EY756590

Overview
NameEY756590
Unique NameEY756590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_LACSS (Triosephosphate isomerase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=tpiA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.380e-17
Identity = 54/118 (45.76%), Postives = 76/118 (64.41%), Query Frame = 1
Query:   13 TRPAGSTLDVVAAQ-TKAI----ADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDII 348
            TR AG   + V+ Q T+ +    AD+VSS   +V+AYEP+WAIGTGK A+  QAQE+   +R+ +       +A   RI YGGSV  AN KE+  + D+DG LVGGAS++P  F+D++
Sbjct:  133 TREAGKAEEWVSNQVTEGLKGLSADQVSS---MVIAYEPIWAIGTGKTASADQAQEICAVVRQTVAKLYDQTVADKVRIQYGGSVKPANVKEIMGKEDIDGGLVGGASMEPASFLDLV 247          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_GEOMG (Triosephosphate isomerase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=tpiA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.380e-17
Identity = 52/108 (48.15%), Postives = 66/108 (61.11%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTK-AIADRV-SSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 333
            R A  T +V+  Q +  +A       + IV+AYEPVWAIGTGK AT  QAQ  H  +RK +    + +IA   RI+YGGSV   N + L  QPD+DG LVGGASLK +
Sbjct:  134 READKTFEVLRTQIENGLAGLARGDLAKIVIAYEPVWAIGTGKTATDEQAQIAHAFIRKVVGELFTVQIAETIRILYGGSVKPENVRGLMNQPDIDGALVGGASLKAD 241          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_FRAP2 (Triosephosphate isomerase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=tpiA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.380e-17
Identity = 51/117 (43.59%), Postives = 69/117 (58.97%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVS--SCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 357
            R  G    V+  Q   I + +S    + +++AYEPVWAIGTG VA+  Q QE H  +R  L A     +A   +I+YGGS+   N K++ + PDVDG L+GGASLK  EF +II  A
Sbjct:  132 RQGGRLEKVLTTQLSLILENLSIEQLARVIIAYEPVWAIGTGVVASLEQVQETHQFIRS-LVAKVDENLAKNMKIVYGGSLKAENAKDILSLPDVDGGLIGGASLKASEFNEIINQA 247          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_CYTH3 (Triosephosphate isomerase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=tpiA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.380e-17
Identity = 52/116 (44.83%), Postives = 70/116 (60.34%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVS--SCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDIIKS 354
            R AG  ++ V AQ       +S      +V+AYEP+WAIGTG  A+  QAQE+H ++R+ L +     +A    I+YGGS+   N K L A  D+DG L+GGASLK  +FIDI KS
Sbjct:  135 REAGIHINFVNAQLTESLFHLSPEDFKKVVIAYEPIWAIGTGVTASDEQAQEMHAKIREHLASKYGAAVADEISILYGGSMKPDNAKGLLACKDIDGGLIGGASLKSRDFIDIAKS 250          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_AQUAE (Triosephosphate isomerase OS=Aquifex aeolicus GN=tpiA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.380e-17
Identity = 54/119 (45.38%), Postives = 67/119 (56.30%), Query Frame = 1
Query:    4 RRPTRPAGSTLDVVAAQTK-AIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKS 354
            ++  R AG T  V+  Q K A+         I +AYEPVWAIGTG  ATP  A EVH  +R  L    +P+    TRI+YGGSVN  N KE     +++G LVG ASL PE F  I+ S
Sbjct:  129 KKEEREAGMTFKVIETQIKLALTGVEEHTDKIDIAYEPVWAIGTGTPATPEDAVEVHTFIRN-LINQLNPKNEGKTRILYGGSVNPQNAKEFMKHEEINGLLVGTASLDPESFAKIVYS 246          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_STRCO (Triosephosphate isomerase OS=Streptomyces coelicolor GN=tpiA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.108e-17
Identity = 52/115 (45.22%), Postives = 70/115 (60.87%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSS--CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIK 351
            R AG+ ++   AQ +     +++    ++V+AYEPVWAIGTGKV     AQEV   +R  L    S E+A   RI YGGSV   N  E+ A+PD+DG LVGGASL   EF+ I++
Sbjct:  140 REAGNHVEHTLAQVEGGLKDLAAEQAESVVIAYEPVWAIGTGKVCGADDAQEVCAAIRGKLAELYSQELADKVRIQYGGSVKSGNVAEIMAKPDIDGALVGGASLDSDEFVKIVR 254          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_PROAC (Triosephosphate isomerase OS=Propionibacterium acnes GN=tpiA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.108e-17
Identity = 51/106 (48.11%), Postives = 65/106 (61.32%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSS--CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 327
            R AG  ++    Q KA  D + +   + +V+AYEP+WAIGTG+ AT   AQEV   +R+ +        A A RI YGGSV  AN  E+ A+PDVDG LVGGASLK
Sbjct:  141 RKAGKHVEHTVGQIKADLDGIPAEQVAKLVIAYEPIWAIGTGETATADDAQEVCQAIREAVKELYDAPTAEAVRIQYGGSVKPANVAEIMAKPDVDGALVGGASLK 246          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_PARUW (Triosephosphate isomerase OS=Protochlamydia amoebophila (strain UWE25) GN=tpiA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.108e-17
Identity = 49/114 (42.98%), Postives = 69/114 (60.53%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSS--CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDII 348
            R +G T  ++  Q +     +++    T+++AYEPVWAIG G+ A P  AQE+H   RK +    S E+A    I YGGSVN +N   L  QPD+DG L+GGASL  E F++I+
Sbjct:  137 RKSGETQQIIRTQIQECLAGLTAEDLKTLIIAYEPVWAIGNGQNAKPEGAQEIHQFCRKIIKEIFSEELAEQIVIQYGGSVNPSNAISLLKQPDIDGLLIGGASLSLETFVEIV 250          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_GEOUR (Triosephosphate isomerase OS=Geobacter uraniireducens (strain Rf4) GN=tpiA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.108e-17
Identity = 48/90 (53.33%), Postives = 59/90 (65.56%), Query Frame = 1
Query:   94 IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 360
            +++AYEPVWAIGTGK AT  QAQE H  +R  +      E A   RI+YGGSV   N K L AQ D+DG LVGGASLK + F  I++ +E
Sbjct:  162 VIIAYEPVWAIGTGKTATDDQAQEAHKFIRGVVAKLCDSESAENIRILYGGSVKPENVKGLMAQKDIDGALVGGASLKADSFAHIVRFSE 251          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_GEOKA (Triosephosphate isomerase OS=Geobacillus kaustophilus GN=tpiA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.108e-17
Identity = 53/116 (45.69%), Postives = 69/116 (59.48%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQT-KAIADRV-SSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDIIKS 354
            R AG T  VVA+Q  KA+A          V+AYEP+WAIGTGK +TP  A  V   +R  +     PE A A RI YGGSV   N ++  AQ  +DG LVGGASL+P  F+ ++++
Sbjct:  134 REAGQTNAVVASQVEKALAGLTPEQVKQAVIAYEPIWAIGTGKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKPDNIRDFLAQEQIDGALVGGASLEPASFLQLVEA 249          
The following BLAST results are available for this feature:
BLAST of EY756590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_LACSS2.380e-1745.76Triosephosphate isomerase OS=Lactobacillus sakei s... [more]
TPIS_GEOMG2.380e-1748.15Triosephosphate isomerase OS=Geobacter metalliredu... [more]
TPIS_FRAP22.380e-1743.59Triosephosphate isomerase OS=Francisella philomira... [more]
TPIS_CYTH32.380e-1744.83Triosephosphate isomerase OS=Cytophaga hutchinsoni... [more]
TPIS_AQUAE2.380e-1745.38Triosephosphate isomerase OS=Aquifex aeolicus GN=t... [more]
TPIS_STRCO3.108e-1745.22Triosephosphate isomerase OS=Streptomyces coelicol... [more]
TPIS_PROAC3.108e-1748.11Triosephosphate isomerase OS=Propionibacterium acn... [more]
TPIS_PARUW3.108e-1742.98Triosephosphate isomerase OS=Protochlamydia amoebo... [more]
TPIS_GEOUR3.108e-1753.33Triosephosphate isomerase OS=Geobacter uraniireduc... [more]
TPIS_GEOKA3.108e-1745.69Triosephosphate isomerase OS=Geobacillus kaustophi... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756590 ID=EY756590; Name=EY756590; organism=Citrus sinensis; type=EST; length=574bp
TTCCGTCGACCCACGCGTCCGGCAGGATCTACTCTGGATGTTGTTGCTGC
ACAAACTAAAGCAATCGCAGATCGAGTCTCAAGCTGTTCAACCATTGTTT
TGGCCTATGAACCTGTGTGGGCTATTGGAACTGGGAAGGTTGCCACTCCA
GCGCAGGCTCAAGAAGTACATTTTGAACTGAGGAAATGGCTTTTTGCAAA
CACCAGTCCTGAAATTGCTGCAGCAACACGGATCATCTACGGAGGATCCG
TAAATGGTGCAAACTGCAAGGAATTGGCTGCACAGCCTGATGTTGACGGA
TTTTTGGTTGGTGGTGCTTCGTTGAAGCCGGAGTTCATTGACATCATCAA
ATCTGCTGAGCTGAAGTAAAATTCTTGAGCTTTATTTCAAGGGCAGTTTG
CTGATGAAGTATTTACTGTTTGTGGATATATAGAATACGTTTGGTATAAT
TTCAGAATTACTTTTGTTTTTGATAAGCGCGACCAACTGAAACCTTTTTT
TAAACTTTTTTAATTATCTTTGTTTCCTAAGTGTTGGAGTTGAATAAGTC
TTATGTAGTGTTTACCTGCNNNNN
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