EY756590

Overview
NameEY756590
Unique NameEY756590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_TREPS (Triosephosphate isomerase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=tpiA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.302e-17
Identity = 53/114 (46.49%), Postives = 68/114 (59.65%), Query Frame = 1
Query:   22 AGSTLDVVAAQTKA-IADRVSSCS-TIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKS 354
            AG T +VV  Q +A +AD   S    + +AYEPVWAIGTGK ATPAQA  VH  +R  +       IA A  I YGGS+   N + L A+  +DG L+GGASL+   F+ I +S
Sbjct:  135 AGCTNEVVGTQVRAGMADVCGSLMHNVTVAYEPVWAIGTGKTATPAQANAVHAHIRSVVREMYGAAIAEALCIQYGGSMKAENARALLAEEHIDGGLIGGASLEAASFVPIARS 248          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_TREPA (Triosephosphate isomerase OS=Treponema pallidum GN=tpiA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.302e-17
Identity = 53/114 (46.49%), Postives = 68/114 (59.65%), Query Frame = 1
Query:   22 AGSTLDVVAAQTKA-IADRVSSCS-TIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKS 354
            AG T +VV  Q +A +AD   S    + +AYEPVWAIGTGK ATPAQA  VH  +R  +       IA A  I YGGS+   N + L A+  +DG L+GGASL+   F+ I +S
Sbjct:  135 AGCTNEVVGTQVRAGMADVCGSLMHNVTVAYEPVWAIGTGKTATPAQANAVHAHIRSVVREMYGAAIAEALCIQYGGSMKAENARALLAEEHIDGGLIGGASLEAASFVPIARS 248          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_STRPG (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=tpiA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.302e-17
Identity = 50/107 (46.73%), Postives = 66/107 (61.68%), Query Frame = 1
Query:   13 TRPAGSTLDVVAAQTKAIADRVSS--CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 327
            T  AG  ++ V AQ  A    +S+   +++VLAYEP+WAIGTGK AT   AQ +   +R  + A+   E+A   R+ YGGSV   N K+  A PDVDG LVGGASL+
Sbjct:  134 TYEAGKAVEFVGAQVSAALAGLSAEQVASLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLE 240          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_STRP6 (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M6 GN=tpiA PE=1 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 5.302e-17
Identity = 50/107 (46.73%), Postives = 66/107 (61.68%), Query Frame = 1
Query:   13 TRPAGSTLDVVAAQTKAIADRVSS--CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 327
            T  AG  ++ V AQ  A    +S+   +++VLAYEP+WAIGTGK AT   AQ +   +R  + A+   E+A   R+ YGGSV   N K+  A PDVDG LVGGASL+
Sbjct:  134 TYEAGKAVEFVGAQVSAALAGLSAEQVASLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLE 240          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_LEPBP (Triosephosphate isomerase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=tpiA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.302e-17
Identity = 54/118 (45.76%), Postives = 74/118 (62.71%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSS--CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRK---WLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIK 351
            R  G+T  V+  Q       ++S     +V+AYEPVWAIGTGKVATP +A+E H  +RK    LF   +  +A   +I+YGGSV   N KEL A+P++DG LVGGAS K + F+ ++K
Sbjct:  133 REKGNTFSVLEDQIGKGLKGITSDLFKNLVIAYEPVWAIGTGKVATPVEAEEAHAFIRKEIGKLFVG-ADLVAENIQILYGGSVKPDNIKELLAKPNIDGGLVGGASQKLDLFLGLLK 249          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_LEPBA (Triosephosphate isomerase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=tpiA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.302e-17
Identity = 54/118 (45.76%), Postives = 74/118 (62.71%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSS--CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRK---WLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIK 351
            R  G+T  V+  Q       ++S     +V+AYEPVWAIGTGKVATP +A+E H  +RK    LF   +  +A   +I+YGGSV   N KEL A+P++DG LVGGAS K + F+ ++K
Sbjct:  133 REKGNTFSVLEDQIGKGLKGITSDLFKNLVIAYEPVWAIGTGKVATPVEAEEAHAFIRKEIGKLFVG-ADLVAENIQILYGGSVKPDNIKELLAKPNIDGGLVGGASQKLDLFLGLLK 249          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_CLOTH (Triosephosphate isomerase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=tpiA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.302e-17
Identity = 51/106 (48.11%), Postives = 65/106 (61.32%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSS--CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 327
            R  G T ++V  Q K     +S+      V+AYEP+WAIGTGK AT  QA+EV   +R+ +      ++A A RI YGGSVN AN  EL   P++DG LVGGASLK
Sbjct:  134 REQGVTAELVRYQVKIALLGLSAEQVKEAVIAYEPIWAIGTGKTATNEQAEEVCGIIRECIKELYGQDVAEAIRIQYGGSVNAANAAELFNMPNIDGGLVGGASLK 239          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_BRAJA (Triosephosphate isomerase OS=Bradyrhizobium japonicum GN=tpiA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.302e-17
Identity = 50/113 (44.25%), Postives = 70/113 (61.95%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIK 351
            R AG TLD++  Q        S+ + +V+AYEPVWAIGTG   T    +++H  +R++L +  S +  A  RI+YGGSV  +N  EL A  +V+G LVGGASLK  +F+ I K
Sbjct:  137 RDAGQTLDILRGQLDGSLPDGSTAANLVVAYEPVWAIGTGLTPTVQDVEQIHGFIREFLTSRFSVD-GAKMRILYGGSVKPSNAAELMAVKNVNGALVGGASLKAADFLAIAK 248          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_BACST (Triosephosphate isomerase OS=Bacillus stearothermophilus GN=tpiA PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 5.302e-17
Identity = 53/116 (45.69%), Postives = 69/116 (59.48%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQT-KAIADRV-SSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDIIKS 354
            R AG T  VVA+Q  KA+A          V+AYEP+WAIGTGK +TP  A  V   +R  +     PE A A RI YGGSV   N ++  AQ  +DG LVGGASL+P  F+ ++++
Sbjct:  134 REAGQTNAVVASQVEKALAGLTPEQVKQAVIAYEPIWAIGTGKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKPDNIRDFLAQQQIDGPLVGGASLEPASFLQLVEA 249          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_VIBVY (Triosephosphate isomerase OS=Vibrio vulnificus (strain YJ016) GN=tpiA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.925e-17
Identity = 51/117 (43.59%), Postives = 65/117 (55.56%), Query Frame = 1
Query:   22 AGSTLDVVAAQTKAIADR--VSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAELK 366
            AG T  V A Q  A+ D   V + +  ++AYEP+WAIGTGK AT   AQ +H  +R  + A  +  +A    I YGGSV   N +   AQPD+DG LVGGASL  +    I  A  K
Sbjct:  138 AGETEAVCARQINAVIDAYGVEALNGAIIAYEPIWAIGTGKAATAEDAQRIHASIRAMIAAKDA-AVAEQVIIQYGGSVKPENAEAYFAQPDIDGALVGGASLDAKSFAAIAKAAAK 253          
The following BLAST results are available for this feature:
BLAST of EY756590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_TREPS5.302e-1746.49Triosephosphate isomerase OS=Treponema pallidum su... [more]
TPIS_TREPA5.302e-1746.49Triosephosphate isomerase OS=Treponema pallidum GN... [more]
TPIS_STRPG5.302e-1746.73Triosephosphate isomerase OS=Streptococcus pyogene... [more]
TPIS_STRP65.302e-1746.73Triosephosphate isomerase OS=Streptococcus pyogene... [more]
TPIS_LEPBP5.302e-1745.76Triosephosphate isomerase OS=Leptospira biflexa se... [more]
TPIS_LEPBA5.302e-1745.76Triosephosphate isomerase OS=Leptospira biflexa se... [more]
TPIS_CLOTH5.302e-1748.11Triosephosphate isomerase OS=Clostridium thermocel... [more]
TPIS_BRAJA5.302e-1744.25Triosephosphate isomerase OS=Bradyrhizobium japoni... [more]
TPIS_BACST5.302e-1745.69Triosephosphate isomerase OS=Bacillus stearothermo... [more]
TPIS_VIBVY6.925e-1743.59Triosephosphate isomerase OS=Vibrio vulnificus (st... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756590 ID=EY756590; Name=EY756590; organism=Citrus sinensis; type=EST; length=574bp
TTCCGTCGACCCACGCGTCCGGCAGGATCTACTCTGGATGTTGTTGCTGC
ACAAACTAAAGCAATCGCAGATCGAGTCTCAAGCTGTTCAACCATTGTTT
TGGCCTATGAACCTGTGTGGGCTATTGGAACTGGGAAGGTTGCCACTCCA
GCGCAGGCTCAAGAAGTACATTTTGAACTGAGGAAATGGCTTTTTGCAAA
CACCAGTCCTGAAATTGCTGCAGCAACACGGATCATCTACGGAGGATCCG
TAAATGGTGCAAACTGCAAGGAATTGGCTGCACAGCCTGATGTTGACGGA
TTTTTGGTTGGTGGTGCTTCGTTGAAGCCGGAGTTCATTGACATCATCAA
ATCTGCTGAGCTGAAGTAAAATTCTTGAGCTTTATTTCAAGGGCAGTTTG
CTGATGAAGTATTTACTGTTTGTGGATATATAGAATACGTTTGGTATAAT
TTCAGAATTACTTTTGTTTTTGATAAGCGCGACCAACTGAAACCTTTTTT
TAAACTTTTTTAATTATCTTTGTTTCCTAAGTGTTGGAGTTGAATAAGTC
TTATGTAGTGTTTACCTGCNNNNN
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