EY756590

Overview
NameEY756590
Unique NameEY756590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4526 contig Csv1_Contig4526:459..1031. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_CHLPN (Triosephosphate isomerase OS=Chlamydia pneumoniae GN=tpiA PE=3 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.886e-14
Identity = 44/114 (38.60%), Postives = 63/114 (55.26%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKS 354
            R  G    V+  Q     +++ + S  ++AYEPVWAIGTGKVA  +  Q++H   R+ +    S   A    I+YGGSV   N +      DVDG LVGGASL+ + F ++ K+
Sbjct:  138 REEGKAHQVIKKQLLLGLEQMDNGSEFLIAYEPVWAIGTGKVAEASDVQDIHMFCREVVAERFSEATAEEISILYGGSVKVDNAQRFGQCSDVDGLLVGGASLEGQSFFEVAKN 251          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_MYCHR (Triosephosphate isomerase OS=Mycoplasma hyorhinis GN=tpiA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.463e-14
Identity = 49/110 (44.55%), Postives = 66/110 (60.00%), Query Frame = 1
Query:   22 AGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDII 348
            A  T  V+  Q K     V   S +++AYEP+WAIGTGK ATP QAQ+V   +RK    N +        I+YGGSV+  N ++L  Q D++G LVGGASLK + FI ++
Sbjct:  139 AQKTSQVIEYQLKNSLKDVD-LSKVIVAYEPIWAIGTGKTATPEQAQQVCKFIRKQTNKNLT--------ILYGGSVSQENIEQLLNQADINGALVGGASLKVDSFIKLL 239          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_BARHE (Triosephosphate isomerase OS=Bartonella henselae GN=tpiA PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.463e-14
Identity = 42/104 (40.38%), Postives = 59/104 (56.73%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 327
            R +   LDV+  Q +      ++   I++AYEPVWA+GTG  AT A   EVH  +   + +    E  A  R++YGGSV  +N  EL +   V+G L+GGASLK
Sbjct:  138 RKSNKVLDVLTRQLEGSLPDGATAENIIIAYEPVWAVGTGNTATSADVAEVHAFIHHKMHSRFGDE-GAKIRLLYGGSVKPSNAFELLSTAHVNGALIGGASLK 240          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_ANOFW (Triosephosphate isomerase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=tpiA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.463e-14
Identity = 45/118 (38.14%), Postives = 68/118 (57.63%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSS--CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 360
            R +  T +VV  Q +   + ++      +V+AYEP+WAIGTGK +T   A  V   +R+ +    S E A A RI YGGSV   N     A+  +DG LVGGASL+P+ F+ ++++ +
Sbjct:  134 RESNRTNEVVRVQVEKALEGLTEEQVKQVVIAYEPIWAIGTGKSSTAEDANNVCGYIRQVIANKFSQEAANAVRIQYGGSVKPENIAAFLAEEHIDGALVGGASLQPQSFLQLVEAGK 251          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_OLICO (Triosephosphate isomerase OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=tpiA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.201e-14
Identity = 43/107 (40.19%), Postives = 59/107 (55.14%), Query Frame = 1
Query:    7 RPTRPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 327
            R  R AG   +VV  Q        +  + +V+AYEPVWAIGTG   T    +E+H  +R+ L      E     R++YGGS+  AN  E+ A  +V+G L+GGASLK
Sbjct:  134 RAERDAGRAAEVVGRQLDGSVPDGARAANLVVAYEPVWAIGTGLTPTSQDIEEIHAVIRQNLTGRFKAE-GEGVRLLYGGSLKPANAAEILALANVNGGLIGGASLK 239          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_MYCPU (Triosephosphate isomerase OS=Mycoplasma pulmonis GN=tpiA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.201e-14
Identity = 51/116 (43.97%), Postives = 71/116 (61.21%), Query Frame = 1
Query:   22 AGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAELK 366
            AG T  V+  Q K   + +   S IV+AYEP+WAIGTGKVAT   AQ++     K++ + TS ++     I YGGSV+ +N + L  Q D+DG LVGGASL+ + F ++I    LK
Sbjct:  142 AGKTKAVIKKQIKQSLEALD-LSKIVVAYEPIWAIGTGKVATAEVAQQI----CKFIRSITSKDLI----IQYGGSVSPSNIENLMKQEDIDGALVGGASLEVDSFFELITFNALK 248          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_AYWBP (Triosephosphate isomerase OS=Aster yellows witches'-broom phytoplasma (strain AYWB) GN=tpiA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.201e-14
Identity = 39/80 (48.75%), Postives = 54/80 (67.50%), Query Frame = 1
Query:   94 IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 333
            +++AYEPVWAIGTGK A P  A +   ++R+ + A  S + + A RIIYGGS++ AN K +  QP +DG L G ASL+ E
Sbjct:  165 MIIAYEPVWAIGTGKSANPQDANKTIEQIREKVTALYSFQASCAIRIIYGGSLSVANIKSILEQPAIDGILAGKASLQTE 244          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_NEIMB (Triosephosphate isomerase OS=Neisseria meningitidis serogroup B GN=tpiA PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 5.487e-14
Identity = 48/116 (41.38%), Postives = 65/116 (56.03%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSAE 360
            R AG   +V+A Q   +         I +AYEPVWAIGTGKVAT  Q  ++H  + K + +    ++    R++YGGSV   N  ++ A P VDG LVGGASL    F  II +A+
Sbjct:  138 REAGKEHEVIAHQLSILQGL--DTKNIAVAYEPVWAIGTGKVATVEQIADMHAFIYKEILSLCGSDVKI--RVLYGGSVKADNAADIFAVPYVDGALVGGASLSYDSFTAIISAAQ 249          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_NEIMA (Triosephosphate isomerase OS=Neisseria meningitidis serogroup A GN=tpiA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.487e-14
Identity = 48/116 (41.38%), Postives = 65/116 (56.03%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSAE 360
            R AG   +V+A Q   +         I +AYEPVWAIGTGKVAT  Q  ++H  + K + +    ++    R++YGGSV   N  ++ A P VDG LVGGASL    F  II +A+
Sbjct:  138 REAGKEHEVIAHQLSILQGL--DTKNIAVAYEPVWAIGTGKVATVEQIADMHAFIYKEILSLCGSDVKI--RVLYGGSVKADNAADIFAVPYVDGALVGGASLSYDSFTAIISAAQ 249          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_DEIGD (Triosephosphate isomerase OS=Deinococcus geothermalis (strain DSM 11300) GN=tpiA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.487e-14
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 1
Query:   31 TLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 324
            TLD +   T+ + +       +++AYEPVWAIGTGK AT   A+E+   +R+ L    + E A + RI+YGGSV   N   + AQP+V+G LVGGASL
Sbjct:  141 TLDQLRGSTEGVGEN------LIVAYEPVWAIGTGKTATADDAEELAAAIREALAGLYTAE-ARSFRILYGGSVKPDNIASICAQPNVNGALVGGASL 231          
The following BLAST results are available for this feature:
BLAST of EY756590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_CHLPN1.886e-1438.60Triosephosphate isomerase OS=Chlamydia pneumoniae ... [more]
TPIS_MYCHR2.463e-1444.55Triosephosphate isomerase OS=Mycoplasma hyorhinis ... [more]
TPIS_BARHE2.463e-1440.38Triosephosphate isomerase OS=Bartonella henselae G... [more]
TPIS_ANOFW2.463e-1438.14Triosephosphate isomerase OS=Anoxybacillus flavith... [more]
TPIS_OLICO4.201e-1440.19Triosephosphate isomerase OS=Oligotropha carboxido... [more]
TPIS_MYCPU4.201e-1443.97Triosephosphate isomerase OS=Mycoplasma pulmonis G... [more]
TPIS_AYWBP4.201e-1448.75Triosephosphate isomerase OS=Aster yellows witches... [more]
TPIS_NEIMB5.487e-1441.38Triosephosphate isomerase OS=Neisseria meningitidi... [more]
TPIS_NEIMA5.487e-1441.38Triosephosphate isomerase OS=Neisseria meningitidi... [more]
TPIS_DEIGD5.487e-1444.90Triosephosphate isomerase OS=Deinococcus geotherma... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756590 ID=EY756590; Name=EY756590; organism=Citrus sinensis; type=EST; length=574bp
TTCCGTCGACCCACGCGTCCGGCAGGATCTACTCTGGATGTTGTTGCTGC
ACAAACTAAAGCAATCGCAGATCGAGTCTCAAGCTGTTCAACCATTGTTT
TGGCCTATGAACCTGTGTGGGCTATTGGAACTGGGAAGGTTGCCACTCCA
GCGCAGGCTCAAGAAGTACATTTTGAACTGAGGAAATGGCTTTTTGCAAA
CACCAGTCCTGAAATTGCTGCAGCAACACGGATCATCTACGGAGGATCCG
TAAATGGTGCAAACTGCAAGGAATTGGCTGCACAGCCTGATGTTGACGGA
TTTTTGGTTGGTGGTGCTTCGTTGAAGCCGGAGTTCATTGACATCATCAA
ATCTGCTGAGCTGAAGTAAAATTCTTGAGCTTTATTTCAAGGGCAGTTTG
CTGATGAAGTATTTACTGTTTGTGGATATATAGAATACGTTTGGTATAAT
TTCAGAATTACTTTTGTTTTTGATAAGCGCGACCAACTGAAACCTTTTTT
TAAACTTTTTTAATTATCTTTGTTTCCTAAGTGTTGGAGTTGAATAAGTC
TTATGTAGTGTTTACCTGCNNNNN
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