EY756590

Overview
NameEY756590
Unique NameEY756590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_STRR6 (Triosephosphate isomerase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=tpiA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.465e-15
Identity = 49/119 (41.18%), Postives = 67/119 (56.30%), Query Frame = 1 
Query:   13 TRPAGSTLDVVAAQTKAIADRVSS--CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 351
            T  AG   + V AQ  A    +++   +  V+AYEP+WAIGTGK A+   AQ++   +R  + A+   E+A   R+ YGGSV   N     A PDVDG LVGGASL+ E     +D +K
Sbjct:  134 TYEAGKAAEFVGAQVSAALAGLTAEQVAASVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVQYGGSVKPENVASYMACPDVDGALVGGASLEAESFLALLDFVK 252
[Close]
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_STRPN (Triosephosphate isomerase OS=Streptococcus pneumoniae GN=tpiA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.465e-15
Identity = 49/119 (41.18%), Postives = 67/119 (56.30%), Query Frame = 1 
Query:   13 TRPAGSTLDVVAAQTKAIADRVSS--CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 351
            T  AG   + V AQ  A    +++   +  V+AYEP+WAIGTGK A+   AQ++   +R  + A+   E+A   R+ YGGSV   N     A PDVDG LVGGASL+ E     +D +K
Sbjct:  134 TYEAGKAAEFVGAQVSAALAGLTAEQVAASVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVQYGGSVKPENVASYMACPDVDGALVGGASLEAESFLALLDFVK 252
[Close]
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_STRPI (Triosephosphate isomerase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=tpiA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.465e-15
Identity = 49/119 (41.18%), Postives = 67/119 (56.30%), Query Frame = 1 
Query:   13 TRPAGSTLDVVAAQTKAIADRVSS--CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 351
            T  AG   + V AQ  A    +++   +  V+AYEP+WAIGTGK A+   AQ++   +R  + A+   E+A   R+ YGGSV   N     A PDVDG LVGGASL+ E     +D +K
Sbjct:  134 TYEAGKAAEFVGAQVSAALAGLTAEQVAASVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVQYGGSVKPENVASYMACPDVDGALVGGASLEAESFLALLDFVK 252
[Close]
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_STRP4 (Triosephosphate isomerase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=tpiA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.465e-15
Identity = 49/119 (41.18%), Postives = 67/119 (56.30%), Query Frame = 1 
Query:   13 TRPAGSTLDVVAAQTKAIADRVSS--CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 351
            T  AG   + V AQ  A    +++   +  V+AYEP+WAIGTGK A+   AQ++   +R  + A+   E+A   R+ YGGSV   N     A PDVDG LVGGASL+ E     +D +K
Sbjct:  134 TYEAGKAAEFVGAQVSAALAGLTAEQVAASVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVQYGGSVKPENVASYMACPDVDGALVGGASLEAESFLALLDFVK 252
[Close]
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_STRP2 (Triosephosphate isomerase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=tpiA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.465e-15
Identity = 49/119 (41.18%), Postives = 67/119 (56.30%), Query Frame = 1 
Query:   13 TRPAGSTLDVVAAQTKAIADRVSS--CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 351
            T  AG   + V AQ  A    +++   +  V+AYEP+WAIGTGK A+   AQ++   +R  + A+   E+A   R+ YGGSV   N     A PDVDG LVGGASL+ E     +D +K
Sbjct:  134 TYEAGKAAEFVGAQVSAALAGLTAEQVAASVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVQYGGSVKPENVASYMACPDVDGALVGGASLEAESFLALLDFVK 252
[Close]
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_JANSC (Triosephosphate isomerase OS=Jannaschia sp. (strain CCS1) GN=tpiA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.465e-15
Identity = 48/104 (46.15%), Postives = 61/104 (58.65%), Query Frame = 1 
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 327
            R A  TL+VV++Q        ++ + IV+AYEPVWAIGTG+  T  Q  EVH  +R  L A      A    ++YGGSV   N  E+ A  +VDG LVGGASLK
Sbjct:  132 RDANVTLNVVSSQLAGSIPTGATPAQIVVAYEPVWAIGTGRTPTLEQIAEVHDHIRSELAARRG-SAANDIPLLYGGSVKPGNAAEIFAVSNVDGALVGGASLK 234
[Close]
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_DESVM (Triosephosphate isomerase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=tpiA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.465e-15
Identity = 43/82 (52.44%), Postives = 54/82 (65.85%), Query Frame = 1 
Query:   88 STIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 333
            + I +AYEPVWAIGTGKVA P +  E H  +R+ L A    E   A RI+YGGSV   N +E+ A  +VDG LVGGASL+ +
Sbjct:  163 AAIAVAYEPVWAIGTGKVAGPPEIVEAHALVRQLLVARFG-EGGVAVRILYGGSVKPENAREIIALDNVDGVLVGGASLQAD 243
[Close]
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_ALKMQ (Triosephosphate isomerase OS=Alkaliphilus metalliredigens (strain QYMF) GN=tpiA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.465e-15
Identity = 47/114 (41.23%), Postives = 63/114 (55.26%), Query Frame = 1 
Query:   16 RPAGSTLDVVAAQTKAIADRV--SSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDII 348
            R A  T DV+  Q     + +   S   IV+AYEP+WAIGTGK A+   A  V   +R+ +       I+   RI YGGSV   N  E+  + D+DG LVGGASLK + F+ I+
Sbjct:  133 REAAQTFDVIKNQITIDLEGILPDSMKDIVIAYEPIWAIGTGKTASSQDANHVIAYIRQLIQEKYDDGISETVRIQYGGSVKPENATEIMNEEDIDGALVGGASLKADAFLGIV 246
[Close]
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_XANFL (Triosephosphate isomerase OS=Xanthobacter flavus GN=tpiA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.106e-14
Identity = 48/114 (42.11%), Postives = 63/114 (55.26%), Query Frame = 1 
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKS 354
            R AG    VV  Q +      ++  ++V+AYEP+WAIGTG+  T     EVH  +R  L      E A   RI+YGGSV   N   L A  +VDG LVGGASLK  +F+ I ++
Sbjct:  135 RDAGEAAAVVTRQVRQSVPEGATAVSLVIAYEPIWAIGTGRTPTTDDVAEVHGAIRHILAERFGAE-ANGIRILYGGSVKPDNAAALLATANVDGALVGGASLKAADFLAIARA 247
[Close]
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_THEYD (Triosephosphate isomerase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=tpiA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.106e-14
Identity = 47/113 (41.59%), Postives = 65/113 (57.52%), Query Frame = 1 
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDIIK 351
            R    T++++  Q +     ++S   + +AYEPVWAIGTG VAT  Q ++ H  +R  L      E A   RI+YGGSV   N K + A  +V+G LVGGASL P +F  I+K
Sbjct:  134 RQNNKTMEILKTQIRNGLLEINSPEALTIAYEPVWAIGTGVVATEEQIKQSHLFIRNQL-KEIYGERANEVRILYGGSVTPENIKSIMAIDNVEGVLVGGASLDPLKFAKIVK 245
The following BLAST results are available for this feature:
BLAST of EY756590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_STRR68.465e-1541.18Triosephosphate isomerase OS=Streptococcus pneumon... [more]
TPIS_STRPN8.465e-1541.18Triosephosphate isomerase OS=Streptococcus pneumon... [more]
TPIS_STRPI8.465e-1541.18Triosephosphate isomerase OS=Streptococcus pneumon... [more]
TPIS_STRP48.465e-1541.18Triosephosphate isomerase OS=Streptococcus pneumon... [more]
TPIS_STRP28.465e-1541.18Triosephosphate isomerase OS=Streptococcus pneumon... [more]
TPIS_JANSC8.465e-1546.15Triosephosphate isomerase OS=Jannaschia sp. (strai... [more]
TPIS_DESVM8.465e-1552.44Triosephosphate isomerase OS=Desulfovibrio vulgari... [more]
TPIS_ALKMQ8.465e-1541.23Triosephosphate isomerase OS=Alkaliphilus metallir... [more]
TPIS_XANFL1.106e-1442.11Triosephosphate isomerase OS=Xanthobacter flavus G... [more]
TPIS_THEYD1.106e-1441.59Triosephosphate isomerase OS=Thermodesulfovibrio y... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756590 ID=EY756590; Name=EY756590; organism=Citrus sinensis; type=EST; length=574bp
TTCCGTCGACCCACGCGTCCGGCAGGATCTACTCTGGATGTTGTTGCTGC
ACAAACTAAAGCAATCGCAGATCGAGTCTCAAGCTGTTCAACCATTGTTT
TGGCCTATGAACCTGTGTGGGCTATTGGAACTGGGAAGGTTGCCACTCCA
GCGCAGGCTCAAGAAGTACATTTTGAACTGAGGAAATGGCTTTTTGCAAA
CACCAGTCCTGAAATTGCTGCAGCAACACGGATCATCTACGGAGGATCCG
TAAATGGTGCAAACTGCAAGGAATTGGCTGCACAGCCTGATGTTGACGGA
TTTTTGGTTGGTGGTGCTTCGTTGAAGCCGGAGTTCATTGACATCATCAA
ATCTGCTGAGCTGAAGTAAAATTCTTGAGCTTTATTTCAAGGGCAGTTTG
CTGATGAAGTATTTACTGTTTGTGGATATATAGAATACGTTTGGTATAAT
TTCAGAATTACTTTTGTTTTTGATAAGCGCGACCAACTGAAACCTTTTTT
TAAACTTTTTTAATTATCTTTGTTTCCTAAGTGTTGGAGTTGAATAAGTC
TTATGTAGTGTTTACCTGCNNNNN
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