EY756590

Overview
NameEY756590
Unique NameEY756590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_DESVH (Triosephosphate isomerase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=tpiA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.015e-16
Identity = 53/107 (49.53%), Postives = 65/107 (60.75%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTK---AIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 327
            R AG   DV+A Q +   A  D      ++V+AYEPVWAIGTGKVA PA+  E H  +R  L A    +  AA RI+YGGSV   N  EL +  +VDG LVGGASL+
Sbjct:  136 REAGRLEDVLAHQLQVGLADVDATYVPQSLVVAYEPVWAIGTGKVAGPAEVVEAHALVRSLLEARYGRD-GAAIRILYGGSVKPDNAAELLSLDNVDGLLVGGASLQ 241          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_BORHD (Triosephosphate isomerase OS=Borrelia hermsii (strain DAH) GN=tpiA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.015e-16
Identity = 53/114 (46.49%), Postives = 68/114 (59.65%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKA--IADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDII 348
            R    TLDVV  Q +   ++   S    I+LAYEPVWAIGTGK AT  +AQEVH  +R  + +  S   A    I YGGSVN  N   L  + D+DG L+GGASLK + F++I+
Sbjct:  136 RENNKTLDVVLNQIRRGLMSVSESDLKRIILAYEPVWAIGTGKTATKEEAQEVHRAIRLEIESLYSTSAADDIIIQYGGSVNVDNVGGLMGENDIDGALIGGASLKADSFLNIV 249          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_THETN (Triosephosphate isomerase OS=Thermoanaerobacter tengcongensis GN=tpiA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.631e-16
Identity = 51/108 (47.22%), Postives = 60/108 (55.56%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSS--CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 333
            R  G T DVV  QT+     VS    + +V+AYEPVWAIGTGK ATP  A EV   +R  +      + A   RI YGGSV   N     A+ D+DG LVGGASL  E
Sbjct:  133 REEGKTYDVVLTQTREALKGVSEEDITKVVIAYEPVWAIGTGKNATPQDANEVIKAIRNTIAELYGKDKAEMVRIQYGGSVKPDNISGFMAESDIDGALVGGASLVAE 240          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_MYCS5 (Triosephosphate isomerase OS=Mycoplasma synoviae (strain 53) GN=tpiA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.437e-16
Identity = 53/110 (48.18%), Postives = 71/110 (64.55%), Query Frame = 1
Query:   22 AGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDII 348
            AG T +VV AQ  A    +   + +++AYEP+WAIGTGKVAT   AQ+V     K++   TS +    T + YGGSVN  N  EL++Q D+DGFLVGGASLK  +F D++
Sbjct:  139 AGKTKEVVKAQLAASLKDLD-VTKVIVAYEPIWAIGTGKVATAQIAQDVC----KYIKELTSKQ----TVVQYGGSVNAKNIFELSSQEDIDGFLVGGASLKATDFSDLM 239          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_DICT6 (Triosephosphate isomerase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=tpiA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.437e-16
Identity = 51/116 (43.97%), Postives = 68/116 (58.62%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVS--SCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKS 354
            R  G T +V+  Q +   + +   +   IV+AYEPVWAIGTG  A    A EV   +RK +      E++   RI YGGSVN  N  E  +Q ++DG LVGGASLKP+ F +I+KS
Sbjct:  134 RERGKTEEVITKQVREGLEGLEKENVEKIVIAYEPVWAIGTGHSAKGEDANEVAGLIRKIISEMYDTEVSQKIRIQYGGSVNPQNITEFLSQNEIDGALVGGASLKPQSFWNIVKS 249          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_XANP2 (Triosephosphate isomerase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=tpiA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.489e-16
Identity = 50/114 (43.86%), Postives = 63/114 (55.26%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKS 354
            R AG  + VV  Q         + S +V+AYEPVWAIGTG+  TP     +H  +R  L +    E A   RI+YGGSV   N   L A  DVDG LVGGASLK  +F+ I ++
Sbjct:  138 RDAGEAVGVVTRQVHQSLPEGCTASNLVIAYEPVWAIGTGRTPTPEDVANIHGTIRSVLRSQFGAE-ADGIRILYGGSVKPDNAATLMAVADVDGALVGGASLKAADFLAIARA 250          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_EXIS2 (Triosephosphate isomerase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=tpiA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.489e-16
Identity = 46/84 (54.76%), Postives = 53/84 (63.10%), Query Frame = 1
Query:   76 VSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 327
            V     +V+AYEPVWAIGTGK AT   AQ+    +R  + A    E A A RI YGGSV   N KE  AQPD+DG LVGGASL+
Sbjct:  156 VDQVKNLVVAYEPVWAIGTGKSATEQDAQDSCKFVRDVIAAEFGTEAAEAVRIQYGGSVKPDNIKEYMAQPDIDGALVGGASLE 239          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_ACIBY (Triosephosphate isomerase OS=Acinetobacter baumannii (strain AYE) GN=tpiA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.489e-16
Identity = 52/117 (44.44%), Postives = 70/117 (59.83%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSS---CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKS 354
            R  G    VV  Q   IA  V++    + +V+AYEP+WAIGTGK A+P  AQ +H ++R+ L   T     +   I+YGGSV   N  ELAA PD++G LVGGASLK   F  I+++
Sbjct:  145 REQGQAEQVVLQQICDIAPVVTAEQWQNQVVIAYEPIWAIGTGKTASPQDAQAMHAKIREGLCQLT--PAGSNIAILYGGSVKAENAVELAACPDINGALVGGASLKAASFYQIVQA 259          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_ACIB5 (Triosephosphate isomerase OS=Acinetobacter baumannii (strain AB0057) GN=tpiA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.489e-16
Identity = 52/117 (44.44%), Postives = 70/117 (59.83%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSS---CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKS 354
            R  G    VV  Q   IA  V++    + +V+AYEP+WAIGTGK A+P  AQ +H ++R+ L   T     +   I+YGGSV   N  ELAA PD++G LVGGASLK   F  I+++
Sbjct:  145 REQGQAEQVVLQQICDIAPVVTAEQWQNQVVIAYEPIWAIGTGKTASPQDAQAMHAKIREGLCQLT--PAGSNIAILYGGSVKAENAVELAACPDINGALVGGASLKAASFYQIVQA 259          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_ACIB3 (Triosephosphate isomerase OS=Acinetobacter baumannii (strain AB307-0294) GN=tpiA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.489e-16
Identity = 52/117 (44.44%), Postives = 70/117 (59.83%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSS---CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKS 354
            R  G    VV  Q   IA  V++    + +V+AYEP+WAIGTGK A+P  AQ +H ++R+ L   TS    +   I+YGGSV   N  ELAA PD++G LVGGASL    F  I+++
Sbjct:  145 REQGQAEQVVLQQICDIAPVVTAEQWQNQVVIAYEPIWAIGTGKTASPQDAQAMHAKIREGLCQLTS--AGSNIAILYGGSVKAENAVELAACPDINGALVGGASLNAASFYQIVQA 259          
The following BLAST results are available for this feature:
BLAST of EY756590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_DESVH2.015e-1649.53Triosephosphate isomerase OS=Desulfovibrio vulgari... [more]
TPIS_BORHD2.015e-1646.49Triosephosphate isomerase OS=Borrelia hermsii (str... [more]
TPIS_THETN2.631e-1647.22Triosephosphate isomerase OS=Thermoanaerobacter te... [more]
TPIS_MYCS53.437e-1648.18Triosephosphate isomerase OS=Mycoplasma synoviae (... [more]
TPIS_DICT63.437e-1643.97Triosephosphate isomerase OS=Dictyoglomus thermoph... [more]
TPIS_XANP24.489e-1643.86Triosephosphate isomerase OS=Xanthobacter autotrop... [more]
TPIS_EXIS24.489e-1654.76Triosephosphate isomerase OS=Exiguobacterium sibir... [more]
TPIS_ACIBY4.489e-1644.44Triosephosphate isomerase OS=Acinetobacter baumann... [more]
TPIS_ACIB54.489e-1644.44Triosephosphate isomerase OS=Acinetobacter baumann... [more]
TPIS_ACIB34.489e-1644.44Triosephosphate isomerase OS=Acinetobacter baumann... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756590 ID=EY756590; Name=EY756590; organism=Citrus sinensis; type=EST; length=574bp
TTCCGTCGACCCACGCGTCCGGCAGGATCTACTCTGGATGTTGTTGCTGC
ACAAACTAAAGCAATCGCAGATCGAGTCTCAAGCTGTTCAACCATTGTTT
TGGCCTATGAACCTGTGTGGGCTATTGGAACTGGGAAGGTTGCCACTCCA
GCGCAGGCTCAAGAAGTACATTTTGAACTGAGGAAATGGCTTTTTGCAAA
CACCAGTCCTGAAATTGCTGCAGCAACACGGATCATCTACGGAGGATCCG
TAAATGGTGCAAACTGCAAGGAATTGGCTGCACAGCCTGATGTTGACGGA
TTTTTGGTTGGTGGTGCTTCGTTGAAGCCGGAGTTCATTGACATCATCAA
ATCTGCTGAGCTGAAGTAAAATTCTTGAGCTTTATTTCAAGGGCAGTTTG
CTGATGAAGTATTTACTGTTTGTGGATATATAGAATACGTTTGGTATAAT
TTCAGAATTACTTTTGTTTTTGATAAGCGCGACCAACTGAAACCTTTTTT
TAAACTTTTTTAATTATCTTTGTTTCCTAAGTGTTGGAGTTGAATAAGTC
TTATGTAGTGTTTACCTGCNNNNN
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