EY756590

Overview
NameEY756590
Unique NameEY756590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_LACDL (Triosephosphate isomerase OS=Lactobacillus delbrueckii subsp. lactis GN=tpiA PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.672e-18
Identity = 52/108 (48.15%), Postives = 71/108 (65.74%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSS--CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 333
            R AG   + V +Q KA  + ++S   S +V+AYEP+WAIGTGK A+  QA+E+   +R+ +    + E A   RI YGGSV  AN KEL A+P++DG LVGGASL P+
Sbjct:  135 REAGKEKEWVVSQIKADLEGLTSEQVSKLVIAYEPIWAIGTGKTASSDQAEEMCKTIRETVKDLYNEETAENVRIQYGGSVKPANIKELMAKPNIDGGLVGGASLVPD 242          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_CUPTR (Triosephosphate isomerase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=tpiA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.672e-18
Identity = 54/108 (50.00%), Postives = 65/108 (60.19%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADR--VSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 333
            R AG T  VV  Q +A+ +   V     +VLAYEPVWAIGTGK AT  QAQ VH  LR  + A  +  +A    I+YGGSV   N  EL +  D+DG L+GGASLK E
Sbjct:  133 REAGETEAVVGRQLQAVLEALTVEQLGRVVLAYEPVWAIGTGKTATSEQAQAVHAFLRGQVAARDA-GVAGRMAILYGGSVKPDNAAELFSMTDIDGGLIGGASLKSE 239          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_CHLMU (Triosephosphate isomerase OS=Chlamydia muridarum GN=tpiA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.672e-18
Identity = 52/111 (46.85%), Postives = 66/111 (59.46%), Query Frame = 1
Query:   22 AGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIK 351
            AG+T D++  Q      R+   +  +LAYEPVWAIGTGKVA P   QE+H   R  +    S + A  T I+YGGSV   N + L   PDV+G LVGGASL  E F+ II+
Sbjct:  155 AGATQDILLEQLTVGLSRLPEHAPFILAYEPVWAIGTGKVANPDLVQEIHAFCRNVVKDLISKDAAERTPILYGGSVKADNTRALTLCPDVNGLLVGGASLSVESFLAIIQ 265          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_POLNS (Triosephosphate isomerase OS=Polynucleobacter necessarius (strain STIR1) GN=tpiA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.796e-18
Identity = 52/105 (49.52%), Postives = 69/105 (65.71%), Query Frame = 1
Query:   43 VAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDIIKS 354
            VA Q   + DR+  C   ++AYEPVWAIGTGKVA+   AQ++H  +R  L A  + ++A+   I+YGGSV   N  EL A PD+DG LVGGASL P +F+ I K+
Sbjct:  152 VAKQVGVLQDRLVDC---LIAYEPVWAIGTGKVASAQVAQDMHRAIRLQL-AEFNEDVASHVGILYGGSVKPDNAVELFAMPDIDGGLVGGASLSPQDFLAICKA 252          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_STRSY (Triosephosphate isomerase OS=Streptococcus suis (strain 05ZYH33) GN=tpiA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.263e-18
Identity = 54/112 (48.21%), Postives = 69/112 (61.61%), Query Frame = 1
Query:   13 TRPAGSTLDVVAAQTKAI-----ADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 333
            T  AG  ++ V AQ  A      AD+V+S   +V+AYEP+WAIGTGK AT   AQ +   +R  + A+   E+A   R+ YGGSVN +N  E  A PDVDG LVGGASL+ E
Sbjct:  134 TYEAGKAVEFVGAQVSAALKDLTADQVAS---LVIAYEPIWAIGTGKSATKDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVNPSNVAEYMACPDVDGALVGGASLEAE 242          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_STRS2 (Triosephosphate isomerase OS=Streptococcus suis (strain 98HAH33) GN=tpiA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.263e-18
Identity = 54/112 (48.21%), Postives = 69/112 (61.61%), Query Frame = 1
Query:   13 TRPAGSTLDVVAAQTKAI-----ADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 333
            T  AG  ++ V AQ  A      AD+V+S   +V+AYEP+WAIGTGK AT   AQ +   +R  + A+   E+A   R+ YGGSVN +N  E  A PDVDG LVGGASL+ E
Sbjct:  134 TYEAGKAVEFVGAQVSAALKDLTADQVAS---LVIAYEPIWAIGTGKSATKDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVNPSNVAEYMACPDVDGALVGGASLEAE 242          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_RHOP5 (Triosephosphate isomerase OS=Rhodopseudomonas palustris (strain BisA53) GN=tpiA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.263e-18
Identity = 52/104 (50.00%), Postives = 62/104 (59.62%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 327
            R AG TLDVV  Q        ++    V+AYEPVWAIGTG   T    ++VH  +R  L      E  AA RI+YGGSV  +N KEL A P+V+G LVGGASLK
Sbjct:  139 RDAGQTLDVVGRQLAGSLPDGATAENTVVAYEPVWAIGTGLTPTANDVEQVHKFIRDCLTKRFGGE-GAAVRILYGGSVKPSNAKELMAVPEVNGALVGGASLK 241          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_HYPNA (Triosephosphate isomerase OS=Hyphomonas neptunium (strain ATCC 15444) GN=tpiA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.263e-18
Identity = 51/115 (44.35%), Postives = 67/115 (58.26%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 357
            R AG  L V+  Q        +  + IV+AYEPVWAIGTG+VAT  Q  EVH  +R  L      +    TRI+YGGS+N  N  E+ A  +V+G L+GGASLK  +F+ I + A
Sbjct:  134 RDAGEVLTVITTQMAESIPEGAEAAAIVIAYEPVWAIGTGRVATSEQIAEVHTSIRN-LLVRRFGDAGRTTRILYGGSMNPGNAAEILAVAEVNGGLIGGASLKAADFLAIYRLA 247          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_FRATM (Triosephosphate isomerase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=tpiA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.263e-18
Identity = 52/117 (44.44%), Postives = 72/117 (61.54%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVS--SCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDIIKSA 357
            R +G    V+A Q   I + +S    + +V+AYEPVWAIGTG VA+  Q QE H  +R  L A    ++A   +I+YGGS+   N K++ + P+VDG L+GGASLK  EF +II  A
Sbjct:  132 RQSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETHQFIRS-LLAKVDEKLAKNIKIVYGGSLKAENAKDILSLPNVDGGLIGGASLKAVEFNEIINQA 247          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_FLAPJ (Triosephosphate isomerase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=tpiA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.263e-18
Identity = 45/90 (50.00%), Postives = 63/90 (70.00%), Query Frame = 1
Query:   79 SSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDII 348
            S+ + I+LAYEPVWAIGTG+ A+P QAQE+H  +R+ +      +IA    I+YGGSV   N KE+ ++PDVDG L+GGA+LK +   +I
Sbjct:  157 SAWANIILAYEPVWAIGTGETASPEQAQEMHEFIRETVRKVFGSDIAEDVSILYGGSVKPDNAKEIFSKPDVDGGLIGGAALKADDFVVI 246          
The following BLAST results are available for this feature:
BLAST of EY756590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_LACDL3.672e-1848.15Triosephosphate isomerase OS=Lactobacillus delbrue... [more]
TPIS_CUPTR3.672e-1850.00Triosephosphate isomerase OS=Cupriavidus taiwanens... [more]
TPIS_CHLMU3.672e-1846.85Triosephosphate isomerase OS=Chlamydia muridarum G... [more]
TPIS_POLNS4.796e-1849.52Triosephosphate isomerase OS=Polynucleobacter nece... [more]
TPIS_STRSY6.263e-1848.21Triosephosphate isomerase OS=Streptococcus suis (s... [more]
TPIS_STRS26.263e-1848.21Triosephosphate isomerase OS=Streptococcus suis (s... [more]
TPIS_RHOP56.263e-1850.00Triosephosphate isomerase OS=Rhodopseudomonas palu... [more]
TPIS_HYPNA6.263e-1844.35Triosephosphate isomerase OS=Hyphomonas neptunium ... [more]
TPIS_FRATM6.263e-1844.44Triosephosphate isomerase OS=Francisella tularensi... [more]
TPIS_FLAPJ6.263e-1850.00Triosephosphate isomerase OS=Flavobacterium psychr... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756590 ID=EY756590; Name=EY756590; organism=Citrus sinensis; type=EST; length=574bp
TTCCGTCGACCCACGCGTCCGGCAGGATCTACTCTGGATGTTGTTGCTGC
ACAAACTAAAGCAATCGCAGATCGAGTCTCAAGCTGTTCAACCATTGTTT
TGGCCTATGAACCTGTGTGGGCTATTGGAACTGGGAAGGTTGCCACTCCA
GCGCAGGCTCAAGAAGTACATTTTGAACTGAGGAAATGGCTTTTTGCAAA
CACCAGTCCTGAAATTGCTGCAGCAACACGGATCATCTACGGAGGATCCG
TAAATGGTGCAAACTGCAAGGAATTGGCTGCACAGCCTGATGTTGACGGA
TTTTTGGTTGGTGGTGCTTCGTTGAAGCCGGAGTTCATTGACATCATCAA
ATCTGCTGAGCTGAAGTAAAATTCTTGAGCTTTATTTCAAGGGCAGTTTG
CTGATGAAGTATTTACTGTTTGTGGATATATAGAATACGTTTGGTATAAT
TTCAGAATTACTTTTGTTTTTGATAAGCGCGACCAACTGAAACCTTTTTT
TAAACTTTTTTAATTATCTTTGTTTCCTAAGTGTTGGAGTTGAATAAGTC
TTATGTAGTGTTTACCTGCNNNNN
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