latimeria chalumnae PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.641e-34
Identity = 72/109 (66.06%), Postives = 84/109 (77.06%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFID 342
            R AG T  VV   T+ IAD V   S +VLAYEPVWAIGTGK A+P Q+QE+H +LRKWL  N S  +A + RIIYGGSV GA CKELA++PDVDGFLVGGASLKPEF++
Sbjct:  133 REAGITEGVVFEVTEVIADDVKDWSKVVLAYEPVWAIGTGKTASPQQSQELHGKLRKWLKENVSETVADSVRIIYGGSVTGATCKELASEPDVDGFLVGGASLKPEFVE 241          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIC_FRAAN (Triosephosphate isomerase, chloroplastic OS=Fragaria ananassa GN=TPI PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.798e-34
Identity = 75/118 (63.56%), Postives = 85/118 (72.03%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSAELK 366
            R AG T DV   Q KA AD V S   IV+AYEPVWAIGTGKVA+P QAQEVH  +R+WL  N S E+A+ TRIIYGGSVNG N  ELA + D+DGFLVGGASLK PEF  I+ +   K
Sbjct:  193 REAGKTFDVCYEQLKAFADAVPSWENIVVAYEPVWAIGTGKVASPQQAQEVHVAVREWLKKNVSAEVASKTRIIYGGSVNGGNSAELAKEEDIDGFLVGGASLKGPEFATIVNAVTSK 310          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_DROME (Triosephosphate isomerase OS=Drosophila melanogaster GN=Tpi PE=1 SV=3)

HSP 1 Score: 144.436 bits (363), Expect = 3.655e-34
Identity = 71/115 (61.74%), Postives = 86/115 (74.78%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAE 360
            R AG T +VVA Q  A A ++     +V+AYEPVWAIGTG+ ATP QAQEVH  LR+WL  N S E++A+ RI YGGSV  AN KELA +PD+DGFLVGGASLKPEF+DII + +
Sbjct:  133 REAGKTNEVVARQMCAYAQKIKDWKNVVVAYEPVWAIGTGQTATPDQAQEVHAFLRQWLSDNISKEVSASLRIQYGGSVTAANAKELAKKPDIDGFLVGGASLKPEFVDIINARQ 247          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_NEUCR (Triosephosphate isomerase OS=Neurospora crassa GN=tpi-1 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.063e-33
Identity = 67/116 (57.76%), Postives = 84/116 (72.41%), Query Frame = 1
Query:    7 RPTRPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 354
            + TR AG T+  V  Q  A+A  ++    +V+AYEP+WAIGTG VAT  QAQEVH  +R WL  N S ++A  TRI+YGGSVN  NCK+LA + D+DGFLVGGASLKPEF+DII +
Sbjct:  131 KDTRQAGETIKFVENQLAALAKEINDWKNVVIAYEPIWAIGTGLVATKEQAQEVHAAIRSWLKQNVSDKVAEETRILYGGSVNAKNCKDLAKEQDIDGFLVGGASLKPEFVDIINA 246          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_SCHPO (Triosephosphate isomerase OS=Schizosaccharomyces pombe GN=tpi1 PE=1 SV=4)

HSP 1 Score: 142.124 bits (357), Expect = 1.814e-33
Identity = 69/111 (62.16%), Postives = 80/111 (72.07%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDII 348
            R A  T++VV  Q  AIAD+V + S IV+AYEPVWAIGTGK ATP QAQEVH E+RKW        +A   R+IYGGSVNG NCKE     D+DGFLVGGASLKPEF +I+
Sbjct:  134 REANETINVVVRQLNAIADKVQNWSKIVIAYEPVWAIGTGKTATPEQAQEVHAEIRKWATNKLGASVAEGLRVIYGGSVNGGNCKEFLKFHDIDGFLVGGASLKPEFHNIV 244          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIC_SECCE (Triosephosphate isomerase, chloroplastic OS=Secale cereale PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.814e-33
Identity = 71/118 (60.17%), Postives = 84/118 (71.19%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSAELK 366
            R AG T DV   Q KA AD ++  + +V+AYEPVWAIGTGKVA+P QAQEVH  +R WL  N S ++A+  RIIYGGSVN ANC ELA + D+DGFLVGGASLK P+F  I  S   K
Sbjct:  177 REAGKTFDVCFKQMKAFADNITDWTNVVIAYEPVWAIGTGKVASPEQAQEVHAAVRDWLKTNVSADVASTVRIIYGGSVNAANCAELAKKEDIDGFLVGGASLKGPDFATICNSVTSK 294          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPISL_HUMAN (Putative triosephosphate isomerase-like protein LOC286016 OS=Homo sapiens PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 3.094e-33
Identity = 71/115 (61.74%), Postives = 83/115 (72.17%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAE 360
            R AG T  VV  QTK IAD V   S ++LAY+PVWA GTGK ATP QAQEVH +LR WL +N S  +A +T IIYGGSV  A CKELA+QPDV  FL+ G SLKPEF+DII + +
Sbjct:  116 REAGITEKVVFEQTKVIADNVKDWSKVILAYDPVWATGTGKTATPQQAQEVHKKLRGWLKSNISDAVAQSTGIIYGGSVTKATCKELASQPDVAAFLMSGVSLKPEFVDIINAKQ 230          
The following BLAST results are available for this feature:
BLAST of EY756590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIC_ARATH7.364e-3565.25Triosephosphate isomerase, chloroplastic OS=Arabid... [more]
TPIS_DROYA1.256e-3462.61Triosephosphate isomerase OS=Drosophila yakuba GN=... [more]
TPIS_DROSI1.256e-3462.61Triosephosphate isomerase OS=Drosophila simulans G... [more]
TPIS_LATCH1.641e-3466.06Triosephosphate isomerase OS=Latimeria chalumnae P... [more]
TPIC_FRAAN2.798e-3463.56Triosephosphate isomerase, chloroplastic OS=Fragar... [more]
TPIS_DROME3.655e-3461.74Triosephosphate isomerase OS=Drosophila melanogast... [more]
TPIS_NEUCR1.063e-3357.76Triosephosphate isomerase OS=Neurospora crassa GN=... [more]
TPIS_SCHPO1.814e-3362.16Triosephosphate isomerase OS=Schizosaccharomyces p... [more]
TPIC_SECCE1.814e-3360.17Triosephosphate isomerase, chloroplastic OS=Secale... [more]
TPISL_HUMAN3.094e-3361.74Putative triosephosphate isomerase-like protein LO... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756590 ID=EY756590; Name=EY756590; organism=Citrus sinensis; type=EST; length=574bp
TTCCGTCGACCCACGCGTCCGGCAGGATCTACTCTGGATGTTGTTGCTGC
ACAAACTAAAGCAATCGCAGATCGAGTCTCAAGCTGTTCAACCATTGTTT
TGGCCTATGAACCTGTGTGGGCTATTGGAACTGGGAAGGTTGCCACTCCA
GCGCAGGCTCAAGAAGTACATTTTGAACTGAGGAAATGGCTTTTTGCAAA
CACCAGTCCTGAAATTGCTGCAGCAACACGGATCATCTACGGAGGATCCG
TAAATGGTGCAAACTGCAAGGAATTGGCTGCACAGCCTGATGTTGACGGA
TTTTTGGTTGGTGGTGCTTCGTTGAAGCCGGAGTTCATTGACATCATCAA
ATCTGCTGAGCTGAAGTAAAATTCTTGAGCTTTATTTCAAGGGCAGTTTG
CTGATGAAGTATTTACTGTTTGTGGATATATAGAATACGTTTGGTATAAT
TTCAGAATTACTTTTGTTTTTGATAAGCGCGACCAACTGAAACCTTTTTT
TAAACTTTTTTAATTATCTTTGTTTCCTAAGTGTTGGAGTTGAATAAGTC
TTATGTAGTGTTTACCTGCNNNNN
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