EY756590

Overview
NameEY756590
Unique NameEY756590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_VIBVU (Triosephosphate isomerase OS=Vibrio vulnificus GN=tpiA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.925e-17
Identity = 51/117 (43.59%), Postives = 65/117 (55.56%), Query Frame = 1
Query:   22 AGSTLDVVAAQTKAIADR--VSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAELK 366
            AG T  V A Q  A+ D   V + +  ++AYEP+WAIGTGK AT   AQ +H  +R  + A  +  +A    I YGGSV   N +   AQPD+DG LVGGASL  +    I  A  K
Sbjct:  138 AGETEAVCARQINAVIDAYGVEALNGAIIAYEPIWAIGTGKAATAEDAQRIHASIRAMIAAKDA-AVAEQVIIQYGGSVKPENAEAYFAQPDIDGALVGGASLDAKSFAAIAKAAAK 253          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_STRTD (Triosephosphate isomerase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=tpiA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.925e-17
Identity = 51/119 (42.86%), Postives = 70/119 (58.82%), Query Frame = 1
Query:   13 TRPAGSTLDVVAAQTKAIADRVS--SCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 351
            T  AG   + V AQ  A    ++    ++ V+AYEP+WAIGTGK A+   AQ++   +R  + A+   E+A   R++YGGSV   N  E  A PDVDG LVGGASL+PE     +D +K
Sbjct:  134 TYEAGKAAEFVGAQVSAALAGLTPEQVASSVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVLYGGSVKPENVAEYMACPDVDGALVGGASLEPESFLALLDFVK 252          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_STRT2 (Triosephosphate isomerase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=tpiA PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 6.925e-17
Identity = 51/119 (42.86%), Postives = 70/119 (58.82%), Query Frame = 1
Query:   13 TRPAGSTLDVVAAQTKAIADRVS--SCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 351
            T  AG   + V AQ  A    ++    ++ V+AYEP+WAIGTGK A+   AQ++   +R  + A+   E+A   R++YGGSV   N  E  A PDVDG LVGGASL+PE     +D +K
Sbjct:  134 TYEAGKAAEFVGAQVSAALAGLTPEQVASSVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVLYGGSVKPENVAEYMACPDVDGALVGGASLEPESFLALLDFVK 252          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_STRT1 (Triosephosphate isomerase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=tpiA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.925e-17
Identity = 51/119 (42.86%), Postives = 70/119 (58.82%), Query Frame = 1
Query:   13 TRPAGSTLDVVAAQTKAIADRVS--SCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 351
            T  AG   + V AQ  A    ++    ++ V+AYEP+WAIGTGK A+   AQ++   +R  + A+   E+A   R++YGGSV   N  E  A PDVDG LVGGASL+PE     +D +K
Sbjct:  134 TYEAGKAAEFVGAQVSAALAGLTPEQVASSVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVLYGGSVKPENVAEYMACPDVDGALVGGASLEPESFLALLDFVK 252          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_STRP8 (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M18 GN=tpiA PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 6.925e-17
Identity = 50/109 (45.87%), Postives = 66/109 (60.55%), Query Frame = 1
Query:   13 TRPAGSTLDVVAAQTKAIADRVSS--CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 333
            T  AG   + V AQ  A    +S+   +++VLAYEP+WAIGTGK AT   AQ +   +R  + A+   E+A   R+ YGGSV   N K+  A PDVDG LVGGASL+ +
Sbjct:  134 TYEAGKAAEFVGAQVSAALAGLSAEQVASLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLEAD 242          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_RALEJ (Triosephosphate isomerase OS=Ralstonia eutropha (strain JMP134) GN=tpiA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.925e-17
Identity = 53/108 (49.07%), Postives = 63/108 (58.33%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVS--SCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 333
            R AG T  VV  Q +A  D +S      +VLAYEPVWAIGTGK A+  QAQ VH  LR  +       +A    I+YGGSV   N  EL +  D+DG L+GGASLK E
Sbjct:  131 REAGETEVVVGRQLQAALDALSVEQLGRVVLAYEPVWAIGTGKTASSEQAQAVHAFLRAEV-RERDAGVADRMAILYGGSVKPDNAAELFSMSDIDGGLIGGASLKSE 237          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_THEPX (Triosephosphate isomerase OS=Thermoanaerobacter sp. (strain X514) GN=tpiA PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.044e-17
Identity = 50/105 (47.62%), Postives = 61/105 (58.10%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVS--SCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 324
            R  G T +VV +QTK     V+      +V+AYEP+WAIGTGK AT   A EV   +R  + +    E A   RI YGGSV   N  EL A+ D+DG LVGGASL
Sbjct:  133 REEGKTFEVVLSQTKEALKGVTHDDIVNVVIAYEPIWAIGTGKTATAKDANEVIKAIRNTIASLYGKEKADLVRIQYGGSVKPENISELMAESDIDGALVGGASL 237          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_ALKOO (Triosephosphate isomerase OS=Alkaliphilus oremlandii (strain OhILAs) GN=tpiA PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.044e-17
Identity = 50/114 (43.86%), Postives = 66/114 (57.89%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRV--SSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDII 348
            R A  T DV+  Q     + V   +   +VLAYEP+WAIGTGK A+  +AQ V   +R  +      +I+   RI YGGSV  +N  E+  + D+DG LVGGASLK  EF+ II
Sbjct:  133 REANQTFDVIKKQLLGAFEGVPAEAMDNVVLAYEPIWAIGTGKTASSEEAQTVIAYIRSLIEEKYGVDISEEVRIQYGGSVKASNATEIMNETDIDGALVGGASLKAEEFLGII 246          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_VIBCH (Triosephosphate isomerase OS=Vibrio cholerae GN=tpiA PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.181e-16
Identity = 53/115 (46.09%), Postives = 65/115 (56.52%), Query Frame = 1
Query:   22 AGSTLDVVAAQTKAIADR--VSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 357
            AG T  V A Q  A+ D   V + +  ++AYEP+WAIGTGK AT   AQ +H  +R  L A     +A    I YGGSV   N     AQPD+DG LVGGASL  + F  I K+A
Sbjct:  138 AGETEAVCARQINAVIDAYGVEALNGAIIAYEPIWAIGTGKAATADDAQRIHASIRA-LIAAKDAAVAEQVIIQYGGSVKPENAASYFAQPDIDGALVGGASLDAKGFAAIAKAA 251          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_DEHSC (Triosephosphate isomerase OS=Dehalococcoides sp. (strain CBDB1) GN=tpiA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.181e-16
Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = 1
Query:   25 GSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 357
            G T  V+  Q K   D ++  S I++AYEP+WAIGTGK AT ++A      +R+ L        A  + I+YGGSVN  N  E+ +Q ++DG LVGGASLK E F+ I + A
Sbjct:  136 GQTRQVLETQLKEALDGLN-LSCIIIAYEPIWAIGTGKAATASEANSAIGYIRRVLGDTLGNAAAQTSPILYGGSVNEKNITEILSQTNIDGALVGGASLKAESFVSICRQA 246          
The following BLAST results are available for this feature:
BLAST of EY756590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_VIBVU6.925e-1743.59Triosephosphate isomerase OS=Vibrio vulnificus GN=... [more]
TPIS_STRTD6.925e-1742.86Triosephosphate isomerase OS=Streptococcus thermop... [more]
TPIS_STRT26.925e-1742.86Triosephosphate isomerase OS=Streptococcus thermop... [more]
TPIS_STRT16.925e-1742.86Triosephosphate isomerase OS=Streptococcus thermop... [more]
TPIS_STRP86.925e-1745.87Triosephosphate isomerase OS=Streptococcus pyogene... [more]
TPIS_RALEJ6.925e-1749.07Triosephosphate isomerase OS=Ralstonia eutropha (s... [more]
TPIS_THEPX9.044e-1747.62Triosephosphate isomerase OS=Thermoanaerobacter sp... [more]
TPIS_ALKOO9.044e-1743.86Triosephosphate isomerase OS=Alkaliphilus oremland... [more]
TPIS_VIBCH1.181e-1646.09Triosephosphate isomerase OS=Vibrio cholerae GN=tp... [more]
TPIS_DEHSC1.181e-1643.75Triosephosphate isomerase OS=Dehalococcoides sp. (... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756590 ID=EY756590; Name=EY756590; organism=Citrus sinensis; type=EST; length=574bp
TTCCGTCGACCCACGCGTCCGGCAGGATCTACTCTGGATGTTGTTGCTGC
ACAAACTAAAGCAATCGCAGATCGAGTCTCAAGCTGTTCAACCATTGTTT
TGGCCTATGAACCTGTGTGGGCTATTGGAACTGGGAAGGTTGCCACTCCA
GCGCAGGCTCAAGAAGTACATTTTGAACTGAGGAAATGGCTTTTTGCAAA
CACCAGTCCTGAAATTGCTGCAGCAACACGGATCATCTACGGAGGATCCG
TAAATGGTGCAAACTGCAAGGAATTGGCTGCACAGCCTGATGTTGACGGA
TTTTTGGTTGGTGGTGCTTCGTTGAAGCCGGAGTTCATTGACATCATCAA
ATCTGCTGAGCTGAAGTAAAATTCTTGAGCTTTATTTCAAGGGCAGTTTG
CTGATGAAGTATTTACTGTTTGTGGATATATAGAATACGTTTGGTATAAT
TTCAGAATTACTTTTGTTTTTGATAAGCGCGACCAACTGAAACCTTTTTT
TAAACTTTTTTAATTATCTTTGTTTCCTAAGTGTTGGAGTTGAATAAGTC
TTATGTAGTGTTTACCTGCNNNNN
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